Carg16193 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16193
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein XAP5 CIRCADIAN TIMEKEEPER
Location	Carg_Chr20: 3783186 .. 3787885 (-)
RNA-Seq Expression	Carg16193
Synteny	Carg16193

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACTCGTAGGGTATTTAACCCCAAGTGCCATCTCCGATCAAGTCCGAAAGGCGGCAATTAGCTAGGAGGTGTAACGCAGGCCACACCGGCCACGACGGTAGGTAGGTCGGGAAAAAATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGGTTCTTTTTCAATTTCCATCTTTAGGGCTACTTTCAACATTAGGATTTGTTTCAGAACTATCTCTAGTTCTTTAGTCTGTGGACCTGCAGTTAGGTTTTTTGAGGATTGGCGTGCGGAAACATAAGGAACCGAAGTATAGTTTTTCGATTTTTGAATCCACTATACATCTATTTGAATTTGAACATCGCACGATCTCGGTTAGAAAGCTTGTCTGGAATTTTTAATTGTTGTTCTTGGTATTTCAGATACTCGAGACAGCGTTCAAGAAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGGTAAAGTTAGAAAATATGATACAAGAACTTTTCCTTATACCGCTAATAGAAGCATATGGCGCGTAATAAAGTTATAAACCGTTTGTTCTTGTTGATATAACTGTAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGTAAGTTGTTCTGTCTCTTGTTCATCTTCTATTGGACAAATTTCGGCCGCCTTCCATTCATTGGTTTTTTCTCTGTTTTCAGGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAGGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGATGATAATAGTAAGCGATTTTCTTGCTGAATCTGAAATAGTTGGTATTAGTGAACTTTTATTTACAATCAGCCGAGATCGATATACTTCATTCTAGTACGATGAGAATTCTGTGGTATACATTGTATTCCATTTTAGAATAATAGTTTGAAGGAAATTGAATTCTCATGTCAATGCTAAGATGTTACTAGCCATGTCCACTTAATAATCCAAACTTGTGCTTATGCATCATAGAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGGTATGGCGTCTTTCATTCTCTCATCCTCCCTATATCTTTTACATCTTTTATGGGATTAACGTTTTAGCTTAGGGGGGTTGAGGATTCTATTACAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAGTAATCTTATATTTGCCCGTGTATAGATTTCATGGTGGCATACTAGATAATTCGGTACCGAAAGAAATGACTAAATCTTTCCCTTGTATTGCAGATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGTTAATAATGATTATCTAACTTCGAACAATCCATTTTCTTCTTGCTTCCTGAACTCTACTTTTTAATGATTATCTAACTTCGAACAAATTCTCTATTGTTTTACTCTTTTAAATTCAACCTTGCATCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATTCCCCATGTAATATAATTTGGAATTTTTTTGGGATATTATTTTGGTTTTTTCCGCTTGGTGACTGTACTGAGTATTTATTGTATCGTGCAGCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGGTAAGCCTTCTATTTGTAATTTGAAAATTTAATTCCTTCTCCACTGAATGCATTAAGAGTTCACATTTTTCTATGTTCAGGTGTCTTCAAGATGTAATAACTTAAAACTTTGTTGTTTCATGTCTCTGATATAGATTTCAGGTTTAACGAAATTTAATACTCGTTATTGAAGATTAGGGTTTGGTGGGCTTGTTTTTTTGTGTACCCTTGTATCTTCTTTCTTATCTTTCAATAAAAACTTGGTTTCTCATTAGTATTTTTTTTTCGAACAGTTTTGTCAAGTTTTTATTTAGGGTATCTTTGATAACCATTTGGTTTTTGGTTTTTGAAAATTAAGGTTATAAACACTACTTTCACCCATGAGTTTATATGTTTGTTCATCTAAGAAAATAAGTTTTCGAAAAGTAAATAATTTGACTAGGAATTCAAGTGTTTCTGTAAGAAAGGTGAAAATCGTAATTGAAAATTTTGGAAGGAACAGGTACAAATTTCAAGAATAGAAAACGAAAAACCAAATTGTTAGTGAATGGGGCTTACTGTCACTTTTCTGTTTTCATGTACTTGCAATTGTGTTTATTTTTTATTTTTTTGTTATCAATTTTATGACGGGCTGAGAAATTTTTGCTTCTTGATAGTTAGCGGCTTTTAGAGTTTTTACGTTTGTTTATCTCATGCGAGCAAAAAACTGACTGACTTTTCACCTTGAGAGTGTATGTAACATGAGTGACATAAAAAAAACAAAAACCCTGTTACATCTTGTACATGTCCGACACCATGTAAACTCTTGTCTTATTAAATTTGAGTGAACTTATTTTAGCATTTTGTTTCGATGTTGCTCAGCTTTTCCACTTTGACGTGCATGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGGTATATTTTCAAATTGATTTTATATGCATGCGTCTTGTGATTGCTTGATATCGAAAGTTTAGTGAAGTCTGTGGAAACAGTGTATCTTTATATTCTTCAGTTAGTCGTGTGTACAAATTATTCGCCATGTTTAAACGCTTCAGCCCCTTGTTTTTGTTTTACAACGATGACAAATCTTGTGAGCTAATTACGGAATGATTTAGTTTGCTAATCCTTCTATCCCAGTGCACTTACTTCTACAATTTAGATGGTAGAGATCTCTTATATATCAATATTTCATTGTTTTGATGGAATATACCAGAAAAGAACAAAAAACTAGCGATTACATAAGAAACTGGAAACAGAAGGCCCTTAAATATTATAAGCATTTGATACTATGGAGTTGCCATCTATGTTGTTTTTCTGCTCCTTTGCGAGGTTTGATCAAACGCGTGTTGCAACTTGAAAAAAGTGTGTGAAGAAGAGTGAACTTAAGTCCTAAAATTTCTTCTTCCTCCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGAAAGGAGGATGGTAATAATAGTAGTATTATCAAGAGCATAACTTGTAAGAGGCATATTCTTCTGTTCTGCATTAACATAAAATTTTAGGATTTGTACAAAACAGAAGAAGATGCCTCTTCACATGTGAGATCCTTTATCGGTTGGAGTGGAGAACGAAATATTCTTTATAAGGGTGTGGAAACCTCTTCCTAACAAGTATGTTTTAAAACTTTGAGAGGAAGTCCAGAAGGGGAAGCCTAAAGTGGACAATATCTACTAGTGGTGGGCTTAGACTATTACAAATGGTATCAGAGACAGACACTGGGTGGTGTGCTAACGAGGACGCTGGACCCCAAGGGTGGTGGATTGTGAGATCCCATGTCGGTTGGAGAGGAGAACGAAATATTATTTATAAGGGTGTGGAAACCTCTATCTAACCTAAGTTGTTCAAAACTTCGAGGAAAGGAAAGTCCAAAGAGGACAATATTTGCTGTTACCTCACGAGTTAACTACTATTATCATTTTATAAATTCATCATTTGTATTATTTTGTTCTTGGACAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGGTGAGCTATCTCTCTGGCTCTGCTCGTTTGCTTGATCGTGTGATTGTTCTCACAAACTTTAATCCCCTGACATACCGTTCCCTGCTTTACCTATTCGTTGCAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGAGACTAATTCAATGACATATATCAAAAGAAGTATGATTTATGCCTTGAATCCTCAGTTTTTCTTACTGCTGTCTTCTTATACACGCTGAGTATGTTAGAAATCTTGAAGGAATTTGAAGAAATTAACTGGCTGGCTAATGATGTGCATTGTGTTATTTAAGCATTTAGCCTGTGGGATTGAGATGTTCATATTGTTCAGCACTTTGGCTTCTGAAACTTGTTTAGGGTGGGTTGATCTTCCATTGATATTGATCAATTTGCTTCAACTAGACTTTTAGTGTACCATAGAGGTGAAATATTTTAAGTAATCTATTTGATCTCTCAGTACTTTTATGGGTGTTTGGTTGATGTTTATTAGATGAGAATGGGCAATTTTAAAAAAGTGACCTATTTGTTTGGTCCACGTAGCAGGGTGGAGACGAAGACGGGAAGTATAATCTCGTCCTCGGCCCTCTAACGGGAATAAATGCTCTCTACTCTCTCCCCCA

mRNA sequence

ATAAACTCGTAGGGTATTTAACCCCAAGTGCCATCTCCGATCAAGTCCGAAAGGCGGCAATTAGCTAGGAGGTGTAACGCAGGCCACACCGGCCACGACGGTAGGTAGGTCGGGAAAAAATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGTTAGGTTTTTTGAGGATTGGCGTGCGGAAACATAAGGAACCGAAATACTCGAGACAGCGTTCAAGAAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAGGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGATGATAATAAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATTCCCCATCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGCTTTTCCACTTTGACGTGCATGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGAGACTAATTCAATGACATATATCAAAAGAAGTATGATTTATGCCTTGAATCCTCAGTTTTTCTTACTGCTGTCTTCTTATACACGCTGAGTATGTTAGAAATCTTGAAGGAATTTGAAGAAATTAACTGGCTGGCTAATGATGTGCATTGTGTTATTTAAGCATTTAGCCTGTGGGATTGAGATGTTCATATTGTTCAGCACTTTGGCTTCTGAAACTTGTTTAGGGTGGGTTGATCTTCCATTGATATTGATCAATTTGCTTCAACTAGACTTTTAGTGTACCATAGAGGTGAAATATTTTAAGTAATCTATTTGATCTCTCAGTACTTTTATGGGTGTTTGGTTGATGTTTATTAGATGAGAATGGGCAATTTTAAAAAAGTGACCTATTTGTTTGGTCCACGTAGCAGGGTGGAGACGAAGACGGGAAGTATAATCTCGTCCTCGGCCCTCTAACGGGAATAAATGCTCTCTACTCTCTCCCCCA

Coding sequence (CDS)

ATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGTTAGGTTTTTTGAGGATTGGCGTGCGGAAACATAAGGAACCGAAATACTCGAGACAGCGTTCAAGAAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAGGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGATGATAATAAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATTCCCCATCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGCTTTTCCACTTTGACGTGCATGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGAGACTAA

Protein sequence

MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGFLRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD

Homology

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BLAST of Carg16193 vs. NCBI nr
Match: KAG7010869.1 (Protein XAP5 CIRCADIAN TIMEKEEPER [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674.5 bits (1739), Expect = 5.0e-190
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
           LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 348

[Close]

BLAST of Carg16193 vs. NCBI nr
Match: XP_022987006.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita maxima])

HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-173
Identity = 326/348 (93.68%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. NCBI nr
Match: XP_022944547.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita moschata])

HSP 1 Score: 619.8 bits (1597), Expect = 1.5e-173
Identity = 325/348 (93.39%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRK+GCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKVGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. NCBI nr
Match: XP_023513348.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.0 bits (1595), Expect = 2.5e-173
Identity = 325/348 (93.39%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKI+GNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIKGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. NCBI nr
Match: XP_022987007.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita maxima] >KAG6571039.1 Protein XAP5 CIRCADIAN TIMEKEEPER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 614.0 bits (1582), Expect = 8.0e-172
Identity = 325/348 (93.39%), Postives = 327/348 (93.97%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK PRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK-PRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Carg16193 vs. ExPASy Swiss-Prot
Match: Q8H110 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana OX=3702 GN=XCT PE=1 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.6e-154
Identity = 288/352 (81.82%), Postives = 309/352 (87.78%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ E+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLQKQREAERKKIQELKSKSASGNDQSGLLQFGTSSCEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNK EEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKR-RKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIG---CGKLGKDPTVETSFLPD 180
           QL+KR +KRKI+G+SRLSF++DFENGSDEDD   +    G   CGKLGKDP+VET+FLPD
Sbjct: 121 QLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPD 180

Query: 181 SEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRT 240
           SEREAEEQAERERLKKQWLREQEQI+NEPLEITYSYWDG GHRRVIQ RKGD IG FLR 
Sbjct: 181 SEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRA 240

Query: 241 VQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVR 300
           VQQQLAP+FREIRT SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVR
Sbjct: 241 VQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVR 300

Query: 301 TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 301 TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTVHGD 337

[Close]

BLAST of Carg16193 vs. ExPASy Swiss-Prot
Match: B8BDW1 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica OX=39946 GN=XCT PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 4.3e-152
Identity = 288/350 (82.29%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S+ GQPGLLQFGSSTSE+  
Sbjct: 1   MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNK--SSDGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTRE+YVEKRVNIR KIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDD-DNKEP-RKIGCGKLGKDPTVETSFLPDSE 180
           Q+QKR+KR++RG+ RLSF D+ ENGSDED+ +N+EP +K G  KLGKDPTVETSFLPD E
Sbjct: 121 QMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKHGPVKLGKDPTVETSFLPDRE 180

Query: 181 REAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQ 240
           REAEEQAERERLKKQW REQE I+NEPL ITYSYWDG GHRRVIQ RKGD+IGEFLR VQ
Sbjct: 181 REAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQ 240

Query: 241 QQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTI 300
           QQLAPEFRE+RTTSVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTI
Sbjct: 241 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTI 300

Query: 301 ADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ADAT EKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ADATKEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. ExPASy Swiss-Prot
Match: Q69JZ7 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica OX=39947 GN=XCT PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 4.3e-152
Identity = 288/350 (82.29%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S+ GQPGLLQFGSSTSE+  
Sbjct: 1   MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNK--SSDGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTRE+YVEKRVNIR KIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDD-DNKEP-RKIGCGKLGKDPTVETSFLPDSE 180
           Q+QKR+KR++RG+ RLSF D+ ENGSDED+ +N+EP +K G  KLGKDPTVETSFLPD E
Sbjct: 121 QMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKHGPVKLGKDPTVETSFLPDRE 180

Query: 181 REAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQ 240
           REAEEQAERERLKKQW REQE I+NEPL ITYSYWDG GHRRVIQ RKGD+IGEFLR VQ
Sbjct: 181 REAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQ 240

Query: 241 QQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTI 300
           QQLAPEFRE+RTTSVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTI
Sbjct: 241 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTI 300

Query: 301 ADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ADAT EKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ADATKEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. ExPASy Swiss-Prot
Match: Q568K9 (Protein FAM50A OS=Danio rerio OX=7955 GN=fam50a PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 8.5e-76
Identity = 163/358 (45.53%), Postives = 233/358 (65.08%), Query Frame = 0


Query: 8   YVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGFLRIGVRK 67
           Y G A +A R  +L K+RE ER ++++LK K A                E   ++  + K
Sbjct: 4   YKGAASEAGRAMQLMKKREREREQLEQLKQKIA----------------EDNMVKSNIDK 63

Query: 68  HKEPKYS--RQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKR 127
                Y    Q  +  TVGLVT  +   K+  +   ++E EK+  +K Q +E +L+L+K+
Sbjct: 64  KFSAHYDAVEQELKSSTVGLVTLNDMKAKQEAL---VKEREKQLAKKEQSKELQLKLEKQ 123

Query: 128 RKRKIRGNSR-----LSFSDDFENGSDEDDDNKEPRK-------------IGCGKLGKDP 187
           +++K +   +     LSF+ D   G DE+++ +E  +             +   KLGK+P
Sbjct: 124 KEKKRKEEQKRKIASLSFNPD--EGEDEEEEEEEEEEEEEDEIEEEICLPVKKKKLGKNP 183

Query: 188 TVETSFLPDSEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKG 247
            V+TSFLPD +RE EE   RE L+++W R+QE+I++E +EIT+SYWDG+GHR+ ++ +KG
Sbjct: 184 DVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRKTVKMKKG 243

Query: 248 DTIGEFLRTVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLF 307
           +TI +FL+   + L  +F E+R+  VE+L+Y+KEDLIIPH HSFY+ IV KARGKSGPLF
Sbjct: 244 NTIQQFLQRALEVLRKDFSELRSAGVEHLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLF 303

Query: 308 HFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTI 346
           +FDVH+D+R + DAT+EKDESHAGKVV R WYEKNKHIFPASRWE YDP KKW++YTI
Sbjct: 304 NFDVHDDIRLVNDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTI 340

[Close]

BLAST of Carg16193 vs. ExPASy Swiss-Prot
Match: Q28BK4 (Protein FAM50A OS=Xenopus tropicalis OX=8364 GN=fam50a PE=2 SV=2)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-75
Identity = 166/365 (45.48%), Postives = 234/365 (64.11%), Query Frame = 0


Query: 8   YVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGFLRIGVRK 67
           Y G A +A R  +L K+RE +R +++++K K A                E   ++  + K
Sbjct: 4   YKGAASEAGRAMQLMKKREKQREQLEQMKQKIA----------------EENVVKANINK 63

Query: 68  HKEPKYSRQRS--RKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKR 127
                Y    +  +  TVGLVT  +   K+  +   ++E EK+  +K Q ++ +L+L+K+
Sbjct: 64  KFSAHYDAVEAELKSSTVGLVTLNDMKAKQEAL---VKEREKQLAKKEQFKDLQLKLEKQ 123

Query: 128 RKRKIRGNSR-----LSFS----------------DDFENGSDEDDDNKEPRKIGC---- 187
           R+R+ +   +     LSF+                DD E+  DEDDD+ +  K       
Sbjct: 124 RERERKKEQKRKIASLSFNLEEDEECEDEEADDDYDDEEDDDDEDDDDDDAEKEELPKKK 183

Query: 188 GKLGKDPTVETSFLPDSEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRR 247
            KLGK+P V+TSFLPD +RE EE   RE L+++W R+QE+I++E +EIT+SYWDG+GHRR
Sbjct: 184 KKLGKNPDVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRR 243

Query: 248 VIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKAR 307
            ++ +KG++I +FL+   + L  +F E+R+  VE L+Y+KEDLIIPH HSFY+ IV KAR
Sbjct: 244 TVKMKKGNSIQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKAR 303

Query: 308 GKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKW 346
           GKSGPLF+FDVHEDVR ++DAT+EKDESHAGKVV R WYEKNKHIFPASRWE YDP KKW
Sbjct: 304 GKSGPLFNFDVHEDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKW 349

[Close]

BLAST of Carg16193 vs. ExPASy TrEMBL
Match: A0A6J1JCW5 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484583 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.4e-174
Identity = 326/348 (93.68%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. ExPASy TrEMBL
Match: A0A6J1FVX9 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448966 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.1e-174
Identity = 325/348 (93.39%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRK+GCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKVGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Carg16193 vs. ExPASy TrEMBL
Match: A0A6J1J955 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484583 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.9e-172
Identity = 325/348 (93.39%), Postives = 327/348 (93.97%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK PRKIGCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK-PRKIGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Carg16193 vs. ExPASy TrEMBL
Match: A0A6J1FY54 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448966 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 5.1e-172
Identity = 324/348 (93.10%), Postives = 327/348 (93.97%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSERE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK PRK+GCGKLGKDPTVETSFLPDSERE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK-PRKVGCGKLGKDPTVETSFLPDSERE 180

Query: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240
           AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ
Sbjct: 181 AEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQ 240

Query: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300
           LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD
Sbjct: 241 LAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIAD 300

Query: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Carg16193 vs. ExPASy TrEMBL
Match: A0A0A0LM87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263920 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.4e-169
Identity = 321/350 (91.71%), Postives = 326/350 (93.14%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSE+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK--EPRKIGCGKLGKDPTVETSFLPDSE 180
           QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNK  EP+K+G GKLGKDPTVETSFLPDSE
Sbjct: 121 QLQKRRKRKIRGNSRLSFSDDFENGSDEDDDNKNLEPKKLGRGKLGKDPTVETSFLPDSE 180

Query: 181 REAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQ 240
           REAEEQAERERLK+QWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLR VQ
Sbjct: 181 REAEEQAERERLKRQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRAVQ 240

Query: 241 QQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTI 300
           QQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTI
Sbjct: 241 QQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTI 300

Query: 301 ADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           ADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 ADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 335

[Close]

BLAST of Carg16193 vs. TAIR 10
Match: AT2G21150.1 (XAP5 family protein )

HSP 1 Score: 545.4 bits (1404), Expect = 3.3e-155
Identity = 288/352 (81.82%), Postives = 309/352 (87.78%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSELGF 60
           MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ E+  
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLQKQREAERKKIQELKSKSASGNDQSGLLQFGTSSCEI-- 60

Query: 61  LRIGVRKHKEPKYSRQRSRKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEEL 120
                             +KETVGLVTREEYVEKRVNIRNK EEEEKEKLQKLQQEEEEL
Sbjct: 61  -------------LDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEEL 120

Query: 121 QLQKR-RKRKIRGNSRLSFSDDFENGSDEDDDNKEPRKIG---CGKLGKDPTVETSFLPD 180
           QL+KR +KRKI+G+SRLSF++DFENGSDEDD   +    G   CGKLGKDP+VET+FLPD
Sbjct: 121 QLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPD 180

Query: 181 SEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRT 240
           SEREAEEQAERERLKKQWLREQEQI+NEPLEITYSYWDG GHRRVIQ RKGD IG FLR 
Sbjct: 181 SEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRA 240

Query: 241 VQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVR 300
           VQQQLAP+FREIRT SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVR
Sbjct: 241 VQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVR 300

Query: 301 TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 349
           TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 301 TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTVHGD 337

The following BLAST results are available for this feature:

BLAST of Carg16193 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010869.1	5.0e-190	100.00	Protein XAP5 CIRCADIAN TIMEKEEPER [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022987006.1	1.1e-173	93.68	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita maxima]	[more]
XP_022944547.1	1.5e-173	93.39	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita moschata]	[more]
XP_023513348.1	2.5e-173	93.39	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022987007.1	8.0e-172	93.39	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita maxima] >KAG6571039.1 Pr...	[more]

BLAST of Carg16193 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H110	4.6e-154	81.82	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana OX=3702 GN=XCT PE=1 SV...	[more]
B8BDW1	4.3e-152	82.29	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica OX=39946 GN=XCT ...	[more]
Q69JZ7	4.3e-152	82.29	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica OX=39947 GN=XC...	[more]
Q568K9	8.5e-76	45.53	Protein FAM50A OS=Danio rerio OX=7955 GN=fam50a PE=2 SV=1	[more]
Q28BK4	1.5e-75	45.48	Protein FAM50A OS=Xenopus tropicalis OX=8364 GN=fam50a PE=2 SV=2	[more]

BLAST of Carg16193 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCW5	5.4e-174	93.68	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FVX9	7.1e-174	93.39	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J955	3.9e-172	93.39	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FY54	5.1e-172	93.10	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0LM87	1.4e-169	91.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263920 PE=4 SV=1	[more]

BLAST of Carg16193 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21150.1	3.3e-155	81.82	XAP5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..133
None	No IPR available	COILS	Coil	Coil	coord: 178..198
None	No IPR available	COILS	Coil	Coil	coord: 18..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..163
None	No IPR available	PANTHER	PTHR12722:SF3	BNAA04G11980D PROTEIN	coord: 223..348
None	No IPR available	PANTHER	PTHR12722:SF3	BNAA04G11980D PROTEIN	coord: 1..222
IPR007005	XAP5 protein	PFAM	PF04921	XAP5	coord: 104..344 e-value: 9.8E-73 score: 245.2
IPR007005	XAP5 protein	PANTHER	PTHR12722	XAP-5 PROTEIN-RELATED	coord: 223..348
IPR007005	XAP5 protein	PANTHER	PTHR12722	XAP-5 PROTEIN-RELATED	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16193-RA	Carg16193-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0009637	response to blue light
biological_process	GO:0010114	response to red light
cellular_component	GO:0005634	nucleus