Carg16202 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16202
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	Carg_Chr06: 2483587 .. 2485828 (-)
RNA-Seq Expression	Carg16202
Synteny	Carg16202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAGAGAAGAATTGATCTTGTTTATGGAGGAGGCAGCGTGGGATTGATGGGTCTTGTTTCTCGAGCTGTTCATGATGGCGGCCGTCATGTTCTAGGGTTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATTTCTTCATAATCTCATCTTCAAATTACAAGACATCATTCATAATTAAGTTGTTTTGGGGTTTTGTTCAAAAAGTTATGATTTTGTTGGAATCCGACAGCTCTATTTGATTATTATTTGTAAATTTTTATGTTTTGGAAGTCAATGAGAACATTCATGGAATGTTGATCTTTGTGTGTTTTTGTTTGTTCTACAGAATAATTCCACGAACCCTAATGCCGGTTGAGGTACATACACCAAAGTTCTAACATTTGTACCATTTGATTTCCTTTGCATGAACTAATGGCTACTATGTTTATGAATTTTGAATATGTTTAGATCACTGGTGGGACTGTTGGAGAAGTCAAACCGGTGTCGGATATGCATCAAAGAAAGGCCGAGATGGCTCGCCAAGCTGATGCTTTCATCGCTTTACCAGGTACTCGTTGATCTCATACGTCGTTCGGTTCAGGTTCGGGTTCAAATTCAGTGAATTTAACTAACTTTGAAATTGAATCATAGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGGATCCATCGCAAGCCAGTGAGTATTAAAAAAAATCTTCATTTTATGTGAATATACTTTGGCTTAACCACCTAAATTCTCGAATTTTGGCTAACAGTGGGATACTGTTAAAACTGTTGGATGATGAAAGTCCGTTAATTTACGGAATGTTCATGGGTTTATAATCAAAGAATACTCCCTCTCCATTAGTATGAGGCTTTTTTGGGGAAGCCGAAAACAAGCCCATAAGAGCTTATGTTCAAAGTGGACAAATTCATACTATTGTGGAGAGTTGTATTAGTCTAACAGAGAAACATTTGGTCTCATCCATAAATGGCATGTTGTGTTTAAGGCATAATGATATAAAATCATAATAGCCATTTCACATGACAAGCATGTTCTAGTTTGGCCCTCCATTTTATAATTATTCCACATGTCTTTTGGAGAACACACCAAAAAAGATCCCATTTTTCAACACCCTTTTGCTTCATAAACAATTTATTCGACCGTAATCATAATCAATAGAGTTCTCGAGTCTATTTAGTCAAATGCTCGATACGGATAACAGTTGGGTCAACTCTCAATCCGAAATCGAGAGACAATAACAATCCTTGGAATAGAATCAAAACATGTGAATGCGAGTCAAGTTGGTAATCATAACGCAATTATTATTATTTTGATGGAAACAAGAGAGGAGGAGATGTTAAATTTAAAAGGCACATTAAATTGGTGGTCAAACAAAGTTGTATGATTAATTATGAAAAAAAATGATATAAAATTTGCACAGGTGGGACTGTTGAATGTGGATGGATACTACAATTCGTTGCTGAGTTTCATCGATAAAACAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCTAAGCTTTTAGTCCAACAACTCGAGGTACTTTTTTCTTTTAATCGTAATAATTTTAAGAGCACAAAACATTTCTTATAAAGTTGTGAAAATTCCTCCCGACAATTTTAAAATCGTGAGGGTAACGGCTATACTGTAACAAAGTAGACAATATCTGCTAGTTGTGGTCTTGGAGTGTAAACTAGGGTTCCACGTAATATATGAATACTAACCCGAGTTTTGAGTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTATAAATGCGACAGGAATACGAACCTAAGTACGACGAGATAATATCACAGTTGGTGTGGGAAGATGTGGACAGGAGGAGTTACGTGGCCGAATCAGAGATTGCCACGTAATACATGTGGTTTTGGTCAAAGTGCTTGATGGAAAAAAAGCGGGGGTGTTTTGTCTTTACTTGGGTATACAATATTTTATAATAAAGATATAATATTATATAAACTTCAACACAGGAACACAGGAACACAGGAACACAGGAACACAGGGAACTATCCCTTTTTTTCCCTTTTCTTTTTATTATTTTCTTGTGGGCATTTATGTATAAATGTTGGCAGTGAAAACAAAAAGAAATTGGGAAAATAAAGGCTTTGTTTATATATATATATATATATA

mRNA sequence

GTGGAGAGAAGAATTGATCTTGTTTATGGAGGAGGCAGCGTGGGATTGATGGGTCTTGTTTCTCGAGCTGTTCATGATGGCGGCCGTCATGTTCTAGGAATAATTCCACGAACCCTAATGCCGGTTGAGATCACTGGTGGGACTGTTGGAGAAGTCAAACCGGTGTCGGATATGCATCAAAGAAAGGCCGAGATGGCTCGCCAAGCTGATGCTTTCATCGCTTTACCAGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGGATCCATCGCAAGCCAGTGGGACTGTTGAATGTGGATGGATACTACAATTCGTTGCTGAGTTTCATCGATAAAACAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCTAAGCTTTTAGTCCAACAACTCGAGGAATACGAACCTAAGTACGACGAGATAATATCACAGTTGGTGTGGGAAGATGTGGACAGGAGGAGTTACGTGGCCGAATCAGAGATTGCCACGTAATACATGTGGTTTTGGTCAAAGTGCTTGATGGAAAAAAAGCGGGGGTGTTTTGTCTTTACTTGGGTATACAATATTTTATAATAAAGATATAATATTATATAAACTTCAACACAGGAACACAGGAACACAGGAACACAGGAACACAGGGAACTATCCCTTTTTTTCCCTTTTCTTTTTATTATTTTCTTGTGGGCATTTATGTATAAATGTTGGCAGTGAAAACAAAAAGAAATTGGGAAAATAAAGGCTTTGTTTATATATATATATATATATA

Coding sequence (CDS)

GTGGAGAGAAGAATTGATCTTGTTTATGGAGGAGGCAGCGTGGGATTGATGGGTCTTGTTTCTCGAGCTGTTCATGATGGCGGCCGTCATGTTCTAGGAATAATTCCACGAACCCTAATGCCGGTTGAGATCACTGGTGGGACTGTTGGAGAAGTCAAACCGGTGTCGGATATGCATCAAAGAAAGGCCGAGATGGCTCGCCAAGCTGATGCTTTCATCGCTTTACCAGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGGATCCATCGCAAGCCAGTGGGACTGTTGAATGTGGATGGATACTACAATTCGTTGCTGAGTTTCATCGATAAAACAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCTAAGCTTTTAGTCCAACAACTCGAGGAATACGAACCTAAGTACGACGAGATAATATCACAGTTGGTGTGGGAAGATGTGGACAGGAGGAGTTACGTGGCCGAATCAGAGATTGCCACGTAA

Protein sequence

VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKTVDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT

Homology

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BLAST of Carg16202 vs. NCBI nr
Match: KAG7028142.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT
Sbjct: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 179

[Close]

BLAST of Carg16202 vs. NCBI nr
Match: XP_022940555.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita moschata] >KAG6596603.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. NCBI nr
Match: XP_023540869.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWED DRRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDGDRRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. NCBI nr
Match: XP_023005654.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita maxima])

HSP 1 Score: 347.8 bits (891), Expect = 5.5e-92
Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMAR+ADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 97  RKAEMARRADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEY+P+YDEIISQLVWED DRRSYVAE EIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYKPEYDEIISQLVWEDADRRSYVAEPEIAT 215

[Close]

BLAST of Carg16202 vs. NCBI nr
Match: XP_038903675.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Benincasa hispida])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 170/179 (94.97%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVS+AVHDGGRHVLGIIPRTLMPVEITG TVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDK 
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAK LV+QLEEY P+YDEI SQLVWEDVDRRSYVAESE+AT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKALVRQLEEYVPEYDEITSQLVWEDVDRRSYVAESEVAT 215

[Close]

BLAST of Carg16202 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2)

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-83
Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVS+AVH GGRHVLG+IP+TLMP EITG T+GEVK V+DMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGVIPKTLMPREITGETIGEVKAVADMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLL+FIDK 
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGF+SP ARRIIVSAP AK LV+QLEEYEP++DEI S+LVW++VDR SYV  SE+AT
Sbjct: 157 VDEGFISPMARRIIVSAPNAKELVRQLEEYEPEFDEITSKLVWDEVDRISYVPGSEVAT 215

[Close]

BLAST of Carg16202 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 134/174 (77.01%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGLVS+AVHDGGRHV+GIIP+TLMP E+TG TVGEV+ V+DMHQ
Sbjct: 42  VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQ 101

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLLSFIDK 
Sbjct: 102 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 161

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAE 175
           V+EGF+SPTAR IIVSAPTAK LV++LEEY P ++ + ++L WE ++R  Y +E
Sbjct: 162 VEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWE-MERIGYSSE 214

[Close]

BLAST of Carg16202 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-71
Identity = 131/174 (75.29%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGLVS+AVHDGGRHV+G+IP+TLMP E+TG TVGEV+ V+DMHQ
Sbjct: 42  VLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQ 101

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMAR +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLLSFIDK 
Sbjct: 102 RKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 161

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAE 175
           V+EGF+S  AR+II+SAPTAK LV++LEEY P ++ + ++L WE ++R  Y +E
Sbjct: 162 VEEGFISTNARQIIISAPTAKELVKKLEEYSPCHESVATKLCWE-IERIDYSSE 214

[Close]

BLAST of Carg16202 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-71
Identity = 130/177 (73.45%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGSVGLMGLVS+AVH+GGRHV+G+IP+TLMP EI+G TVGEVK VSDMHQ
Sbjct: 49  VARNIDLVYGGGSVGLMGLVSQAVHNGGRHVIGVIPKTLMPREISGETVGEVKAVSDMHQ 108

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQ+DAFIALPGGYGTLEELLEVI WAQLGIH KPVGLLNVDGYYN LLSFIDK 
Sbjct: 109 RKAEMARQSDAFIALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKA 168

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEI 178
           V+EGF+ P+AR IIV APT K L+++LEEY P++++++S++ WE +++ SY    +I
Sbjct: 169 VEEGFIRPSARHIIVLAPTPKELIEKLEEYSPQHEKVVSKMKWE-MEQMSYPQNYDI 224

[Close]

BLAST of Carg16202 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-71
Identity = 130/164 (79.27%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGLVS+AV+DGGRHV+G+IP+TLM  EI G TVGEV+PVSDMHQ
Sbjct: 42  VARGIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQ 101

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQ+DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLL+FID+ 
Sbjct: 102 RKAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQA 161

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWE 165
           V+EGF+SP+ARRIIVSAPTA+ L+ +LEEY P +D + S L WE
Sbjct: 162 VEEGFISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLNWE 205

[Close]

BLAST of Carg16202 vs. ExPASy TrEMBL
Match: A0A6J1FQZ0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446119 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.8e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. ExPASy TrEMBL
Match: A0A6J1KZV7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111498592 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMAR+ADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT
Sbjct: 97  RKAEMARRADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLVQQLEEY+P+YDEIISQLVWED DRRSYVAE EIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYKPEYDEIISQLVWEDADRRSYVAEPEIAT 215

[Close]

BLAST of Carg16202 vs. ExPASy TrEMBL
Match: A0A6J1CSQ5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111014230 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.5e-90
Identity = 170/179 (94.97%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVS+AVHDGGRHVLG+IPRTLMPVEITG TVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMPVEITGETVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLL FIDK 
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAKLLV+QLEEY P+YDEI SQLVWEDVDRRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKLLVRQLEEYVPEYDEITSQLVWEDVDRRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. ExPASy TrEMBL
Match: A0A0A0LEQ3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G778430 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88
Identity = 168/179 (93.85%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVS+AVHDGGRHVLGIIPRTLMPVEITG TVGEVKPVSDMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEM RQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLL FIDK 
Sbjct: 97  RKAEMTRQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAK LV+QLEEY P+YDEI SQLVWEDV+RRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKALVRQLEEYVPEYDEITSQLVWEDVERRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. ExPASy TrEMBL
Match: A0A6J1J161 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481749 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 167/179 (93.30%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VER IDLVYGGGSVGLMGLVS+AVHDGGRHVLG+IPRTLM VEITG +VGEVKPVSDMHQ
Sbjct: 37  VERSIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDK 
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGFVSPTARRIIVSAPTAK LV+QLEEY P+YDEI SQLVWEDVDRRSYVAESEIAT
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKALVRQLEEYVPEYDEITSQLVWEDVDRRSYVAESEIAT 215

[Close]

BLAST of Carg16202 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 310.5 bits (794), Expect = 9.1e-85
Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VERRIDLVYGGGSVGLMGLVS+AVH GGRHVLG+IP+TLMP EITG T+GEVK V+DMHQ
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGVIPKTLMPREITGETIGEVKAVADMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLL+FIDK 
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAESEIAT 180
           VDEGF+SP ARRIIVSAP AK LV+QLEEYEP++DEI S+LVW++VDR SYV  SE+AT
Sbjct: 157 VDEGFISPMARRIIVSAPNAKELVRQLEEYEPEFDEITSKLVWDEVDRISYVPGSEVAT 215

[Close]

BLAST of Carg16202 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 274.2 bits (700), Expect = 7.2e-74
Identity = 134/174 (77.01%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGLVS+AVHDGGRHV+GIIP+TLMP E+TG TVGEV+ V+DMHQ
Sbjct: 42  VSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQ 101

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLLSFIDK 
Sbjct: 102 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 161

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAE 175
           V+EGF+SPTAR IIVSAPTAK LV++LEEY P ++ + ++L WE ++R  Y +E
Sbjct: 162 VEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWE-MERIGYSSE 214

[Close]

BLAST of Carg16202 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-72
Identity = 131/174 (75.29%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGLVS+AVHDGGRHV+G+IP+TLMP E+TG TVGEV+ V+DMHQ
Sbjct: 42  VLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQ 101

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMAR +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLLSFIDK 
Sbjct: 102 RKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 161

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWEDVDRRSYVAE 175
           V+EGF+S  AR+II+SAPTAK LV++LEEY P ++ + ++L WE ++R  Y +E
Sbjct: 162 VEEGFISTNARQIIISAPTAKELVKKLEEYSPCHESVATKLCWE-IERIDYSSE 214

[Close]

BLAST of Carg16202 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-71
Identity = 129/165 (78.18%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           VER IDLVYGGGSVGLMGL+S+AVHDGGRHVLGIIP++L P EITG ++GEV  VS MHQ
Sbjct: 37  VERNIDLVYGGGSVGLMGLISQAVHDGGRHVLGIIPKSLAPREITGESIGEVITVSTMHQ 96

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEM RQADAFIALPGGYGT EELLEVITW+QLGIH KPVGLLNVDG+Y+SLL+FIDK 
Sbjct: 97  RKAEMGRQADAFIALPGGYGTFEELLEVITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKA 156

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWED 166
           VDEGFVS TARRIIVSAP A  L+Q LEEY PK+D+ +S++VW++
Sbjct: 157 VDEGFVSSTARRIIVSAPNAPQLLQLLEEYVPKHDDFVSKMVWDN 201

[Close]

BLAST of Carg16202 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 264.6 bits (675), Expect = 5.7e-71
Identity = 126/164 (76.83%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   VERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQ 60
           V R IDLVYGGGS+GLMGL+S+AV +GGRHV+G+IP+TLMP EITG TVGEVK V+DMHQ
Sbjct: 36  VSRNIDLVYGGGSIGLMGLISQAVFNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQ 95

Query: 61  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKT 120
           RKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNV+GYYNSLLSFIDK 
Sbjct: 96  RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKA 155

Query: 121 VDEGFVSPTARRIIVSAPTAKLLVQQLEEYEPKYDEIISQLVWE 165
           V+EGF+SPTAR IIVSAP+AK LV++LE+Y P+++++ S+  WE
Sbjct: 156 VEEGFISPTARHIIVSAPSAKELVKKLEDYVPRHEKVASKKSWE 199

The following BLAST results are available for this feature:

BLAST of Carg16202 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028142.1	2.0e-94	100.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbit...	[more]
XP_022940555.1	2.0e-94	100.00	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita mo...	[more]
XP_023540869.1	1.3e-93	99.44	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita pe...	[more]
XP_023005654.1	5.5e-92	97.21	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like [Cucurbita ma...	[more]
XP_038903675.1	2.0e-89	94.97	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Beninc...	[more]

BLAST of Carg16202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW29	1.3e-83	85.47	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis tha...	[more]
Q8L8B8	1.0e-72	77.01	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha...	[more]
Q9LFH3	1.9e-71	75.29	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis tha...	[more]
B9F166	7.3e-71	73.45	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza...	[more]
Q8H7U8	7.3e-71	79.27	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza...	[more]

BLAST of Carg16202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQZ0	9.8e-95	100.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1KZV7	2.7e-92	97.21	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1CSQ5	9.5e-90	94.97	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia ...	[more]
A0A0A0LEQ3	2.3e-88	93.85	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3...	[more]
A0A6J1J161	1.2e-87	93.30	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]

BLAST of Carg16202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06300.1	9.1e-85	85.47	Putative lysine decarboxylase family protein	[more]
AT2G37210.1	7.2e-74	77.01	lysine decarboxylase family protein	[more]
AT3G53450.1	1.4e-72	75.29	Putative lysine decarboxylase family protein	[more]
AT2G35990.1	3.3e-71	78.18	Putative lysine decarboxylase family protein	[more]
AT2G28305.1	5.7e-71	76.83	Putative lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031100	LOG family	PFAM	PF03641	Lysine_decarbox	coord: 17..146 e-value: 1.9E-44 score: 151.0
None	No IPR available	GENE3D	3.40.50.450		coord: 1..149 e-value: 2.4E-67 score: 228.2
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 1..177
None	No IPR available	PANTHER	PTHR31223:SF72	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7	coord: 1..177
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 2..150
IPR005269	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG	TIGRFAM	TIGR00730	TIGR00730	coord: 3..150 e-value: 4.0E-47 score: 158.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16202-RA	Carg16202-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0102682	N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity