Carg16134 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16134
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEC metallothionein-like protein
LocationCarg_Chr20: 3445213 .. 3445476 (+)
RNA-Seq ExpressionCarg16134
SyntenyCarg16134
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA

mRNA sequence

ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA

Coding sequence (CDS)

ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA

Protein sequence

MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTCPSAVVGVGKGSCRCGEDCRCEICRCAD
Homology
BLAST of Carg16134 vs. NCBI nr
Match: XP_022944284.1 (metallothionein-like protein 4A [Cucurbita moschata] >KAG6570975.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010813.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60
          MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC
Sbjct: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60

Query: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 88
          PSAVVGVGKGSCRCGEDCRCEICRCAD
Sbjct: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 87

BLAST of Carg16134 vs. NCBI nr
Match: XP_022985832.1 (metallothionein-like protein 4B [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60
          MAEPGGGERGGIRACNQ CGCAVPCPGGNACKCATATAGGEVAHR+CPCGEHCGCDPCTC
Sbjct: 1  MAEPGGGERGGIRACNQRCGCAVPCPGGNACKCATATAGGEVAHRKCPCGEHCGCDPCTC 60

Query: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 88
          PSAVVGVGKGSCRCGEDCRCEICRCAD
Sbjct: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 87

BLAST of Carg16134 vs. NCBI nr
Match: XP_023513130.1 (metallothionein-like protein 4A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 2.3e-43
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 1  MAEP-GGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCT 60
          MAEP GGG RGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCT
Sbjct: 1  MAEPGGGGVRGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCT 60

Query: 61 CPSAVVGVGKGSCRCGEDCRCEICRCAD 88
          CPSAVVGVG+G CRCGEDCRCEICRCAD
Sbjct: 61 CPSAVVGVGRGKCRCGEDCRCEICRCAD 88

BLAST of Carg16134 vs. NCBI nr
Match: XP_008448405.1 (PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothionein-like protein 4A [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 9.0e-32
Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MAEPGG-GERGGIRACNQSCGCAVPCPGGNACKCATAT-AGGEVAHR-QCPCGEHCGCDP 60
          MAEPGG   RGG+ ACNQSCGCAVPCPGGNAC+C+TAT AGGE A+  +CPCGEHC C+P
Sbjct: 1  MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATAAGGETAYNWRCPCGEHCDCNP 60

Query: 61 CTCPSAVVGVGKGSCRCGEDCRCEICRC 86
          CTCP   VGVGKG+CRCG+DCRCE+CRC
Sbjct: 61 CTCPRTEVGVGKGNCRCGQDCRCEVCRC 88

BLAST of Carg16134 vs. NCBI nr
Match: XP_022140669.1 (metallothionein-like protein 4A [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31
Identity = 68/87 (78.16%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 1  MAEPG-GGERGGIRACNQSCGCAVPCPGGNACKCATA---TAGGEVAHRQCPCGEHCGCD 60
          MAE G  G  GGIRACNQSCGCAVPCPGGNAC+CATA   TAGG+ AHR CPCGEHCGC+
Sbjct: 1  MAEAGRRGGGGGIRACNQSCGCAVPCPGGNACRCATAKVETAGGDAAHRWCPCGEHCGCN 60

Query: 61 PCTCPSAVVGVGKGSCRCGEDCRCEIC 84
          PCTCPSAV GVGK  C+CGE+CRCE C
Sbjct: 61 PCTCPSAVAGVGKDFCKCGENCRCETC 87

BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P93746 (Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17
Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATA-GGEVAHRQCPCGEHCGCDPCT 60
          MA+ G G    +  CN SCGC  PCPGGN+C+C    A  G+  H  CPCGEHCGC+PC 
Sbjct: 1  MADTGKG--SSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCN 60

Query: 61 CPSAVVGVGKGSCRCGEDCRCEIC 84
          CP          C CGE C C  C
Sbjct: 61 CPKTQTQTSAKGCTCGEGCTCASC 82

BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: Q42377 (Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-17
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKC--ATATAGGEVAHRQCPCGEHCGCDPC 60
          MA+ G G      +CN  CGC  PCPGG +C+C   +  +GG+  H  CPCGEHCGC+PC
Sbjct: 1  MADTGKGSASA--SCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPC 60

Query: 61 TCPSAVVGVGKGSCRCGEDCRCEIC 84
           CP          C CGE C C  C
Sbjct: 61 NCPKTQTQTSAKGCTCGEGCTCATC 83

BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P43401 (EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-15
Identity = 37/76 (48.68%), Postives = 45/76 (59.21%), Query Frame = 0

Query: 15 CNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTCPSAVVGVG----KG 74
          C+  CGCAVPCPGG  C+C T+ +GG+  H  C CGEHC C PCTC  A +  G    + 
Sbjct: 3  CDDKCGCAVPCPGGKDCRC-TSGSGGQREHTTCGCGEHCECSPCTCGRATMPSGRENRRA 62

Query: 75 SCRCGEDCRCEICRCA 87
          +C CG  C C  C  A
Sbjct: 63 NCSCGASCNCASCASA 77

BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: Q109B0 (Class II metallothionein-like protein 1A OS=Oryza sativa subsp. japonica OX=39947 GN=MT21A PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-14
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 0

Query: 15 CNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTCPSAVVGVG----KG 74
          C+  CGCAVPCPGG  C+CA++   G   H  C CG+HCGC+PC C       G    + 
Sbjct: 3  CDDKCGCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPCRCGRESQPTGRENRRA 62

Query: 75 SCRCGEDCRCEIC 84
           C CG+ C C  C
Sbjct: 63 GCSCGDSCTCASC 75

BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P30570 (EC protein III OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 0

Query: 15 CNQSCGCAVPCPGGNACKCATA---TAGGEVAHRQCPCGEHCGCDPCTCPSAVVGVG--- 74
          CN  CGCAVPCPGG  C+C +A    A GE  H  C CGEHCGC+PC C       G   
Sbjct: 3  CNDKCGCAVPCPGGTGCRCTSARSDAAAGE--HTTCGCGEHCGCNPCACGREGTPSGRAN 62

Query: 75 -KGSCRCGEDCRCEIC 84
           + +C CG  C C  C
Sbjct: 63 RRANCSCGAACNCASC 76

BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1FWF6 (metallothionein-like protein 4A OS=Cucurbita moschata OX=3662 GN=LOC111448775 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60
          MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC
Sbjct: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60

Query: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 88
          PSAVVGVGKGSCRCGEDCRCEICRCAD
Sbjct: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 87

BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1J5Z9 (metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTC 60
          MAEPGGGERGGIRACNQ CGCAVPCPGGNACKCATATAGGEVAHR+CPCGEHCGCDPCTC
Sbjct: 1  MAEPGGGERGGIRACNQRCGCAVPCPGGNACKCATATAGGEVAHRKCPCGEHCGCDPCTC 60

Query: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 88
          PSAVVGVGKGSCRCGEDCRCEICRCAD
Sbjct: 61 PSAVVGVGKGSCRCGEDCRCEICRCAD 87

BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A5D3CS48 (Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00240 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.4e-32
Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MAEPGG-GERGGIRACNQSCGCAVPCPGGNACKCATAT-AGGEVAHR-QCPCGEHCGCDP 60
          MAEPGG   RGG+ ACNQSCGCAVPCPGGNAC+C+TAT AGGE A+  +CPCGEHC C+P
Sbjct: 1  MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATAAGGETAYNWRCPCGEHCDCNP 60

Query: 61 CTCPSAVVGVGKGSCRCGEDCRCEICRC 86
          CTCP   VGVGKG+CRCG+DCRCE+CRC
Sbjct: 61 CTCPRTEVGVGKGNCRCGQDCRCEVCRC 88

BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A1S3BJL5 (metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.4e-32
Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MAEPGG-GERGGIRACNQSCGCAVPCPGGNACKCATAT-AGGEVAHR-QCPCGEHCGCDP 60
          MAEPGG   RGG+ ACNQSCGCAVPCPGGNAC+C+TAT AGGE A+  +CPCGEHC C+P
Sbjct: 1  MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATAAGGETAYNWRCPCGEHCDCNP 60

Query: 61 CTCPSAVVGVGKGSCRCGEDCRCEICRC 86
          CTCP   VGVGKG+CRCG+DCRCE+CRC
Sbjct: 61 CTCPRTEVGVGKGNCRCGQDCRCEVCRC 88

BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1CGB3 (metallothionein-like protein 4A OS=Momordica charantia OX=3673 GN=LOC111011270 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 68/87 (78.16%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 1  MAEPG-GGERGGIRACNQSCGCAVPCPGGNACKCATA---TAGGEVAHRQCPCGEHCGCD 60
          MAE G  G  GGIRACNQSCGCAVPCPGGNAC+CATA   TAGG+ AHR CPCGEHCGC+
Sbjct: 1  MAEAGRRGGGGGIRACNQSCGCAVPCPGGNACRCATAKVETAGGDAAHRWCPCGEHCGCN 60

Query: 61 PCTCPSAVVGVGKGSCRCGEDCRCEIC 84
          PCTCPSAV GVGK  C+CGE+CRCE C
Sbjct: 61 PCTCPSAVAGVGKDFCKCGENCRCETC 87

BLAST of Carg16134 vs. TAIR 10
Match: AT2G42000.1 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-19
Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 1   MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATA-GGEVAHRQCPCGEHCGCDPCT 60
           MA+ G G    +  CN SCGC  PCPGGN+C+C    A  G+  H  CPCGEHCGC+PC 
Sbjct: 32  MADTGKG--SSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCN 91

Query: 61  CPSAVVGVGKGSCRCGEDCRCEIC 84
           CP          C CGE C C  C
Sbjct: 92  CPKTQTQTSAKGCTCGEGCTCASC 113

BLAST of Carg16134 vs. TAIR 10
Match: AT2G42000.2 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-19
Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 1   MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATA-GGEVAHRQCPCGEHCGCDPCT 60
           MA+ G G    +  CN SCGC  PCPGGN+C+C    A  G+  H  CPCGEHCGC+PC 
Sbjct: 37  MADTGKG--SSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCN 96

Query: 61  CPSAVVGVGKGSCRCGEDCRCEIC 84
           CP          C CGE C C  C
Sbjct: 97  CPKTQTQTSAKGCTCGEGCTCASC 118

BLAST of Carg16134 vs. TAIR 10
Match: AT2G23240.1 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 88.2 bits (217), Expect = 3.6e-18
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKC--ATATAGGEVAHRQCPCGEHCGCDPC 60
          MA+ G G      +CN  CGC  PCPGG +C+C   +  +GG+  H  CPCGEHCGC+PC
Sbjct: 1  MADTGKGSASA--SCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPC 60

Query: 61 TCPSAVVGVGKGSCRCGEDCRCEIC 84
           CP          C CGE C C  C
Sbjct: 61 NCPKTQTQTSAKGCTCGEGCTCATC 83

BLAST of Carg16134 vs. TAIR 10
Match: AT2G23240.2 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-17
Identity = 39/84 (46.43%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 1  MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATA-GGEVAHRQCPCGEHCGCDPCT 60
          MA+ G G      +CN  CGC  PCPGG +C+   + A GG+  H  CPCGEHCGC+PC 
Sbjct: 1  MADTGKGSASA--SCNDRCGCPSPCPGGESCRLMMSEASGGDQEHNTCPCGEHCGCNPCN 60

Query: 61 CPSAVVGVGKGSCRCGEDCRCEIC 84
          CP          C CGE C C  C
Sbjct: 61 CPKTQTQTSAKGCTCGEGCTCATC 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022944284.12.2e-46100.00metallothionein-like protein 4A [Cucurbita moschata] >KAG6570975.1 Metallothione... [more]
XP_022985832.12.4e-4597.70metallothionein-like protein 4B [Cucurbita maxima][more]
XP_023513130.12.3e-4395.45metallothionein-like protein 4A [Cucurbita pepo subsp. pepo][more]
XP_008448405.19.0e-3276.14PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothi... [more]
XP_022140669.12.6e-3178.16metallothionein-like protein 4A [Momordica charantia][more]
Match NameE-valueIdentityDescription
P937461.0e-1748.81Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=... [more]
Q423775.0e-1745.88Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=... [more]
P434018.0e-1548.68EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2[more]
Q109B02.3e-1445.21Class II metallothionein-like protein 1A OS=Oryza sativa subsp. japonica OX=3994... [more]
P305701.5e-1348.68EC protein III OS=Triticum aestivum OX=4565 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1FWF61.1e-46100.00metallothionein-like protein 4A OS=Cucurbita moschata OX=3662 GN=LOC111448775 PE... [more]
A0A6J1J5Z91.2e-4597.70metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4... [more]
A0A5D3CS484.4e-3276.14Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3BJL54.4e-3276.14metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=... [more]
A0A6J1CGB31.3e-3178.16metallothionein-like protein 4A OS=Momordica charantia OX=3673 GN=LOC111011270 P... [more]
Match NameE-valueIdentityDescription
AT2G42000.17.2e-1948.81Plant EC metallothionein-like protein, family 15 [more]
AT2G42000.27.2e-1948.81Plant EC metallothionein-like protein, family 15 [more]
AT2G23240.13.6e-1845.88Plant EC metallothionein-like protein, family 15 [more]
AT2G23240.22.3e-1746.43Plant EC metallothionein-like protein, family 15 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000316Plant EC metallothionein-like protein, family 15PRINTSPR00877MTPLANTPECcoord: 29..36
score: 34.38
coord: 55..62
score: 56.25
coord: 22..28
score: 92.86
coord: 14..22
score: 61.11
IPR000316Plant EC metallothionein-like protein, family 15PFAMPF02068Metallothio_PECcoord: 15..83
e-value: 3.3E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR48198EC PROTEIN HOMOLOGcoord: 11..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16134-RACarg16134-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding