Carg16139 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16139
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sorcin-like
Location	Carg_Chr20: 3466574 .. 3470292 (+)
RNA-Seq Expression	Carg16139
Synteny	Carg16139

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATAAATGACGTTCCCATCCGCATAACCTTTTTCGGGGGTAAAAATTCGATCCCCTCCGTGAAGAACAATATCCCCTCAGGGCTGCAAATGATAATCAAATAGTTTTACTGTAAATGGAGAATACGGGAATTCTGAAGGAGTGGTTCGATCGAGTTGATTCGGAGAAGTCTGGAAGCATCATAGCTCCTCAGCTTCAGGTTGATCTTCTTGTTTTTCTTATTCAAAGATTTTATCCTCTTCGTCTCAAAGTCCCGATCGTTGACAAAATTTCTGGATTCCTCCATGATCAGAATGCTCTGGCGGTTGGAAACCTCAACTTTCCTCTCTCAATTGTGCAGCAAATGATCAGGTTTCCGAAGTCTCTTATTCTTATCATCTCTGTAAAGAATTTTCTGCTGATTGTTATTATTATTTTTTGGCTAGGATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGCAAGTATGATAATATTTTATAGTGCGGCTTTTGTTTTCGTTTGAGAATCGGTATTTGATTTTGATGATCTCTCTGGTGTTGTGATGCATTTTTCACAGAGTTTGTAGCTCTCAACAAGTTCCTCATTAAGGTTTGTATTTTCGATGATTTTTCTATCTTATGATAGTCTTGAAATTATGTTCAGTTTAATCTTTTGTGAATATGAAAAACCAATTGAATCGAAGTATCTGATCTTCCTTCGATCTTCTGATTACTTTAATTTCTGTTTCAGCTTCAGCAAGCCTTCTCTGACTTGGAAAGGTGAGTCGGAATTTTCTTTCGATAATTTTGATGACTACTTGAACCCTATCTTGCTTGACATAAAACATTTTATTAGAGAATTGTGTTGTAAATTGCTTGGAGATTTACAAATAATTTGAAACCATTATTCGTATGGCCAGATTGCTTTCTGTCTCCGTATCTGCCGTTGGCCAAATAAATTATATGTCCATAAATAGAAGTAGCCAGAACTCCTAGTTGGAGCTGAAAAGAACTTGAAATGCTTAGCTAATTTCTTGATGGATCTAAACGTGTCATCTCTTTGTTCGTTGTCACAGAGGTCGTGGTTATCTAGTCCCAGAGGATGTATACGAGGTGTGTATTTGGTTTTAAGTATTAACTTCTATGTATCTATTAGGATCAATTTGGAAAGAATAATATTCACAATGCGTTTGCATTTAAAATCGTTTACCTACTGAAATATCCTTTCAGGCATTGGTTAAGATTGGCTTCACGCTGGACTCTCCGGCGTTTTATACTGTCTGCGAGGTAAACCATATTTCACCACTGAAATAAAGAAATTTCAGTAGTCTTAAGTTTGTAAATTTCGTGGTGTCAAAGTTGGCATAACTTACCCTCGACCAAGGGATTTGATATTCGATTCCCCTTAGTTGGTATATATCGTGGTAAATTTGTATAGGTTAGAAGCTTGTTAATACCTTTAGAGATTGGTTTAGTGGAGTGATCAAGCTAATGAAACTTGATGGTTGGAACTTATCTTTAAAACTTGATTAGCAGTCCTTGACTGCTTACTTCAGAGTCATAATGAAAATTAGTGAAAATTGCGTGCATGGGGTGTTGAATCATAAGATAATTGACGCATGAAGATACATACATTCATTAGTGGAGTGTTAACAAGCAATCCTCACCCCCTCCATCTACCTCTTAAACGAGGAAGATGAAGGAAGTAATATTCAGCATAAACCATTCTTTTGTAATCTTCCATTAGAGAGCCGTCTTTTTCCATCTCTCCATTTTGTCTTTTTGGTTGGTTGCTCTCATCCTTCTAATTATCTTTTTTGTAAAAGGAACTCTGCCTCGCCATTTTTTTTCATCCACAATGCTTTGTATGTGTGATTTATTTGGTTTGCTGCTTTGAAGATGGAATCTGCCTTTCAAAACATTTAGTTATGCAGGACATAATGATTGTGAGTAGGATGAATGGGTATCTATTTCCTGTAACAGTTTGGTGATCTGAACTTCTATTATATTTCTATATATATTTGCAGAGCTTTGATCAGAAGAAAAATGGGAGATTTCGGCTTGATGACTTCATATCTCTCTGTATATTTGTTCAATCAGCTAGGTAGGTTCACTGTTAAATTGGTCAATTTCATTCTTCTGTTGGCTTATCTTCTGACGAAAAATTCCTCTTTTCATTTTTTTTTTTGGTGGGGGCTCCCATATGCGTGTGTATAATTTTCTTTCATTTGACCAAATCAAAAGTTTACAAGCCTATTTGACTATTTGACATTTTTGAAGTTAAGGACGGGTTAGTTGTTCTTTAAACTTCATGACCTATTAGATACAAATACAAAAGTTTAGGAACTAGATTTGTAATTAACCTTCATTCTTAATTTTAATTATGCAGCTGATTTTCCTTAGAGACTTGTGTTTTGAATTTTTCTAGTAGTTCTCTAGTTGGTAGAAATCTAACATTGTCTTTTGATTATTTGAAGTTTCACTAAAAAAAAAAAAAAAATCCGATTGGTTGCAGGAATTTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGGGTGACTCTAGATCTCAACCAATTTGTCTATTGCAGTGAGTATCTGAATTTTAACTCTCGTCTTTTCCAAGCATGTTGTGAATTCATTTTCCTCGTAGTTTGGCGTTTTTATGTTATTCCCTGCCCTCACCTAACAAATTAACCACGGATTAGAGATTGGTGTTGTTATTACTAGATTTTCCCAAGTGTTTAGTGCTCTGTTTGTTTGAGTATTAAATTATAGATGTAAGAGGACATGAGGCAGAATACAATAAATTGCCATCGTTTTTTGTCATGATCTGATATATTAACCCAAGGGGTGGCCGCGCCGGCAAGGACTCGAGGCCTTTTGGTCATACCGGCCTATAAAGTCCAAAGTTTGAATCTTCAGAGGAGCTTAACACCAAAAAAACTCTGACCCACACAGCCATATTATTGTCAGCCTACCTAGAGATCAAACACTCCCCCTGGCATATTGGCTAGGGCGATCGCTTAGTCACCGACGTTGCTGTTGTTCGTTCCTGATGTTTGCAGATTGATATTAATTAGTAATCGTGAGCCTACCCCTAAAGCACATCTAACTCGGAACTCAAAATATTCACTGTTCAATTTCTTGCTGTCTAATTTGAAGCACCTGTGTGCTAACTACTGATTGATTTGTTCCTTCACGTTTCCTTTCAGCTGCTAATTGCAGAATATGAAAGTGTAAATATTTTCAACGAAGAGGTGACAGCATAGCATACTGCAGAAACTGTTGGTGCAACCTGTGGATTTAAAATGGTAGGATATGAACTGTAAACTTACTTTTCTGTAGCATAATCTATCTTGCTTGTTTATCTTTTGGTTTGGATCCTTGTCTTCGATGCTGGAAAAGGCTTTATATGATTGGAAAACTAGTAATTGAGTTCTATTCATCTACCATATAGCCCGTACGTATATTTTCTTGTAGCCATTCAGTTATATGATTAGTCAATATATTGGTTTATTTTGTTAGTTTCATATTATTATTCGTAAATACCGTTATGTAGAAATGAACTCCTGTACACTTGATTACCAATATTATCATTTTCATTTTGTACTATTTCTAAAATGAACTCCTCTACACTTATTACCAATATTACCAATGAAACATGCAGTTATTATAACATATCTTAGAAATATATGATTAGTGGTTATCAGACCTCATGGCTAAATTTC

mRNA sequence

AAATATAAATGACGTTCCCATCCGCATAACCTTTTTCGGGGGTAAAAATTCGATCCCCTCCGTGAAGAACAATATCCCCTCAGGGCTGCAAATGATAATCAAATAGTTTTACTGTAAATGGAGAATACGGGAATTCTGAAGGAGTGGTTCGATCGAGTTGATTCGGAGAAGTCTGGAAGCATCATAGCTCCTCAGCTTCAGGTTGATCTTCTTGTTTTTCTTATTCAAAGATTTTATCCTCTTCGTCTCAAAGTCCCGATCGTTGACAAAATTTCTGGATTCCTCCATGATCAGAATGCTCTGGCGGTTGGAAACCTCAACTTTCCTCTCTCAATTGTGCAGCAAATGATCAGGATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGCAAAGTTTGTAGCTCTCAACAACTTCAGCAAGCCTTCTCTGACTTGGAAAGAGGTCGTGGTTATCTAGTCCCAGAGGATGTATACGAGGCATTGGTTAAGATTGGCTTCACGCTGGACTCTCCGGCGTTTTATACTGTCTGCGAGAGCTTTGATCAGAAGAAAAATGGGAGATTTCGGCTTGATGACTTCATATCTCTCTGTATATTTGTTCAATCAGCTAGGAATTTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGGGTGACTCTAGATCTCAACCAATTTGTCTATTGCACTGCTAATTGCAGAATATGAAAGTGTAAATATTTTCAACGAAGAGGTGACAGCATAGCATACTGCAGAAACTGTTGGTGCAACCTGTGGATTTAAAATGGTAGGATATGAACTGTAAACTTACTTTTCTGTAGCATAATCTATCTTGCTTGTTTATCTTTTGGTTTGGATCCTTGTCTTCGATGCTGGAAAAGGCTTTATATGATTGGAAAACTAGTAATTGAGTTCTATTCATCTACCATATAGCCCGTACGTATATTTTCTTGTAGCCATTCAGTTATATGATTAGTCAATATATTGGTTTATTTTGTTAGTTTCATATTATTATTCGTAAATACCGTTATGTAGAAATGAACTCCTGTACACTTGATTACCAATATTATCATTTTCATTTTGTACTATTTCTAAAATGAACTCCTCTACACTTATTACCAATATTACCAATGAAACATGCAGTTATTATAACATATCTTAGAAATATATGATTAGTGGTTATCAGACCTCATGGCTAAATTTC

Coding sequence (CDS)

ATGGAGAATACGGGAATTCTGAAGGAGTGGTTCGATCGAGTTGATTCGGAGAAGTCTGGAAGCATCATAGCTCCTCAGCTTCAGGTTGATCTTCTTGTTTTTCTTATTCAAAGATTTTATCCTCTTCGTCTCAAAGTCCCGATCGTTGACAAAATTTCTGGATTCCTCCATGATCAGAATGCTCTGGCGGTTGGAAACCTCAACTTTCCTCTCTCAATTGTGCAGCAAATGATCAGGATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGCAAAGTTTGTAGCTCTCAACAACTTCAGCAAGCCTTCTCTGACTTGGAAAGAGGTCGTGGTTATCTAGTCCCAGAGGATGTATACGAGGCATTGGTTAAGATTGGCTTCACGCTGGACTCTCCGGCGTTTTATACTGTCTGCGAGAGCTTTGATCAGAAGAAAAATGGGAGATTTCGGCTTGATGACTTCATATCTCTCTGTATATTTGTTCAATCAGCTAGGAATTTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGGGTGACTCTAGATCTCAACCAATTTGTCTATTGCACTGCTAATTGCAGAATATGA

Protein sequence

MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI

Homology

[Close]

BLAST of Carg16139 vs. NCBI nr
Match: KAG7010818.1 (hypothetical protein SDJN02_27614 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQLQQAFSDLERGRGYLVPEDV 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQLQQAFSDLERGRGYLVPEDV
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQLQQAFSDLERGRGYLVPEDV 120

Query: 121 YEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGR 180
           YEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGR
Sbjct: 121 YEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGR 180

Query: 181 VTLDLNQFVYCTANCRI 198
           VTLDLNQFVYCTANCRI
Sbjct: 181 VTLDLNQFVYCTANCRI 197

[Close]

BLAST of Carg16139 vs. NCBI nr
Match: XP_022943751.1 (sorcin-like [Cucurbita moschata] >XP_022986228.1 sorcin-like [Cucurbita maxima] >KAG6570981.1 hypothetical protein SDJN03_29896, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-79
Identity = 159/200 (79.50%), Postives = 162/200 (81.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSIIAPQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLIKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK
Sbjct: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. NCBI nr
Match: XP_023511846.1 (sorcin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 158/200 (79.00%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSIIA QL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIASQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLIKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK
Sbjct: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. NCBI nr
Match: XP_004139969.1 (sorcin isoform X2 [Cucumis sativus] >KGN46663.1 hypothetical protein Csa_005521 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-76
Identity = 154/200 (77.00%), Postives = 159/200 (79.50%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSI APQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSITAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPHSIVQQMIRMYDFDRNGTMSFEEFVALNKFLLKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           +DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA N+FNSFDTAK
Sbjct: 121 DDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNMFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. NCBI nr
Match: XP_022140739.1 (sorcin-like isoform X2 [Momordica charantia])

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-75
Identity = 152/200 (76.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGS+ APQL                               Q 
Sbjct: 1   MENTGILKEWFDRVDSEKSGSVTAPQL-------------------------------QK 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRG+LVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLLKLQQAFSDLERGRGFLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
            DVYEALVKIG+TLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAK
Sbjct: 121 NDVYEALVKIGYTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. ExPASy Swiss-Prot
Match: Q94743 (Sorcin OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10
Identity = 54/193 (27.98%), Postives = 77/193 (39.90%), Query Frame = 0


Query: 3   NTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNAL 62
           +T  L+  F RVD++KSGSI A +LQ  L                               
Sbjct: 4   DTNSLRHIFSRVDADKSGSISANELQTSL------------------------------- 63

Query: 63  AVGNLNFPLSI--VQQMIRMYDFDRNGTMSFE---GKVCSSQQLQQAFSDLER-GRGYLV 122
               L  PL+I  VQ M+ M+D D NGT++F    G     Q  Q  F   +R   G + 
Sbjct: 64  -SNGLGTPLNIRTVQLMVAMFDRDMNGTINFNEFLGLFKYVQDWQTCFRRYDRDNSGSID 123

Query: 123 PEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTA 182
             +   AL+  G+ L SP F  +      +  G    DDFI  C+ +Q+    F+ +D  
Sbjct: 124 LNEFSNALISFGYHL-SPQFVNLMMRRFDRNRGSIAFDDFIYACVCLQTLTREFSRYDCR 163

Query: 183 KQGRVTLDLNQFV 190
             G       QF+
Sbjct: 184 GIGHTVFSFEQFL 163

[Close]

BLAST of Carg16139 vs. ExPASy TrEMBL
Match: A0A6J1JFX0 (sorcin-like OS=Cucurbita maxima OX=3661 GN=LOC111484048 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 159/200 (79.50%), Postives = 162/200 (81.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSIIAPQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLIKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK
Sbjct: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. ExPASy TrEMBL
Match: A0A6J1FSK3 (sorcin-like OS=Cucurbita moschata OX=3662 GN=LOC111448408 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 159/200 (79.50%), Postives = 162/200 (81.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSIIAPQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLIKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK
Sbjct: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. ExPASy TrEMBL
Match: A0A0A0KAX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118890 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.0e-76
Identity = 154/200 (77.00%), Postives = 159/200 (79.50%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGSI APQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSEKSGSITAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPHSIVQQMIRMYDFDRNGTMSFEEFVALNKFLLKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           +DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA N+FNSFDTAK
Sbjct: 121 DDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNMFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. ExPASy TrEMBL
Match: A0A6J1CGJ0 (sorcin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011328 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.6e-76
Identity = 152/200 (76.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDSEKSGS+ APQL                               Q 
Sbjct: 1   MENTGILKEWFDRVDSEKSGSVTAPQL-------------------------------QK 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRG+LVP
Sbjct: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEEFVALNKFLLKLQQAFSDLERGRGFLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
            DVYEALVKIG+TLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAK
Sbjct: 121 NDVYEALVKIGYTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QGRVTLDLNQFVYCTANCRI
Sbjct: 181 QGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Carg16139 vs. ExPASy TrEMBL
Match: A0A1S4DX56 (sorcin-like OS=Cucumis melo OX=3656 GN=LOC103490457 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 152/200 (76.00%), Postives = 157/200 (78.50%), Query Frame = 0


Query: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQN 60
           MENTGILKEWFDRVDS  SGSI APQL                               QN
Sbjct: 1   MENTGILKEWFDRVDSANSGSITAPQL-------------------------------QN 60

Query: 61  ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ---QLQQAFSDLERGRGYLVP 120
           ALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++   +LQQAFSDLERGRGYLVP
Sbjct: 61  ALAVGNLNFPHSIVQQMIRMYDFDRNGTMSFEEFVALNKFLLKLQQAFSDLERGRGYLVP 120

Query: 121 EDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAK 180
           +DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAK
Sbjct: 121 DDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNLFNSFDTAK 169

Query: 181 QGRVTLDLNQFVYCTANCRI 198
           QG+VTLDLNQFVYCTANCRI
Sbjct: 181 QGKVTLDLNQFVYCTANCRI 169

The following BLAST results are available for this feature:

BLAST of Carg16139 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010818.1	1.6e-108	100.00	hypothetical protein SDJN02_27614 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943751.1	3.4e-79	79.50	sorcin-like [Cucurbita moschata] >XP_022986228.1 sorcin-like [Cucurbita maxima] ...	[more]
XP_023511846.1	2.9e-78	79.00	sorcin-like [Cucurbita pepo subsp. pepo]	[more]
XP_004139969.1	2.1e-76	77.00	sorcin isoform X2 [Cucumis sativus] >KGN46663.1 hypothetical protein Csa_005521 ...	[more]
XP_022140739.1	1.4e-75	76.00	sorcin-like isoform X2 [Momordica charantia]	[more]

BLAST of Carg16139 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94743	3.5e-10	27.98	Sorcin OS=Schistosoma japonicum OX=6182 PE=2 SV=1	[more]

BLAST of Carg16139 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFX0	1.7e-79	79.50	sorcin-like OS=Cucurbita maxima OX=3661 GN=LOC111484048 PE=4 SV=1	[more]
A0A6J1FSK3	1.7e-79	79.50	sorcin-like OS=Cucurbita moschata OX=3662 GN=LOC111448408 PE=4 SV=1	[more]
A0A0A0KAX1	1.0e-76	77.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118890 PE=4 SV=1	[more]
A0A6J1CGJ0	6.6e-76	76.00	sorcin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011328 PE=4 SV=1	[more]
A0A1S4DX56	2.5e-75	76.00	sorcin-like OS=Cucumis melo OX=3656 GN=LOC103490457 PE=4 SV=1	[more]

BLAST of Carg16139 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 2..195 e-value: 1.9E-23 score: 84.9
None	No IPR available	PANTHER	PTHR46212	PEFLIN	coord: 59..193
None	No IPR available	PANTHER	PTHR46212:SF3	PEFLIN	coord: 59..193
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16139-RA	Carg16139-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding