Carg16136 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16136
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein ZAT3-like
Location	Carg_Chr20: 3450662 .. 3451321 (-)
RNA-Seq Expression	Carg16136
Synteny	Carg16136

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCCTTCCCGTTCTCTGTTTCCCTTCACCGTTTTCCCCCATCCCTCTCCCTCCCATTCTTCCCTTCCGCCCCCCAATTCCCGCCGGAAGCGTACTAAGTTCATCAAACCCACCACCGCCGCCGCCCCTCTTCATTCTCCCTCCACTCCCAAGTCCAAGCACGCCAAGAAACCGGACCCTACCGCTCCCAAGATCACTCGCCCCTGTACTGAGTGCGGCAAGACGTTCTGGTCATGGAAGGCTCTGTTCGGCCATATGCGCTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATTTCCGCCGATCGACTGCCACTGACGAAGATCACGAAATCGCTGCCTGTTTGATTATGTTAGCGAATGGCCCTAATGCGATCGATCCAACTGAAGCGGTTACTGAAACGGATGGTGATTGTCGAGAAAATCAAGAATCGGCGGCGTTAGTGTTTGAACAGATAGGCAGCCGGAAGAACGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATGATGATCATCATCATGGTTATTTGGACTTGAATTTGCCTCCTCCAATGGAAGACATTGAAGAACGTTCATCATCCTATTGTTCAGGGATTGTTTTGGATCTGAGATTAGGGCCTAATTAA

mRNA sequence

ATGGATTCTCCTTCCCGTTCTCTGTTTCCCTTCACCGTTTTCCCCCATCCCTCTCCCTCCCATTCTTCCCTTCCGCCCCCCAATTCCCGCCGGAAGCGTACTAAGTTCATCAAACCCACCACCGCCGCCGCCCCTCTTCATTCTCCCTCCACTCCCAAGTCCAAGCACGCCAAGAAACCGGACCCTACCGCTCCCAAGATCACTCGCCCCTGTACTGAGTGCGGCAAGACGTTCTGGTCATGGAAGGCTCTGTTCGGCCATATGCGCTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATTTCCGCCGATCGACTGCCACTGACGAAGATCACGAAATCGCTGCCTGTTTGATTATGTTAGCGAATGGCCCTAATGCGATCGATCCAACTGAAGCGGTTACTGAAACGGATGGTGATTGTCGAGAAAATCAAGAATCGGCGGCGTTAGTGTTTGAACAGATAGGCAGCCGGAAGAACGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATGATGATCATCATCATGGTTATTTGGACTTGAATTTGCCTCCTCCAATGGAAGACATTGAAGAACGTTCATCATCCTATTGTTCAGGGATTGTTTTGGATCTGAGATTAGGGCCTAATTAA

Coding sequence (CDS)

ATGGATTCTCCTTCCCGTTCTCTGTTTCCCTTCACCGTTTTCCCCCATCCCTCTCCCTCCCATTCTTCCCTTCCGCCCCCCAATTCCCGCCGGAAGCGTACTAAGTTCATCAAACCCACCACCGCCGCCGCCCCTCTTCATTCTCCCTCCACTCCCAAGTCCAAGCACGCCAAGAAACCGGACCCTACCGCTCCCAAGATCACTCGCCCCTGTACTGAGTGCGGCAAGACGTTCTGGTCATGGAAGGCTCTGTTCGGCCATATGCGCTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCGCCGCCGAATTTCCGCCGATCGACTGCCACTGACGAAGATCACGAAATCGCTGCCTGTTTGATTATGTTAGCGAATGGCCCTAATGCGATCGATCCAACTGAAGCGGTTACTGAAACGGATGGTGATTGTCGAGAAAATCAAGAATCGGCGGCGTTAGTGTTTGAACAGATAGGCAGCCGGAAGAACGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATGATGATCATCATCATGGTTATTTGGACTTGAATTTGCCTCCTCCAATGGAAGACATTGAAGAACGTTCATCATCCTATTGTTCAGGGATTGTTTTGGATCTGAGATTAGGGCCTAATTAA

Protein sequence

MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAACLIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDDDDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN

Homology

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BLAST of Carg16136 vs. NCBI nr
Match: KAG7010815.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448.7 bits (1153), Expect = 2.8e-122
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60
           MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP
Sbjct: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60

Query: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120
           DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC
Sbjct: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120

Query: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD 180
           LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD
Sbjct: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD 180

Query: 181 DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
           DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN
Sbjct: 181 DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 219

[Close]

BLAST of Carg16136 vs. NCBI nr
Match: KAG6570978.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.2e-118
Identity = 214/219 (97.72%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60
           MDSPS SLFPFTVFP PSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP
Sbjct: 1   MDSPSHSLFPFTVFPPPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60

Query: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120
           DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC
Sbjct: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120

Query: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD 180
           LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEE+DDD
Sbjct: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEDDDD 180

Query: 181 DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
           DD  HGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN
Sbjct: 181 DDDDHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 219

[Close]

BLAST of Carg16136 vs. NCBI nr
Match: XP_022986192.1 (zinc finger protein ZAT3-like [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 1.7e-103
Identity = 199/225 (88.44%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAA-PLHSPSTPKSKHAKK 60
           MDSPSRSLFPF VFP PSPSHSSLP PNSRRKRTKFIKPT AAA PLHSPSTPKSKHAKK
Sbjct: 25  MDSPSRSLFPFNVFPPPSPSHSSLPAPNSRRKRTKFIKPTAAAAVPLHSPSTPKSKHAKK 84

Query: 61  PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA 120
           PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA
Sbjct: 85  PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA 144

Query: 121 CLIMLANGPNAIDPTEAVTETDGDCRENQES-----AALVFEQIGSRKNVKEEEEEEEEE 180
           CLIMLANGPNAIDPTEAVTETD DCRENQES     AALVF Q GSRKNVKEEE      
Sbjct: 145 CLIMLANGPNAIDPTEAVTETDDDCRENQESTAAAAAALVFGQRGSRKNVKEEE------ 204

Query: 181 EEEDDDDDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
               DDDD  HGYLDLNLPPPMEDIEE SSSYCSGIVLDLRLGPN
Sbjct: 205 ----DDDD--HGYLDLNLPPPMEDIEEHSSSYCSGIVLDLRLGPN 237

[Close]

BLAST of Carg16136 vs. NCBI nr
Match: XP_022944064.1 (zinc finger protein ZAT3-like [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 191/219 (87.21%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60
           MDSPS SLFPFTVFP PSPSHSSLPPPNSRRKRTKFIKPT  AAPLHSPSTPKSKHAKKP
Sbjct: 22  MDSPSHSLFPFTVFPPPSPSHSSLPPPNSRRKRTKFIKPT--AAPLHSPSTPKSKHAKKP 81

Query: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120
           DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC
Sbjct: 82  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 141

Query: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD 180
           LIMLANGPNAIDPTEAVTETDGDCRENQE  ALVFEQI                    DD
Sbjct: 142 LIMLANGPNAIDPTEAVTETDGDCRENQELTALVFEQI--------------------DD 201

Query: 181 DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
           DD  HGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN
Sbjct: 202 DDDDHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 218

[Close]

BLAST of Carg16136 vs. NCBI nr
Match: XP_023512246.1 (zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101
Identity = 196/224 (87.50%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAA--PLHSPSTPKSKHAK 60
           MDSPSRSLFPFTVFP PSPSHSSLP PNSRRKRTKFI+PTTAAA  PLHSPSTPKSKHAK
Sbjct: 22  MDSPSRSLFPFTVFPPPSPSHSSLPAPNSRRKRTKFIRPTTAAAAPPLHSPSTPKSKHAK 81

Query: 61  KPDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIA 120
           KPDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIA
Sbjct: 82  KPDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIA 141

Query: 121 ACLIMLANGPNAIDPTEAVTETDGDCRENQES--AALVFEQIGSRKNVKEEEEEEEEEEE 180
           ACLIMLANGPNAIDPTEAVTETDGDCRENQES  AALVF Q G +            EEE
Sbjct: 142 ACLIMLANGPNAIDPTEAVTETDGDCRENQESAAAALVFGQRGVK------------EEE 201

Query: 181 EDDDDDHHHGYLDLNLPPPMEDIEER-SSSYCSGIVLDLRLGPN 220
           EDDDDD   GYLDLNLPPPMEDIEE  SSSYCSGIVLDLRLGPN
Sbjct: 202 EDDDDDDDDGYLDLNLPPPMEDIEEHSSSSYCSGIVLDLRLGPN 233

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BLAST of Carg16136 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.8e-32
Identity = 103/274 (37.59%), Postives = 133/274 (48.54%), Query Frame = 0


Query: 19  PSHSSLPPPN------------SRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPDPTAPK 78
           PS++S P PN             ++KRTK +  +++++P    S  K K+ KKPDP APK
Sbjct: 18  PSNTSNPNPNLQFALSSSYDHSPKKKRTKTVASSSSSSP---KSASKPKYTKKPDPNAPK 77

Query: 79  ITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTA---------------- 138
           ITRPCTECG+ FWSWKALFGHMRCHPERQWRGINPPPN+R  TA                
Sbjct: 78  ITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSF 137

Query: 139 -TDEDHEIAACLIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVK---- 198
            ++EDHE+A+CL+ML+NG  +    E      G C++   S   +     S KNVK    
Sbjct: 138 MSEEDHEVASCLLMLSNGTPSSSSIERF--ECGGCKKVFGSHQALGGHRASHKNVKGCFA 197

Query: 199 -EEEEEEEEEEEEDDDDDH---------HH------------------------------ 218
                ++          DH         HH                              
Sbjct: 198 ITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPM 257

[Close]

BLAST of Carg16136 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.7e-26
Identity = 76/178 (42.70%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 2   DSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPD 61
           +S   S  PF       PS++     N RRKRTK       +    S S+P+ K   +PD
Sbjct: 6   NSDPNSDIPFASSNVTLPSYNQ----NPRRKRTKLTNNEVGS----SSSSPRPKPVTQPD 65

Query: 62  PTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRS------------T 121
           P A +I RPCTECGK F S KALFGHMRCHPERQWRGINPP NF+R              
Sbjct: 66  PDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASSSSSWD 125

Query: 122 ATDEDHEIAACLIMLANG--PNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVK 166
            ++E+H IA+CL+M+ANG  P      E   E DG C++   S   +     + K+VK
Sbjct: 126 PSEEEHNIASCLLMMANGDVPTRSSEVEERFECDG-CKKVFGSHQALGGHRATHKDVK 174

[Close]

BLAST of Carg16136 vs. ExPASy TrEMBL
Match: A0A6J1J6W8 (zinc finger protein ZAT3-like OS=Cucurbita maxima OX=3661 GN=LOC111484009 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.3e-104
Identity = 199/225 (88.44%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAA-PLHSPSTPKSKHAKK 60
           MDSPSRSLFPF VFP PSPSHSSLP PNSRRKRTKFIKPT AAA PLHSPSTPKSKHAKK
Sbjct: 25  MDSPSRSLFPFNVFPPPSPSHSSLPAPNSRRKRTKFIKPTAAAAVPLHSPSTPKSKHAKK 84

Query: 61  PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA 120
           PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA
Sbjct: 85  PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAA 144

Query: 121 CLIMLANGPNAIDPTEAVTETDGDCRENQES-----AALVFEQIGSRKNVKEEEEEEEEE 180
           CLIMLANGPNAIDPTEAVTETD DCRENQES     AALVF Q GSRKNVKEEE      
Sbjct: 145 CLIMLANGPNAIDPTEAVTETDDDCRENQESTAAAAAALVFGQRGSRKNVKEEE------ 204

Query: 181 EEEDDDDDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
               DDDD  HGYLDLNLPPPMEDIEE SSSYCSGIVLDLRLGPN
Sbjct: 205 ----DDDD--HGYLDLNLPPPMEDIEEHSSSYCSGIVLDLRLGPN 237

[Close]

BLAST of Carg16136 vs. ExPASy TrEMBL
Match: A0A6J1FVY9 (zinc finger protein ZAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111448614 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.0e-103
Identity = 191/219 (87.21%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKP 60
           MDSPS SLFPFTVFP PSPSHSSLPPPNSRRKRTKFIKPT  AAPLHSPSTPKSKHAKKP
Sbjct: 22  MDSPSHSLFPFTVFPPPSPSHSSLPPPNSRRKRTKFIKPT--AAPLHSPSTPKSKHAKKP 81

Query: 61  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 120
           DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC
Sbjct: 82  DPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTATDEDHEIAAC 141

Query: 121 LIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVKEEEEEEEEEEEEDDD 180
           LIMLANGPNAIDPTEAVTETDGDCRENQE  ALVFEQI                    DD
Sbjct: 142 LIMLANGPNAIDPTEAVTETDGDCRENQELTALVFEQI--------------------DD 201

Query: 181 DDHHHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 220
           DD  HGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN
Sbjct: 202 DDDDHGYLDLNLPPPMEDIEERSSSYCSGIVLDLRLGPN 218

[Close]

BLAST of Carg16136 vs. ExPASy TrEMBL
Match: A0A6J1CFB7 (zinc finger protein ZAT3 OS=Momordica charantia OX=3673 GN=LOC111011168 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51
Identity = 145/289 (50.17%), Postives = 163/289 (56.40%), Query Frame = 0


Query: 1   MDSPSRSLFPFTVFPHPS-------PSHSSLPPPNSRRKRTKFIKPTT-AAAPLHSPSTP 60
           MD+ S SLF F VF   S        S S++   N RRKRTK IK +    AP  S    
Sbjct: 1   MDTDSDSLFHFNVFRPASAFVAAAAASTSAVAAQNCRRKRTKLIKMSDHVLAPSSSGGIA 60

Query: 61  KSKHAKKPDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRS---- 120
           K K+ KKPDP+APKITRPC+ECGK FWSWKALFGHMRCHPERQWRGINPPPN RRS    
Sbjct: 61  KPKYGKKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRRSSETA 120

Query: 121 TATDEDHEIAACLIMLANGPNAID-PTEAVTETDGDCRENQESAALVFEQIG-------- 180
           TAT+EDHEIAACLIMLANGPNAID  TEAVTETD +     ++ +   E+ G        
Sbjct: 121 TATEEDHEIAACLIMLANGPNAIDRTTEAVTETDQESEPAVDALSRFMERTGPPFSRFEC 180

Query: 181 ------------------SRKNVK-----------------EEEEEE------------- 218
                             S KNVK                 EE  E              
Sbjct: 181 SRCKKSFGSHQALGGHRASHKNVKGCFAGGRTDGGEFSDAVEENGETANECRVCMKVMKR 240

[Close]

BLAST of Carg16136 vs. ExPASy TrEMBL
Match: A0A5Q2WVU3 (Zinc finger transcription factor OS=Diospyros kaki OX=35925 GN=ZF1 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 80/133 (60.15%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 25  PPPNSRRKRTKFIK----PTTAAAPLHSPS--TPKSKHAKKPDPTAPKITRPCTECGKTF 84
           P    R+KRTK ++    P+  A+   S      KSK  KKPDP APKITRPC+ECGKTF
Sbjct: 45  PHQKPRKKRTKLMRIENPPSIGASSSSSADGVAAKSKSGKKPDPDAPKITRPCSECGKTF 104

Query: 85  WSWKALFGHMRCHPERQWRGINPPPNFRRST---------ATDEDHEIAACLIMLANGPN 142
           WSWKALFGHMRCHPERQWRGINPPPNFRR +          TDEDH++AACL+MLAN P 
Sbjct: 105 WSWKALFGHMRCHPERQWRGINPPPNFRRPSPTANAEAGMTTDEDHDVAACLLMLANAPR 164

[Close]

BLAST of Carg16136 vs. ExPASy TrEMBL
Match: A0A7J7H281 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.3e-34
Identity = 81/146 (55.48%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 4   PSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPDPT 63
           P   +FP      PS   ++    N R+KRTK I     ++     +T K K  KKPDP+
Sbjct: 18  PDHQIFP----RFPSLGVATANHQNPRKKRTKLIPIGVTSSSGGGVATAKPKCGKKPDPS 77

Query: 64  APKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTA---------TDED 123
           APKITRPC+ECGK FWSWKALFGHMRCHPERQWRGINPPPNFRR T+         T ED
Sbjct: 78  APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPTSPEISGDARMTPED 137

Query: 124 HEIAACLIMLANGPNAIDPTEAVTET 141
           HE+AACL+MLAN P A +   A T T
Sbjct: 138 HEVAACLLMLANSPTAFETQCAATTT 159

[Close]

BLAST of Carg16136 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.4e-33
Identity = 103/274 (37.59%), Postives = 133/274 (48.54%), Query Frame = 0


Query: 19  PSHSSLPPPN------------SRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPDPTAPK 78
           PS++S P PN             ++KRTK +  +++++P    S  K K+ KKPDP APK
Sbjct: 18  PSNTSNPNPNLQFALSSSYDHSPKKKRTKTVASSSSSSP---KSASKPKYTKKPDPNAPK 77

Query: 79  ITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTA---------------- 138
           ITRPCTECG+ FWSWKALFGHMRCHPERQWRGINPPPN+R  TA                
Sbjct: 78  ITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSF 137

Query: 139 -TDEDHEIAACLIMLANGPNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVK---- 198
            ++EDHE+A+CL+ML+NG  +    E      G C++   S   +     S KNVK    
Sbjct: 138 MSEEDHEVASCLLMLSNGTPSSSSIERF--ECGGCKKVFGSHQALGGHRASHKNVKGCFA 197

Query: 199 -EEEEEEEEEEEEDDDDDH---------HH------------------------------ 218
                ++          DH         HH                              
Sbjct: 198 ITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPM 257

[Close]

BLAST of Carg16136 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 118.6 bits (296), Expect = 6.2e-27
Identity = 76/178 (42.70%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 2   DSPSRSLFPFTVFPHPSPSHSSLPPPNSRRKRTKFIKPTTAAAPLHSPSTPKSKHAKKPD 61
           +S   S  PF       PS++     N RRKRTK       +    S S+P+ K   +PD
Sbjct: 6   NSDPNSDIPFASSNVTLPSYNQ----NPRRKRTKLTNNEVGS----SSSSPRPKPVTQPD 65

Query: 62  PTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRS------------T 121
           P A +I RPCTECGK F S KALFGHMRCHPERQWRGINPP NF+R              
Sbjct: 66  PDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASSSSSWD 125

Query: 122 ATDEDHEIAACLIMLANG--PNAIDPTEAVTETDGDCRENQESAALVFEQIGSRKNVK 166
            ++E+H IA+CL+M+ANG  P      E   E DG C++   S   +     + K+VK
Sbjct: 126 PSEEEHNIASCLLMMANGDVPTRSSEVEERFECDG-CKKVFGSHQALGGHRATHKDVK 174

[Close]

BLAST of Carg16136 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0


Query: 71  CTECGKTFWSWKALFGHMRCHPERQWRGINPPP 104
           C  CGK F +  +LFGHMR HP+R W+GI PPP
Sbjct: 121 CCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPP 153

[Close]

BLAST of Carg16136 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 46/152 (30.26%), Postives = 64/152 (42.11%), Query Frame = 0


Query: 57  AKKPDPTAPKITRP------CTECGKTFWSWKALFGHMRCHPERQWRGINPPPNFRRSTA 116
           AKKP   A ++T P      C  CG+ F SWKA+FGHMR H +R ++G  PPP F     
Sbjct: 120 AKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFGHMRAHRDRNYQGFLPPPTFSAGAE 179

Query: 117 TDEDHEIAACLIMLANGPNAIDPTEAVTETDGDCRENQESAALVFE-QIGSRKNVKEEEE 176
                 + +   +   G  +         + GD   +    A   E   GS  ++  E  
Sbjct: 180 RFVIPGLRSAFTIATVGGGSSGGVAVGGRSSGDFSGSGGGDAPGSEGGRGSGIDLNVEPV 239

Query: 177 EEEEEEEEDDDDDHHHGYLDLNLPPPMEDIEE 202
           E+ EE  E           DLN  PP ++ EE
Sbjct: 240 EQVEEATESG----CIAKFDLNKSPPKDEEEE 267

The following BLAST results are available for this feature:

BLAST of Carg16136 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010815.1	2.8e-122	100.00	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570978.1	4.2e-118	97.72	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022986192.1	1.7e-103	88.44	zinc finger protein ZAT3-like [Cucurbita maxima]	[more]
XP_022944064.1	1.4e-102	87.21	zinc finger protein ZAT3-like [Cucurbita moschata]	[more]
XP_023512246.1	2.1e-101	87.50	zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16136 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	4.8e-32	37.59	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	8.7e-26	42.70	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]

BLAST of Carg16136 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6W8	8.3e-104	88.44	zinc finger protein ZAT3-like OS=Cucurbita maxima OX=3661 GN=LOC111484009 PE=4 S...	[more]
A0A6J1FVY9	7.0e-103	87.21	zinc finger protein ZAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111448614 PE=4...	[more]
A0A6J1CFB7	2.1e-51	50.17	zinc finger protein ZAT3 OS=Momordica charantia OX=3673 GN=LOC111011168 PE=4 SV=...	[more]
A0A5Q2WVU3	1.4e-34	60.15	Zinc finger transcription factor OS=Diospyros kaki OX=35925 GN=ZF1 PE=2 SV=1	[more]
A0A7J7H281	5.3e-34	55.48	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1	[more]

BLAST of Carg16136 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35280.1	3.4e-33	37.59	C2H2-like zinc finger protein	[more]
AT2G17180.1	6.2e-27	42.70	C2H2-like zinc finger protein	[more]
AT2G26940.1	3.2e-07	60.61	C2H2-type zinc finger family protein	[more]
AT4G35610.1	1.3e-05	30.26	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..181
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 70..93 e-value: 4.4E-8 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 23..176
None	No IPR available	PANTHER	PTHR47591:SF1	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 23..176
None	No IPR available	PANTHER	PTHR47591:SF1	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 167..217
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 167..217
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 71..91
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 69..96 score: 9.805782
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 70..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16136-RA	Carg16136-RA	mRNA