Carg16134 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA ATGGCAGAACCTGGTGGCGGCGAACGCGGTGGAATCAGAGCTTGCAACCAGAGCTGTGGTTGCGCCGTTCCCTGTCCCGGTGGCAACGCTTGTAAGTGTGCAACGGCGACGGCGGGGGGAGAGGTGGCGCATCGGCAGTGCCCGTGCGGGGAGCACTGTGGGTGCGACCCCTGTACTTGTCCGAGTGCGGTGGTGGGAGTGGGAAAGGGTAGCTGCAGGTGCGGGGAGGACTGCCGGTGTGAAATTTGCCGATGTGCAGATTGA MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATATAGGEVAHRQCPCGEHCGCDPCTCPSAVVGVGKGSCRCGEDCRCEICRCAD Homology
BLAST of Carg16134 vs. NCBI nr
Match: XP_022944284.1 (metallothionein-like protein 4A [Cucurbita moschata] >KAG6570975.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010813.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Carg16134 vs. NCBI nr
Match: XP_022985832.1 (metallothionein-like protein 4B [Cucurbita maxima]) HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Carg16134 vs. NCBI nr
Match: XP_023513130.1 (metallothionein-like protein 4A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.3 bits (469), Expect = 2.3e-43 Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Carg16134 vs. NCBI nr
Match: XP_008448405.1 (PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothionein-like protein 4A [Cucumis melo var. makuwa]) HSP 1 Score: 146.7 bits (369), Expect = 9.0e-32 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Carg16134 vs. NCBI nr
Match: XP_022140669.1 (metallothionein-like protein 4A [Momordica charantia]) HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31 Identity = 68/87 (78.16%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P93746 (Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17 Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: Q42377 (Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 5.0e-17 Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P43401 (EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 8.0e-15 Identity = 37/76 (48.68%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: Q109B0 (Class II metallothionein-like protein 1A OS=Oryza sativa subsp. japonica OX=39947 GN=MT21A PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.3e-14 Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy Swiss-Prot
Match: P30570 (EC protein III OS=Triticum aestivum OX=4565 PE=2 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13 Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1FWF6 (metallothionein-like protein 4A OS=Cucurbita moschata OX=3662 GN=LOC111448775 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1J5Z9 (metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A5D3CS48 (Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00240 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.4e-32 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A1S3BJL5 (metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.4e-32 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Carg16134 vs. ExPASy TrEMBL
Match: A0A6J1CGB3 (metallothionein-like protein 4A OS=Momordica charantia OX=3673 GN=LOC111011270 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 68/87 (78.16%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Carg16134 vs. TAIR 10
Match: AT2G42000.1 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-19 Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Carg16134 vs. TAIR 10
Match: AT2G42000.2 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-19 Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Carg16134 vs. TAIR 10
Match: AT2G23240.1 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 88.2 bits (217), Expect = 3.6e-18 Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Carg16134 vs. TAIR 10
Match: AT2G23240.2 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 85.5 bits (210), Expect = 2.3e-17 Identity = 39/84 (46.43%), Postives = 46/84 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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