Homology
BLAST of Carg16198 vs. NCBI nr
Match:
KAG7010874.1 (Pentatricopeptide repeat-containing protein MRL1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2128.6 bits (5514), Expect = 0.0e+00
Identity = 1084/1084 (100.00%), Postives = 1084/1084 (100.00%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
Query: 241 KSHSDLPLPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDIYMFYEDT 300
KSHSDLPLPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDIYMFYEDT
Sbjct: 241 KSHSDLPLPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDIYMFYEDT 300
Query: 301 ESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPYKEDSSGN 360
ESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPYKEDSSGN
Sbjct: 301 ESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPYKEDSSGN 360
Query: 361 RKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQCLKGGRLP 420
RKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQCLKGGRLP
Sbjct: 361 RKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQCLKGGRLP 420
Query: 421 ECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTFNMLMSVC 480
ECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTFNMLMSVC
Sbjct: 421 ECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTFNMLMSVC 480
Query: 481 ASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRADCKLFTTL 540
ASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRADCKLFTTL
Sbjct: 481 ASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRADCKLFTTL 540
Query: 541 ISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNV 600
ISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNV
Sbjct: 541 ISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNV 600
Query: 601 KPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQVDRA 660
KPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQVDRA
Sbjct: 601 KPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQVDRA 660
Query: 661 REVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSALIDV 720
REVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSALIDV
Sbjct: 661 REVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSALIDV 720
Query: 721 AGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMKLRPT 780
AGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMKLRPT
Sbjct: 721 AGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMKLRPT 780
Query: 781 VSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAIMLLS 840
VSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAIMLLS
Sbjct: 781 VSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAIMLLS 840
Query: 841 QAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNTQALMVYREIIEAG 900
QAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNTQALMVYREIIEAG
Sbjct: 841 QAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNTQALMVYREIIEAG 900
Query: 901 IVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDGFGEYDPRAFSL 960
IVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDGFGEYDPRAFSL
Sbjct: 901 IVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDGFGEYDPRAFSL 960
Query: 961 LEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILM 1020
LEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILM
Sbjct: 961 LEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILM 1020
Query: 1021 PNETTQVLSSKGERTINLVGRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGN 1080
PNETTQVLSSKGERTINLVGRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGN
Sbjct: 1021 PNETTQVLSSKGERTINLVGRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGN 1080
Query: 1081 LSLD 1085
LSLD
Sbjct: 1081 LSLD 1084
BLAST of Carg16198 vs. NCBI nr
Match:
XP_022944536.1 (pentatricopeptide repeat-containing protein MRL1, chloroplastic-like [Cucurbita moschata] >XP_022944538.1 pentatricopeptide repeat-containing protein MRL1, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1980.7 bits (5130), Expect = 0.0e+00
Identity = 1031/1129 (91.32%), Postives = 1042/1129 (92.29%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERS +GE ETVLQLQKSVLS EASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSSNGEEETVLQLQKSVLSQEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSL SDESEAADLSLLSDIFEP VLQPLMFPNDMTDL LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLLSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLPLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVLVDATELPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYN+NFSSVMINGVSRGAELVP+DSLHIAGYVQRNVPV Y
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNRNFSSVMINGVSRGAELVPDDSLHIAGYVQRNVPVAY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPN KHVHYK LHVDQFKSYNQC
Sbjct: 361 KEGSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNGKHVHYKYLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKAC N
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACTN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNCCSQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCCSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDGKQLQ+AMDILTEMKGLGLYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGKQLQMAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREIIEAGIVPSIE+LSQVLGCLQIPHDPALKSRLI+NIGVCADSSRSSNLCSLIDG
Sbjct: 901 LMVYREIIEAGIVPSIELLSQVLGCLQIPHDPALKSRLIKNIGVCADSSRSSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSSKGERTINLVG
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVGRVGQAVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALKRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1100
BLAST of Carg16198 vs. NCBI nr
Match:
KAG6571044.1 (Pentatricopeptide repeat-containing protein MRL1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1980.7 bits (5130), Expect = 0.0e+00
Identity = 1031/1129 (91.32%), Postives = 1042/1129 (92.29%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERS +GE ETVLQLQKSVLS EASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSSNGEEETVLQLQKSVLSQEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSL SDESEAADLSLLSDIFEP VLQPLMFPNDMTDL LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLLSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLPLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVLVDATELPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYN+NFSSVMINGVSRGAELVP+DSLHIAGYVQRNVPV Y
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNRNFSSVMINGVSRGAELVPDDSLHIAGYVQRNVPVAY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPN KHVHYK LHVDQFKSYNQC
Sbjct: 361 KEGSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNGKHVHYKYLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKAC N
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACTN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNCCSQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCCSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDGKQLQ+AMDILTEMKGLGLYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGKQLQMAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREIIEAGIVPSIE+LSQVLGCLQIPHDPALKSRLI+NIGVCADSSRSSNLCSLIDG
Sbjct: 901 LMVYREIIEAGIVPSIELLSQVLGCLQIPHDPALKSRLIKNIGVCADSSRSSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSSKGERTINLVG
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVGRVGQAVAALLRRLGLPYQGDESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALKRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1100
BLAST of Carg16198 vs. NCBI nr
Match:
XP_022987004.1 (pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 1021/1129 (90.43%), Postives = 1034/1129 (91.59%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSL TRRKCRK
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLCTRRKCRKV 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSY+GE ETVLQLQKSVLSHEASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYNGEEETVLQLQKSVLSHEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEP VLQPLMFPNDMTDL+LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLKLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPL SVYNPVTQHFQADG PVK E FTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVVVDATELPPVAGPLCSVYNPVTQHFQADGGPVKVEIFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLP PN+KHVHYKNLHVDQFKSYNQC
Sbjct: 361 KEGSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPCPNQKHVHYKNLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICK+KKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKTKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNC SQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCFSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDG+QLQ+AMDILTEMKGL LYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGEQLQMAMDILTEMKGLKLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYK IIGMCLRRTAEP ALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKRIIGMCLRRTAEPFALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREI+EAGIVPSIEVLSQVLGCLQIPHDP LK RLI+NIGVCADSSR SNLCSLIDG
Sbjct: 901 LMVYREILEAGIVPSIEVLSQVLGCLQIPHDPDLKRRLIKNIGVCADSSRYSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSS GERTINL G
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSNGERTINLAGRVGQVVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALRRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1100
BLAST of Carg16198 vs. NCBI nr
Match:
XP_023512947.1 (pentatricopeptide repeat-containing protein MRL1, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1947.2 bits (5043), Expect = 0.0e+00
Identity = 1016/1129 (89.99%), Postives = 1031/1129 (91.32%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCL VNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRR+CRK
Sbjct: 1 MEVTFSSKPQSLMFNPCLLVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRRCRKV 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQL+RRKKNAVERSQ TKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLSRRKKNAVERSQSTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNI+IKDRTEERSYSGE ETVLQLQKSVLS EASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNISIKDRTEERSYSGEEETVLQLQKSVLSREASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSD+FEP VLQPLMFPNDMTDLQLNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDMFEPRVLQPLMFPNDMTDLQLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVLVDATELPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNR GKEPSLH+GKVVNGLPYPN KHVHYKNLHVDQFKSYNQC
Sbjct: 361 KEGSSGNR-------------GKEPSLHRGKVVNGLPYPNGKHVHYKNLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSG+VDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGEVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHP+EPDHITIGALIKACAN
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPVEPDHITIGALIKACAN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNCCSQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCCSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDV+GHAG+LDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVSGHAGELDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDGKQLQ+AMDILTEMKGLGLYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGKQLQMAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG
Sbjct: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSSKGERTINL G
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLAGRVGQAVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALRRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1087
BLAST of Carg16198 vs. ExPASy Swiss-Prot
Match:
Q0WLC6 (Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL1 PE=1 SV=2)
HSP 1 Score: 843.2 bits (2177), Expect = 3.3e-243
Identity = 515/1111 (46.35%), Postives = 675/1111 (60.76%), Query Frame = 0
Query: 34 VRRQFLGGGHNLRPPDSLRTR---RKCRKAGLFVQSPRYIFRATLSSNPALIVVAVITFS 93
+RR FLG H+LRP LRTR R R++ ++SPR + RA++ S LIVVAV FS
Sbjct: 33 LRRDFLGCCHSLRPSPHLRTRAGKRNSRRSS--IRSPRLVVRASIDSGLILIVVAVTAFS 92
Query: 94 AVSFIYMQLNRRKKNAVERSQPTKLALSQLGRDINWSADG--EIMGFREHHGVFLEQNIA 153
A++F Y Q RK R ++A G++ SA+ EI G H G +E N+
Sbjct: 93 AIAFAYCQSTFRK-----RKSSDEVATVHGGKN---SAENRREIHG-DIHEGNPVEINVG 152
Query: 154 IKDRTEERSYSGEGETVLQLQK-SVLSHEASVTESLQPSVSEVTTSKDSDSLFSDESEAA 213
+ EE E E Q+ + +V+ +++ E Q +V+ VTT + +L
Sbjct: 153 FRKVEEESVNLLEEEKAHQIHEVAVMDYDSVSAEDSQFAVASVTTVATAHTLI------- 212
Query: 214 DLSLLSDIFEPSV-LQPLMFPNDMTDLQLNGSHVKSHSDLPLPPVAGPLYSVYNPV---- 273
D S S I SV L+ F + Q+ S + + ++S+ +P
Sbjct: 213 DESFSSSIVNGSVALESATFGVKTPEKQVGNSEDQKGLEHDFSQAVVGIHSIASPQVVDD 272
Query: 274 TQHFQADGEPVKEEKFTSSNFLIEEPAREDIYMFYEDTESSSQTE------------TSR 333
T+ + + + ++ S F E RE+I+ FY SS+++ TS
Sbjct: 273 TRALEYEYNGLLQKPLEYSIF--AESKREEIHTFYGSNHSSAKSSRLPSLKAVSPAVTSA 332
Query: 334 TSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPYKEDSSGNRKISGGNDIS 393
T+ L+ + ++ +I+ + + S G VQ V + + + D
Sbjct: 333 TNSLFLDHKNNGVID-----TQFPGQSSGQATGDVQEENLVAHSNGGVSHIRKDVKGDWK 392
Query: 394 RYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQCLKGGRLPECIKILQDME 453
GK + + P N + + + +YN+ L+ GR+ +CI +L+D++
Sbjct: 393 FPSDGKHVGHQIDESMPQFPARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLD 452
Query: 454 KEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTFNMLMSVCASSQDSDSKL 513
+ LLDM+KIYH FF CK ++AV+EAF+FT LI NPT+STFNMLMSVCASSQD +
Sbjct: 453 QRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIE--- 512
Query: 514 MYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRADCKLFTTLISTCGKSGKV 573
GA V+RLVQE+GM ADCKL+TTLIS+C KSGKV
Sbjct: 513 --------------------------GARGVLRLVQESGMTADCKLYTTLISSCAKSGKV 572
Query: 574 DAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNVKPDRVVFNAL 633
DAMFEVFH+M N+GVE N+HT+GALIDGCARAGQVAKAFG YGI+RSKNVKPDRVVFNAL
Sbjct: 573 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 632
Query: 634 ITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQVDRAREVYKMIHDC 693
I+ACGQSGAVDRAFDVLAEM AE HPI+PDHI+IGAL+KAC NAGQV+RA+EVY+MIH
Sbjct: 633 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 692
Query: 694 KINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSALIDVAGHAGKLDAA 753
I GTPEVYTIAVN CS+S DWDFA S+Y+DM E V PDE+F SALIDVAGHA LD A
Sbjct: 693 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 752
Query: 754 FEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMKLRPTVSTVNALITA 813
F IL +AK+ + +G +SYSSLMGAC NAK+W+KALELYE +KS+KLRPT+ST+NALITA
Sbjct: 753 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 812
Query: 814 LCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAIMLLSQAKEDGIVPT 873
LC+G QL AM+ L E+K LGL PN ITYS+L ASER DD E++ LLSQAK DG+ P
Sbjct: 813 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 872
Query: 874 LTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQV----NTQALMVYREIIEAGIVPSIE 933
L M +CI +C RR + A ++S S PQ+ + ALMVYRE I G VP+ E
Sbjct: 873 LIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTE 932
Query: 934 VLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDGFGEYDPRAFSLLEEAAS 993
V+SQVLGCLQ+PHD AL+ RLI +G+ S + N+ L+DGFGEYDPRAFSLLEEA S
Sbjct: 933 VVSQVLGCLQLPHDAALRDRLISTLGINISSQKQHNIFPLVDGFGEYDPRAFSLLEEATS 992
Query: 994 LGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILMPNETTQ 1053
LGV P VS P+ D EL + AEVYLLT+ KGLKHRLAAG+++P+I +++ + +
Sbjct: 993 LGVLPSVSFNKIPLFFDTTELPKNVAEVYLLTIFKGLKHRLAAGAKIPHINLIISIQEKE 1052
Query: 1054 VLSSKGERTINLVGR--------------------------------WLQPKLSNSLS-G 1085
+ + +GE+TI+L GR W QPKL + S G
Sbjct: 1053 IRTPEGEKTIDLTGRVGQEIGALLRRLDIPYHRKDSRLRINGVSLKNWFQPKLDSPFSGG 1089
BLAST of Carg16198 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 7.3e-33
Identity = 91/326 (27.91%), Postives = 163/326 (50.00%), Query Frame = 0
Query: 537 FTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAG----QVAKAFGVY 596
F+ LIS G+SG + VF+ M G+ PN+ TY A+ID C + G QVAK F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE- 330
Query: 597 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACA 656
M+ V+PDR+ FN+L+ C + G + A ++ EM IE D + L+ A
Sbjct: 331 --MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM--TNRRIEQDVFSYNTLLDAIC 390
Query: 657 NAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEI 716
GQ+D A E+ + +I Y+ ++ +++ +D A +++ +M G+ D +
Sbjct: 391 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 450
Query: 717 FLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDL 776
+ L+ + G+ + A +IL E ++ + +V+Y++L+G + + +++ ++
Sbjct: 451 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 510
Query: 777 KSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDL 836
K + P + T + LI G + AM+I E K GL + + YS L A +N +
Sbjct: 511 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 570
Query: 837 EIAIMLLSQAKEDGIVPTLTMYKCII 859
A+ L+ + ++GI P + Y II
Sbjct: 571 GSAVSLIDEMTKEGISPNVVTYNSII 591
BLAST of Carg16198 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 8.1e-32
Identity = 105/371 (28.30%), Postives = 174/371 (46.90%), Query Frame = 0
Query: 537 FTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMR 596
+ TLI K K+D F++ M G+EPN+ +Y +I+G R G++ + V M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 597 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQ 656
+ D V +N LI + G +A + AEM H + P IT +LI + AG
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM--LRHGLTPSVITYTSLIHSMCKAGN 362
Query: 657 VDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSA 716
++RA E + + YT V+ SQ + A V ++M +NG P + +A
Sbjct: 363 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 422
Query: 717 LIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMK 776
LI+ GK++ A +L + K LS +VSYS+++ + + +AL + ++
Sbjct: 423 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 482
Query: 777 LRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAI 836
++P T ++LI C+ ++ + A D+ EM +GL P+ TY+ L A DLE A+
Sbjct: 483 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 542
Query: 837 MLLSQAKEDGIVPTLTMYKCIIGMCLR--RTAEPSALDRSLLSHDSKLPQVNTQALMVYR 896
L ++ E G++P + Y +I + RT E L L +S V L+
Sbjct: 543 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 602
Query: 897 EIIEAGIVPSI 906
IE V S+
Sbjct: 603 SNIEFKSVVSL 611
BLAST of Carg16198 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 4.0e-31
Identity = 100/412 (24.27%), Postives = 187/412 (45.39%), Query Frame = 0
Query: 525 VQEAGMRADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQ 584
+++ G D FT L+ K+G F+ M + G+ PN+HTY LI G R +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 585 VAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITI 644
+ A ++G M S VKP + I G+SG A + +M + I P+ +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM--KTKGIAPNIVAC 473
Query: 645 GALIKACANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTE 704
A + + A AG+ A++++ + D + Y + + C S+ + D A + +M E
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 533
Query: 705 NGVQPDEIFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQK 764
NG +PD I +++LI+ A ++D A+++ K + L +V+Y++L+ Q+
Sbjct: 534 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593
Query: 765 ALELYEDLKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTA 824
A+EL+E + P T N L LC ++ +A+ +L +M +G P+ TY+ +
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653
Query: 825 ASERNDDLEIAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQ 884
+N ++ A+ Q K+ +Y + +C T P + SL+ K+
Sbjct: 654 GLVKNGQVKEAMCFFHQMKK-------LVYPDFVTLC---TLLPGVVKASLIEDAYKI-- 713
Query: 885 VNTQALMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCAD 937
+Y + + +++ +L I + + RL+ N G+C D
Sbjct: 714 ---ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN-GICRD 747
BLAST of Carg16198 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 138.3 bits (347), Expect = 5.3e-31
Identity = 109/438 (24.89%), Postives = 191/438 (43.61%), Query Frame = 0
Query: 466 PNPTLSTFNMLMSVCASSQDSD-----SKLMYSL-ISFNYFCLETISVVHNLCIVNLG-- 525
P P++ F+ L+S A D + M +L I N++ T S++ N C
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY---TYSILIN-CFCRRSQL 136
Query: 526 --AFQVMRLVQEAGMRADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGAL 585
A V+ + + G + ++L++ S ++ + +M TG +PN T+ L
Sbjct: 137 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 196
Query: 586 IDGCARAGQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELH 645
I G + ++A + M +K +PD V + ++ + G D AF++L +M E
Sbjct: 197 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--EQG 256
Query: 646 PIEPDHITIGALIKACANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFA 705
+EP + +I +D A ++K + I Y+ ++C W A
Sbjct: 257 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 316
Query: 706 SSVYQDMTENGVQPDEIFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGA 765
S + DM E + PD SALID GKL A ++ E ++ IV+YSSL+
Sbjct: 317 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 376
Query: 766 CSNAKNWQKALELYEDLKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPN 825
+A +++E + S P V T N LI C K+++ M++ EM GL N
Sbjct: 377 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 436
Query: 826 NITYSILTAASERNDDLEIAIMLLSQAKEDGIVPTLTMYKCII-GMCLRRTAEPSALDRS 885
+TY+IL + D ++A + + DG+ P + Y ++ G+C E + +
Sbjct: 437 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 496
Query: 886 LLSHDSKLPQVNTQALMV 893
L P + T +M+
Sbjct: 497 YLQRSKMEPTIYTYNIMI 508
BLAST of Carg16198 vs. ExPASy TrEMBL
Match:
A0A6J1FY51 (pentatricopeptide repeat-containing protein MRL1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448964 PE=3 SV=1)
HSP 1 Score: 1980.7 bits (5130), Expect = 0.0e+00
Identity = 1031/1129 (91.32%), Postives = 1042/1129 (92.29%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERS +GE ETVLQLQKSVLS EASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSSNGEEETVLQLQKSVLSQEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSL SDESEAADLSLLSDIFEP VLQPLMFPNDMTDL LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLLSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLPLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVLVDATELPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYN+NFSSVMINGVSRGAELVP+DSLHIAGYVQRNVPV Y
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNRNFSSVMINGVSRGAELVPDDSLHIAGYVQRNVPVAY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPN KHVHYK LHVDQFKSYNQC
Sbjct: 361 KEGSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNGKHVHYKYLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKAC N
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACTN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNCCSQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCCSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDGKQLQ+AMDILTEMKGLGLYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGKQLQMAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREIIEAGIVPSIE+LSQVLGCLQIPHDPALKSRLI+NIGVCADSSRSSNLCSLIDG
Sbjct: 901 LMVYREIIEAGIVPSIELLSQVLGCLQIPHDPALKSRLIKNIGVCADSSRSSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSSKGERTINLVG
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVGRVGQAVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALKRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1100
BLAST of Carg16198 vs. ExPASy TrEMBL
Match:
A0A6J1JHM6 (pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484582 PE=3 SV=1)
HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 1021/1129 (90.43%), Postives = 1034/1129 (91.59%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSL TRRKCRK
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLCTRRKCRKV 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSY+GE ETVLQLQKSVLSHEASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYNGEEETVLQLQKSVLSHEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEP VLQPLMFPNDMTDL+LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLKLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPL SVYNPVTQHFQADG PVK E FTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVVVDATELPPVAGPLCSVYNPVTQHFQADGGPVKVEIFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLP PN+KHVHYKNLHVDQFKSYNQC
Sbjct: 361 KEGSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPCPNQKHVHYKNLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICK+KKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKTKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNC SQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCFSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDG+QLQ+AMDILTEMKGL LYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGEQLQMAMDILTEMKGLKLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYK IIGMCLRRTAEP ALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKRIIGMCLRRTAEPFALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREI+EAGIVPSIEVLSQVLGCLQIPHDP LK RLI+NIGVCADSSR SNLCSLIDG
Sbjct: 901 LMVYREILEAGIVPSIEVLSQVLGCLQIPHDPDLKRRLIKNIGVCADSSRYSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSS GERTINL G
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSNGERTINLAGRVGQVVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALRRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1100
BLAST of Carg16198 vs. ExPASy TrEMBL
Match:
A0A6J1JFL7 (pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484582 PE=3 SV=1)
HSP 1 Score: 1920.6 bits (4974), Expect = 0.0e+00
Identity = 1008/1129 (89.28%), Postives = 1021/1129 (90.43%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSL TRRKCRK
Sbjct: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLCTRRKCRKV 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPRYIFRATLSSNPALIVVAV+TFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL
Sbjct: 61 GLFVQSPRYIFRATLSSNPALIVVAVVTFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSY+GE ETVLQLQKSVLSHEASVT
Sbjct: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYNGEEETVLQLQKSVLSHEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEP VLQPLMFPNDMTDL+LNGSHV
Sbjct: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPRVLQPLMFPNDMTDLKLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHSDLP LPPVAGPL SVYNPVTQHFQADG PVK E FTSSNFLIEEPAREDI
Sbjct: 241 KSHSDLPVVVDATELPPVAGPLCSVYNPVTQHFQADGGPVKVEIFTSSNFLIEEPAREDI 300
Query: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY
Sbjct: 301 YMFYEDTESSSQTETSRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPY 360
Query: 361 KEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQC 420
KE SSGNR GKEPSLHKGKVVNGLP PN+KHVHYKNLHVDQFKSYNQC
Sbjct: 361 KEGSSGNR-------------GKEPSLHKGKVVNGLPCPNQKHVHYKNLHVDQFKSYNQC 420
Query: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTF 480
LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICK+KKAVQEAFQFTILIPNPTLSTF
Sbjct: 421 LKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKTKKAVQEAFQFTILIPNPTLSTF 480
Query: 481 NMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRAD 540
NMLMSVCASSQDSDS AFQVMRLVQEAGMRAD
Sbjct: 481 NMLMSVCASSQDSDS-----------------------------AFQVMRLVQEAGMRAD 540
Query: 541 CKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
CKL+TTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG
Sbjct: 541 CKLYTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYG 600
Query: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN
Sbjct: 601 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACAN 660
Query: 661 AGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIF 720
AGQVDRAREVYKMIHDCKI GTPEVYTIAVNC SQSCDWDFASSVYQDMT+NGVQPDEIF
Sbjct: 661 AGQVDRAREVYKMIHDCKIKGTPEVYTIAVNCFSQSCDWDFASSVYQDMTKNGVQPDEIF 720
Query: 721 LSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
LSALIDVAGHAGKLDAAFEILGEAKTL LSVGIVSYSSLMGACSNAKNWQKALELYEDLK
Sbjct: 721 LSALIDVAGHAGKLDAAFEILGEAKTLGLSVGIVSYSSLMGACSNAKNWQKALELYEDLK 780
Query: 781 SMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLE 840
SMKLRPTVSTVNALITALCDG+QLQ+AMDILTEMKGL LYPNNITYSILTAASERNDDLE
Sbjct: 781 SMKLRPTVSTVNALITALCDGEQLQMAMDILTEMKGLKLYPNNITYSILTAASERNDDLE 840
Query: 841 IAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT----QA 900
IAIMLLSQAKEDGIVPTLTMYK IIGMCLRRTAEP ALDRSLLSHDSKLPQVN+ QA
Sbjct: 841 IAIMLLSQAKEDGIVPTLTMYKRIIGMCLRRTAEPFALDRSLLSHDSKLPQVNSKWTAQA 900
Query: 901 LMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDG 960
LMVYREI+EAGIVPSIEVLSQVLGCLQIPHDP LK RLI+NIGVCADSSR SNLCSLIDG
Sbjct: 901 LMVYREILEAGIVPSIEVLSQVLGCLQIPHDPDLKRRLIKNIGVCADSSRYSNLCSLIDG 960
Query: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA
Sbjct: 961 FGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAA 1020
Query: 1021 GSRLPNIMILMPNETTQVLSSKGERTINLVG----------------------------- 1080
GSRLPNIMILMPNETTQVLSS GERTINL G
Sbjct: 1021 GSRLPNIMILMPNETTQVLSSNGERTINLAGRVGQVVAALLRRLGLPYQGNESSGKIRIN 1080
Query: 1081 -----RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRN+RTGNLSLD
Sbjct: 1081 GLALRRWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNIRTGNLSLD 1087
BLAST of Carg16198 vs. ExPASy TrEMBL
Match:
A0A0A0LLH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258850 PE=3 SV=1)
HSP 1 Score: 1742.6 bits (4512), Expect = 0.0e+00
Identity = 914/1131 (80.81%), Postives = 977/1131 (86.38%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEV F S PQSL FNPCLP+NS SSFSYSRLRFVRRQFLG HNLRPPD+LR+RR+CR
Sbjct: 1 MEVFFPSNPQSLTFNPCLPLNSPSSFSYSRLRFVRRQFLGSSHNLRPPDALRSRRRCRNL 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPR I RAT SSNP LIVVAV+TFSAVSFIYM LNRRKKNAVERS+ KLALSQL
Sbjct: 61 GLFVQSPRCILRATFSSNPVLIVVAVVTFSAVSFIYMNLNRRKKNAVERSRSPKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GR INWS DG +MGFR+HHG FLEQNIA+KDRTEE+SYSGE ETVLQLQKS LSHEASVT
Sbjct: 121 GRGINWSVDGHMMGFRDHHGDFLEQNIAVKDRTEEKSYSGEEETVLQLQKSGLSHEASVT 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
E+L PSVSEVTTSKDSDSLFSDESEA D SLLS IFE VLQPL+F NDMTDL+LNGSHV
Sbjct: 181 ETLPPSVSEVTTSKDSDSLFSDESEATDPSLLSAIFESGVLQPLIFANDMTDLRLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHS+LP LPPV GPLYSVY+ VTQH + DGE +KEEKF SSNF IEEPAREDI
Sbjct: 241 KSHSELPVVVDTTELPPVTGPLYSVYDQVTQHLKEDGELLKEEKFNSSNFQIEEPAREDI 300
Query: 301 YMFYEDTESSSQTET-SRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVP-V 360
YMFYEDT+SS+QTET SRTSHLYNQ FSS+M+NGVSR AELV EDSL +AGYVQR VP V
Sbjct: 301 YMFYEDTKSSNQTETSSRTSHLYNQKFSSLMVNGVSRVAELVLEDSLPVAGYVQREVPDV 360
Query: 361 PYKEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYN 420
YKE SSGNRK SGGN+ISR+G+ KEPSLHKGKVVNGLP+PN KHVHYKNL VDQ+KSYN
Sbjct: 361 RYKEGSSGNRKKSGGNNISRHGERKEPSLHKGKVVNGLPHPNGKHVHYKNLDVDQYKSYN 420
Query: 421 QCLKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLS 480
QCLKGGRL +CI+ILQDMEKEG+LDMNKIYHGKFFNICKSKKAVQEAFQ+T LI NPTLS
Sbjct: 421 QCLKGGRLHDCIRILQDMEKEGILDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLS 480
Query: 481 TFNMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMR 540
TFNMLMSVCASSQDS+ AFQV+RLVQEAGM+
Sbjct: 481 TFNMLMSVCASSQDSER-----------------------------AFQVVRLVQEAGMK 540
Query: 541 ADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGV 600
ADCKL+TTLISTCGKSGKVDAMFEVFHRMVN GVEPNVHTYGALIDGCARA QVAKAFGV
Sbjct: 541 ADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGV 600
Query: 601 YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKAC 660
YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGAL+KAC
Sbjct: 601 YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKAC 660
Query: 661 ANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDE 720
ANAGQVDRAREVYKMIHD KI GTPEVYTIAVNCCSQSCDWDFAS++YQDMT GVQPDE
Sbjct: 661 ANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDE 720
Query: 721 IFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYED 780
IFLSALIDVAGHAGKLDAAFE+LGEAKTL + VGIVSYSSLMGACSNAKNWQKAL LYED
Sbjct: 721 IFLSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYED 780
Query: 781 LKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDD 840
LKSMKLR TVSTVNALITAL DG+QLQ+AMDILTEMK LGL PNNITYSILTAAS+RN+D
Sbjct: 781 LKSMKLRLTVSTVNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNND 840
Query: 841 LEIAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVNT---- 900
LEIA+MLLSQAKEDGIVPTLTMY+CIIGMCLRR A+PS+LDR L+S DS LPQV++
Sbjct: 841 LEIALMLLSQAKEDGIVPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWTA 900
Query: 901 QALMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLI 960
QAL VYREIIEAGIVPSI+VLSQVLGCLQIPHDPALKSRLIENIGV ADSSRSS+LCSLI
Sbjct: 901 QALKVYREIIEAGIVPSIDVLSQVLGCLQIPHDPALKSRLIENIGVSADSSRSSSLCSLI 960
Query: 961 DGFGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRL 1020
DGFGEYDPRAFSL EEAASLGVAPFVSLKG+PI+VD KEL IHTAEVYLLTVLKGLKHRL
Sbjct: 961 DGFGEYDPRAFSLFEEAASLGVAPFVSLKGNPIVVDAKELQIHTAEVYLLTVLKGLKHRL 1020
Query: 1021 AAGSRLPNIMILMPNETTQVLSSKGERTINLVG--------------------------- 1080
AAGSRLPNIMIL+ NETT++L SKGERTINL G
Sbjct: 1021 AAGSRLPNIMILLSNETTEILFSKGERTINLSGRVGQAVAALLRRLGLPYQGNESSGKIR 1080
Query: 1081 -------RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLS+SLSGKPGEF +FQSRLR+GISHQQR++R GNLSLD
Sbjct: 1081 INGLALRRWLQPKLSDSLSGKPGEFGTFQSRLRKGISHQQRDIRIGNLSLD 1102
BLAST of Carg16198 vs. ExPASy TrEMBL
Match:
A0A5D3BKV6 (Pentatricopeptide repeat-containing protein MRL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001730 PE=3 SV=1)
HSP 1 Score: 1734.2 bits (4490), Expect = 0.0e+00
Identity = 911/1131 (80.55%), Postives = 972/1131 (85.94%), Query Frame = 0
Query: 1 MEVTFSSKPQSLMFNPCLPVNSSSSFSYSRLRFVRRQFLGGGHNLRPPDSLRTRRKCRKA 60
MEV FSS PQSL FNPCLP+NS SSFSYSRLRFVRRQFLG HNLRPPD+LR+RR+CR
Sbjct: 1 MEVFFSSNPQSLTFNPCLPLNSPSSFSYSRLRFVRRQFLGSSHNLRPPDALRSRRRCRNL 60
Query: 61 GLFVQSPRYIFRATLSSNPALIVVAVITFSAVSFIYMQLNRRKKNAVERSQPTKLALSQL 120
GLFVQSPR I RA+LSSNP LIVVAV+TFSAVSFIYM LNRRKKNAVERS+ KLALSQL
Sbjct: 61 GLFVQSPRCILRASLSSNPVLIVVAVVTFSAVSFIYMNLNRRKKNAVERSRSPKLALSQL 120
Query: 121 GRDINWSADGEIMGFREHHGVFLEQNIAIKDRTEERSYSGEGETVLQLQKSVLSHEASVT 180
GR INWS DG +MGFR+HHG FLEQNIA+KDR EE+SYSGE ETVLQLQKS LSHEASV
Sbjct: 121 GRGINWSVDGHVMGFRDHHGEFLEQNIAVKDRAEEKSYSGEEETVLQLQKSGLSHEASVN 180
Query: 181 ESLQPSVSEVTTSKDSDSLFSDESEAADLSLLSDIFEPSVLQPLMFPNDMTDLQLNGSHV 240
E+L PSVSEVTTSKDSDSLFSDESEA D SLLS IFE VLQPL+F N+MTDL+LNGSHV
Sbjct: 181 ETLPPSVSEVTTSKDSDSLFSDESEATDPSLLSAIFESGVLQPLIFANEMTDLRLNGSHV 240
Query: 241 KSHSDLP-------LPPVAGPLYSVYNPVTQHFQADGEPVKEEKFTSSNFLIEEPAREDI 300
KSHS+LP LPPV GPLYSVY+ VTQH + DGE + EEK +SSNF IEEPAREDI
Sbjct: 241 KSHSELPVVVDTTELPPVTGPLYSVYDQVTQHLKEDGELLNEEKLSSSNFQIEEPAREDI 300
Query: 301 YMFYEDTESSSQTET-SRTSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVP-V 360
YMFY+DTESS+QTET SRTSHLYN+ FSS+M+NGVSR AELV EDSL +AGYVQR VP V
Sbjct: 301 YMFYQDTESSNQTETSSRTSHLYNKKFSSLMVNGVSRVAELVLEDSLPVAGYVQRKVPDV 360
Query: 361 PYKEDSSGNRKISGGNDISRYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYN 420
YKE SSGNRK SGGN+IS +G+ KEPSLHKGK VNG+ +PN KHVHYKNLHVDQ+KSYN
Sbjct: 361 RYKEGSSGNRKKSGGNNISGHGERKEPSLHKGKAVNGVTHPNGKHVHYKNLHVDQYKSYN 420
Query: 421 QCLKGGRLPECIKILQDMEKEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLS 480
QCLKGGRL +CI+ILQDME EG+LDMNKIYHGKFFNICKSKKAVQEAFQ+T LI NPTLS
Sbjct: 421 QCLKGGRLHDCIRILQDMETEGILDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLS 480
Query: 481 TFNMLMSVCASSQDSDSKLMYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMR 540
TFNMLMSVCAS QDS+ AFQV+RLVQEAGM+
Sbjct: 481 TFNMLMSVCASRQDSER-----------------------------AFQVVRLVQEAGMK 540
Query: 541 ADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGV 600
ADCKL+TTLISTCGKSGKVDAMFEVFHRMVN GVEPNVHTYGALIDGCARAGQVAKAFGV
Sbjct: 541 ADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAGQVAKAFGV 600
Query: 601 YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKAC 660
YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGAL+KAC
Sbjct: 601 YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKAC 660
Query: 661 ANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDE 720
ANAGQVDRA EVYKMIHD KI GTPEVYTIAVNCCSQSCDWDFAS+VYQDMT GVQPDE
Sbjct: 661 ANAGQVDRAIEVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNVYQDMTRKGVQPDE 720
Query: 721 IFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYED 780
IFLSALIDVAGHAGKLDAAFEILGEAKTL + VGIVSYSSLMGACSNAKNWQKAL LYED
Sbjct: 721 IFLSALIDVAGHAGKLDAAFEILGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYED 780
Query: 781 LKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDD 840
LKSMKLR TVSTVNALITALCDG+QLQ+AMDILTEMK LGL PNNITYSILTAASERN+D
Sbjct: 781 LKSMKLRLTVSTVNALITALCDGEQLQMAMDILTEMKELGLSPNNITYSILTAASERNND 840
Query: 841 LEIAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQVN----T 900
LEIA+MLLSQAKEDGIVPTLTMY+CIIGMCLRR AEP++LDR L+S DSKLPQV+
Sbjct: 841 LEIALMLLSQAKEDGIVPTLTMYRCIIGMCLRRIAEPTSLDRPLMSLDSKLPQVDNKWTA 900
Query: 901 QALMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLI 960
QALMVYREIIEAGIVPSI+VLSQVLGCLQIPHD ALKSRLIENIGV ADSSRSSNLCSLI
Sbjct: 901 QALMVYREIIEAGIVPSIDVLSQVLGCLQIPHDSALKSRLIENIGVSADSSRSSNLCSLI 960
Query: 961 DGFGEYDPRAFSLLEEAASLGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRL 1020
DGFGEYDPRAFSLLEEAASLGVA FV KG+PI+VD KEL IHTAEVYLLTVLKGLKHRL
Sbjct: 961 DGFGEYDPRAFSLLEEAASLGVATFVFPKGNPIVVDAKELQIHTAEVYLLTVLKGLKHRL 1020
Query: 1021 AAGSRLPNIMILMPNETTQVLSSKGERTINLVG--------------------------- 1080
AAGSRLPNIMIL+PNETTQ+LS KGERTINL G
Sbjct: 1021 AAGSRLPNIMILLPNETTQILSPKGERTINLSGRVGQAVAALLRRLGLPYLGNESSGKIR 1080
Query: 1081 -------RWLQPKLSNSLSGKPGEFSSFQSRLREGISHQQRNLRTGNLSLD 1085
RWLQPKLS+SLSGKPGEF +FQSRLR+GISHQQRN+R GNLSLD
Sbjct: 1081 INGLALRRWLQPKLSDSLSGKPGEFGTFQSRLRKGISHQQRNIRIGNLSLD 1102
BLAST of Carg16198 vs. TAIR 10
Match:
AT4G34830.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 843.2 bits (2177), Expect = 2.4e-244
Identity = 515/1111 (46.35%), Postives = 675/1111 (60.76%), Query Frame = 0
Query: 34 VRRQFLGGGHNLRPPDSLRTR---RKCRKAGLFVQSPRYIFRATLSSNPALIVVAVITFS 93
+RR FLG H+LRP LRTR R R++ ++SPR + RA++ S LIVVAV FS
Sbjct: 33 LRRDFLGCCHSLRPSPHLRTRAGKRNSRRSS--IRSPRLVVRASIDSGLILIVVAVTAFS 92
Query: 94 AVSFIYMQLNRRKKNAVERSQPTKLALSQLGRDINWSADG--EIMGFREHHGVFLEQNIA 153
A++F Y Q RK R ++A G++ SA+ EI G H G +E N+
Sbjct: 93 AIAFAYCQSTFRK-----RKSSDEVATVHGGKN---SAENRREIHG-DIHEGNPVEINVG 152
Query: 154 IKDRTEERSYSGEGETVLQLQK-SVLSHEASVTESLQPSVSEVTTSKDSDSLFSDESEAA 213
+ EE E E Q+ + +V+ +++ E Q +V+ VTT + +L
Sbjct: 153 FRKVEEESVNLLEEEKAHQIHEVAVMDYDSVSAEDSQFAVASVTTVATAHTLI------- 212
Query: 214 DLSLLSDIFEPSV-LQPLMFPNDMTDLQLNGSHVKSHSDLPLPPVAGPLYSVYNPV---- 273
D S S I SV L+ F + Q+ S + + ++S+ +P
Sbjct: 213 DESFSSSIVNGSVALESATFGVKTPEKQVGNSEDQKGLEHDFSQAVVGIHSIASPQVVDD 272
Query: 274 TQHFQADGEPVKEEKFTSSNFLIEEPAREDIYMFYEDTESSSQTE------------TSR 333
T+ + + + ++ S F E RE+I+ FY SS+++ TS
Sbjct: 273 TRALEYEYNGLLQKPLEYSIF--AESKREEIHTFYGSNHSSAKSSRLPSLKAVSPAVTSA 332
Query: 334 TSHLYNQNFSSVMINGVSRGAELVPEDSLHIAGYVQRNVPVPYKEDSSGNRKISGGNDIS 393
T+ L+ + ++ +I+ + + S G VQ V + + + D
Sbjct: 333 TNSLFLDHKNNGVID-----TQFPGQSSGQATGDVQEENLVAHSNGGVSHIRKDVKGDWK 392
Query: 394 RYGKGKEPSLHKGKVVNGLPYPNRKHVHYKNLHVDQFKSYNQCLKGGRLPECIKILQDME 453
GK + + P N + + + +YN+ L+ GR+ +CI +L+D++
Sbjct: 393 FPSDGKHVGHQIDESMPQFPARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLD 452
Query: 454 KEGLLDMNKIYHGKFFNICKSKKAVQEAFQFTILIPNPTLSTFNMLMSVCASSQDSDSKL 513
+ LLDM+KIYH FF CK ++AV+EAF+FT LI NPT+STFNMLMSVCASSQD +
Sbjct: 453 QRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIE--- 512
Query: 514 MYSLISFNYFCLETISVVHNLCIVNLGAFQVMRLVQEAGMRADCKLFTTLISTCGKSGKV 573
GA V+RLVQE+GM ADCKL+TTLIS+C KSGKV
Sbjct: 513 --------------------------GARGVLRLVQESGMTADCKLYTTLISSCAKSGKV 572
Query: 574 DAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMRSKNVKPDRVVFNAL 633
DAMFEVFH+M N+GVE N+HT+GALIDGCARAGQVAKAFG YGI+RSKNVKPDRVVFNAL
Sbjct: 573 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 632
Query: 634 ITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQVDRAREVYKMIHDC 693
I+ACGQSGAVDRAFDVLAEM AE HPI+PDHI+IGAL+KAC NAGQV+RA+EVY+MIH
Sbjct: 633 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 692
Query: 694 KINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSALIDVAGHAGKLDAA 753
I GTPEVYTIAVN CS+S DWDFA S+Y+DM E V PDE+F SALIDVAGHA LD A
Sbjct: 693 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 752
Query: 754 FEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMKLRPTVSTVNALITA 813
F IL +AK+ + +G +SYSSLMGAC NAK+W+KALELYE +KS+KLRPT+ST+NALITA
Sbjct: 753 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 812
Query: 814 LCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAIMLLSQAKEDGIVPT 873
LC+G QL AM+ L E+K LGL PN ITYS+L ASER DD E++ LLSQAK DG+ P
Sbjct: 813 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 872
Query: 874 LTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQV----NTQALMVYREIIEAGIVPSIE 933
L M +CI +C RR + A ++S S PQ+ + ALMVYRE I G VP+ E
Sbjct: 873 LIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTE 932
Query: 934 VLSQVLGCLQIPHDPALKSRLIENIGVCADSSRSSNLCSLIDGFGEYDPRAFSLLEEAAS 993
V+SQVLGCLQ+PHD AL+ RLI +G+ S + N+ L+DGFGEYDPRAFSLLEEA S
Sbjct: 933 VVSQVLGCLQLPHDAALRDRLISTLGINISSQKQHNIFPLVDGFGEYDPRAFSLLEEATS 992
Query: 994 LGVAPFVSLKGSPIIVDVKELHIHTAEVYLLTVLKGLKHRLAAGSRLPNIMILMPNETTQ 1053
LGV P VS P+ D EL + AEVYLLT+ KGLKHRLAAG+++P+I +++ + +
Sbjct: 993 LGVLPSVSFNKIPLFFDTTELPKNVAEVYLLTIFKGLKHRLAAGAKIPHINLIISIQEKE 1052
Query: 1054 VLSSKGERTINLVGR--------------------------------WLQPKLSNSLS-G 1085
+ + +GE+TI+L GR W QPKL + S G
Sbjct: 1053 IRTPEGEKTIDLTGRVGQEIGALLRRLDIPYHRKDSRLRINGVSLKNWFQPKLDSPFSGG 1089
BLAST of Carg16198 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 144.4 bits (363), Expect = 5.2e-34
Identity = 91/326 (27.91%), Postives = 163/326 (50.00%), Query Frame = 0
Query: 537 FTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAG----QVAKAFGVY 596
F+ LIS G+SG + VF+ M G+ PN+ TY A+ID C + G QVAK F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE- 330
Query: 597 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACA 656
M+ V+PDR+ FN+L+ C + G + A ++ EM IE D + L+ A
Sbjct: 331 --MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM--TNRRIEQDVFSYNTLLDAIC 390
Query: 657 NAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEI 716
GQ+D A E+ + +I Y+ ++ +++ +D A +++ +M G+ D +
Sbjct: 391 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 450
Query: 717 FLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDL 776
+ L+ + G+ + A +IL E ++ + +V+Y++L+G + + +++ ++
Sbjct: 451 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 510
Query: 777 KSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDL 836
K + P + T + LI G + AM+I E K GL + + YS L A +N +
Sbjct: 511 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 570
Query: 837 EIAIMLLSQAKEDGIVPTLTMYKCII 859
A+ L+ + ++GI P + Y II
Sbjct: 571 GSAVSLIDEMTKEGISPNVVTYNSII 591
BLAST of Carg16198 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 141.0 bits (354), Expect = 5.8e-33
Identity = 105/371 (28.30%), Postives = 174/371 (46.90%), Query Frame = 0
Query: 537 FTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQVAKAFGVYGIMR 596
+ TLI K K+D F++ M G+EPN+ +Y +I+G R G++ + V M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 597 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALIKACANAGQ 656
+ D V +N LI + G +A + AEM H + P IT +LI + AG
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM--LRHGLTPSVITYTSLIHSMCKAGN 362
Query: 657 VDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTENGVQPDEIFLSA 716
++RA E + + YT V+ SQ + A V ++M +NG P + +A
Sbjct: 363 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 422
Query: 717 LIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQKALELYEDLKSMK 776
LI+ GK++ A +L + K LS +VSYS+++ + + +AL + ++
Sbjct: 423 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 482
Query: 777 LRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTAASERNDDLEIAI 836
++P T ++LI C+ ++ + A D+ EM +GL P+ TY+ L A DLE A+
Sbjct: 483 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 542
Query: 837 MLLSQAKEDGIVPTLTMYKCIIGMCLR--RTAEPSALDRSLLSHDSKLPQVNTQALMVYR 896
L ++ E G++P + Y +I + RT E L L +S V L+
Sbjct: 543 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 602
Query: 897 EIIEAGIVPSI 906
IE V S+
Sbjct: 603 SNIEFKSVVSL 611
BLAST of Carg16198 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 138.7 bits (348), Expect = 2.9e-32
Identity = 100/412 (24.27%), Postives = 187/412 (45.39%), Query Frame = 0
Query: 525 VQEAGMRADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGALIDGCARAGQ 584
+++ G D FT L+ K+G F+ M + G+ PN+HTY LI G R +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 585 VAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITI 644
+ A ++G M S VKP + I G+SG A + +M + I P+ +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM--KTKGIAPNIVAC 473
Query: 645 GALIKACANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFASSVYQDMTE 704
A + + A AG+ A++++ + D + Y + + C S+ + D A + +M E
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 533
Query: 705 NGVQPDEIFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGACSNAKNWQK 764
NG +PD I +++LI+ A ++D A+++ K + L +V+Y++L+ Q+
Sbjct: 534 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593
Query: 765 ALELYEDLKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPNNITYSILTA 824
A+EL+E + P T N L LC ++ +A+ +L +M +G P+ TY+ +
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653
Query: 825 ASERNDDLEIAIMLLSQAKEDGIVPTLTMYKCIIGMCLRRTAEPSALDRSLLSHDSKLPQ 884
+N ++ A+ Q K+ +Y + +C T P + SL+ K+
Sbjct: 654 GLVKNGQVKEAMCFFHQMKK-------LVYPDFVTLC---TLLPGVVKASLIEDAYKI-- 713
Query: 885 VNTQALMVYREIIEAGIVPSIEVLSQVLGCLQIPHDPALKSRLIENIGVCAD 937
+Y + + +++ +L I + + RL+ N G+C D
Sbjct: 714 ---ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN-GICRD 747
BLAST of Carg16198 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 138.3 bits (347), Expect = 3.7e-32
Identity = 109/438 (24.89%), Postives = 191/438 (43.61%), Query Frame = 0
Query: 466 PNPTLSTFNMLMSVCASSQDSD-----SKLMYSL-ISFNYFCLETISVVHNLCIVNLG-- 525
P P++ F+ L+S A D + M +L I N++ T S++ N C
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY---TYSILIN-CFCRRSQL 136
Query: 526 --AFQVMRLVQEAGMRADCKLFTTLISTCGKSGKVDAMFEVFHRMVNTGVEPNVHTYGAL 585
A V+ + + G + ++L++ S ++ + +M TG +PN T+ L
Sbjct: 137 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 196
Query: 586 IDGCARAGQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELH 645
I G + ++A + M +K +PD V + ++ + G D AF++L +M E
Sbjct: 197 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--EQG 256
Query: 646 PIEPDHITIGALIKACANAGQVDRAREVYKMIHDCKINGTPEVYTIAVNCCSQSCDWDFA 705
+EP + +I +D A ++K + I Y+ ++C W A
Sbjct: 257 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 316
Query: 706 SSVYQDMTENGVQPDEIFLSALIDVAGHAGKLDAAFEILGEAKTLALSVGIVSYSSLMGA 765
S + DM E + PD SALID GKL A ++ E ++ IV+YSSL+
Sbjct: 317 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 376
Query: 766 CSNAKNWQKALELYEDLKSMKLRPTVSTVNALITALCDGKQLQIAMDILTEMKGLGLYPN 825
+A +++E + S P V T N LI C K+++ M++ EM GL N
Sbjct: 377 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 436
Query: 826 NITYSILTAASERNDDLEIAIMLLSQAKEDGIVPTLTMYKCII-GMCLRRTAEPSALDRS 885
+TY+IL + D ++A + + DG+ P + Y ++ G+C E + +
Sbjct: 437 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 496
Query: 886 LLSHDSKLPQVNTQALMV 893
L P + T +M+
Sbjct: 497 YLQRSKMEPTIYTYNIMI 508
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7010874.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein MRL1, chloroplastic [Cucurbita argyr... | [more] |
XP_022944536.1 | 0.0e+00 | 91.32 | pentatricopeptide repeat-containing protein MRL1, chloroplastic-like [Cucurbita ... | [more] |
KAG6571044.1 | 0.0e+00 | 91.32 | Pentatricopeptide repeat-containing protein MRL1, chloroplastic, partial [Cucurb... | [more] |
XP_022987004.1 | 0.0e+00 | 90.43 | pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X1 ... | [more] |
XP_023512947.1 | 0.0e+00 | 89.99 | pentatricopeptide repeat-containing protein MRL1, chloroplastic [Cucurbita pepo ... | [more] |
Match Name | E-value | Identity | Description | |
Q0WLC6 | 3.3e-243 | 46.35 | Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis t... | [more] |
Q9SIC9 | 7.3e-33 | 27.91 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
Q9FIX3 | 8.1e-32 | 28.30 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9SZ52 | 4.0e-31 | 24.27 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
Q9SXD1 | 5.3e-31 | 24.89 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FY51 | 0.0e+00 | 91.32 | pentatricopeptide repeat-containing protein MRL1, chloroplastic-like OS=Cucurbit... | [more] |
A0A6J1JHM6 | 0.0e+00 | 90.43 | pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X1 ... | [more] |
A0A6J1JFL7 | 0.0e+00 | 89.28 | pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X2 ... | [more] |
A0A0A0LLH2 | 0.0e+00 | 80.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258850 PE=3 SV=1 | [more] |
A0A5D3BKV6 | 0.0e+00 | 80.55 | Pentatricopeptide repeat-containing protein MRL1 OS=Cucumis melo var. makuwa OX=... | [more] |