Carg16129 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16129
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr20: 3425910 .. 3427796 (-)
RNA-Seq ExpressionCarg16129
SyntenyCarg16129
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCAATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGGGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCAGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACGGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGATTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGTATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTCGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTGTATGCTCTTGTGGTGATTACTGGTGA

mRNA sequence

ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCAATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGGGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCAGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACGGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGATTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGTATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTCGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTGTATGCTCTTGTGGTGATTACTGGTGA

Coding sequence (CDS)

ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCAATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGGGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCAGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACGGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGATTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGTATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTCGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTGTATGCTCTTGTGGTGATTACTGGTGA

Protein sequence

MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW
Homology
[Close]
BLAST of Carg16129 vs. NCBI nr
Match: KAG6570970.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010808.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1276.5 bits (3302), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]
BLAST of Carg16129 vs. NCBI nr
Match: XP_023512954.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 625/628 (99.52%), Postives = 626/628 (99.68%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SL KVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLTKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE+MKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFEAMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]
BLAST of Carg16129 vs. NCBI nr
Match: XP_022986985.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 623/628 (99.20%), Postives = 624/628 (99.36%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGG+EQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP
Sbjct: 61  YSELIKCCLVRGGIEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLR CNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRDCNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSK GEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKFGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]
BLAST of Carg16129 vs. NCBI nr
Match: XP_022943463.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 625/628 (99.52%), Postives = 626/628 (99.68%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 628

[Close]
BLAST of Carg16129 vs. NCBI nr
Match: XP_038876633.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876634.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876635.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876636.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876637.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876638.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876639.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876640.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/629 (90.78%), Postives = 598/629 (95.07%), Query Frame = 0 

Query: 1   MRRATSMLKLAPP-WLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAI 60
           MRRAT +LKL PP WL RF SVSA SLVDEFTKFCYQRDLPRAMK MEAMQRN L+ADAI
Sbjct: 1   MRRATLLLKLTPPIWLFRFCSVSAYSLVDEFTKFCYQRDLPRAMKTMEAMQRNCLYADAI 60

Query: 61  TYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEM 120
           TYSELIKCCL+RG VEQGRLVHEHVFSNGYE KTFLINTLLNMYVKFGLLDEAQ LFDEM
Sbjct: 61  TYSELIKCCLLRGAVEQGRLVHEHVFSNGYEAKTFLINTLLNMYVKFGLLDEAQNLFDEM 120

Query: 121 PDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLH 180
            DRNVVSWTTMISAYS+S+LNH ALEFLILM REGVRPNMFTYSSVLRAC+GLLNLRQLH
Sbjct: 121 LDRNVVSWTTMISAYSSSNLNHKALEFLILMFREGVRPNMFTYSSVLRACDGLLNLRQLH 180

Query: 181 GSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGD 240
           GS+MKVGLESD+FVRSALID YSK+GEQ+DALNVFNEMVT DLVVWNSIIGG AQNSDGD
Sbjct: 181 GSIMKVGLESDIFVRSALIDAYSKMGEQRDALNVFNEMVTSDLVVWNSIIGGFAQNSDGD 240

Query: 241 EALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDM 300
           EAL LYKRMKRAGFA DQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDM
Sbjct: 241 EALRLYKRMKRAGFAVDQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDM 300

Query: 301 YCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYIT 360
           YCKCGSLEDANLVFTR M +KDVISWSTMIAGLAQNGFSTDALKLFESMK +GPKPNYIT
Sbjct: 301 YCKCGSLEDANLVFTRRMTEKDVISWSTMIAGLAQNGFSTDALKLFESMKSKGPKPNYIT 360

Query: 361 VLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 420
           VLGVLFACSHAGLV DGWYYF+SMKELFGIDPGREHYGC+IDLLGRAGKLDEAVKLIHEM
Sbjct: 361 VLGVLFACSHAGLVNDGWYYFKSMKELFGIDPGREHYGCMIDLLGRAGKLDEAVKLIHEM 420

Query: 421 KHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVA 480
            HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILLSNIYAN+QKWEDV 
Sbjct: 421 NHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPFDAGTYILLSNIYANSQKWEDVT 480

Query: 481 EVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVP 540
           EVR  MRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRI++IKRE+S++IQRL+ VGYVP
Sbjct: 481 EVRSRMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIKEIKRELSQLIQRLMRVGYVP 540

Query: 541 DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVA 600
           DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLV+
Sbjct: 541 DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVS 600

Query: 601 QLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           QLENRVIVIRDPIRYHHF++GVCSCGDYW
Sbjct: 601 QLENRVIVIRDPIRYHHFRDGVCSCGDYW 629

[Close]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 929.5 bits (2401), Expect = 2.0e-269
Identity = 433/631 (68.62%), Postives = 534/631 (84.63%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLV---RFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWAD 60
           M+   S +KL  P +     +SS   + L+ EFT+ CYQRDLPRAMKAM+++Q + LWAD
Sbjct: 1   MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60

Query: 61  AITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFD 120
           + TYSELIKCC+    V +G L+  H++ NG+ P  FL+N L+NMYVKF LL++A +LFD
Sbjct: 61  SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120

Query: 121 EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQ 180
           +MP RNV+SWTTMISAYS   ++  ALE L+LMLR+ VRPN++TYSSVLR+CNG+ ++R 
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180

Query: 181 LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSD 240
           LH  ++K GLESDVFVRSALID ++KLGE +DAL+VF+EMVTGD +VWNSIIGG AQNS 
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240

Query: 241 GDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 300
            D AL L+KRMKRAGF A+Q+TLTSVLRACTGLALLELG Q HVH++K+DQDLILNNAL+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300

Query: 301 DMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNY 360
           DMYCKCGSLEDA  VF + M ++DVI+WSTMI+GLAQNG+S +ALKLFE MK  G KPNY
Sbjct: 301 DMYCKCGSLEDALRVFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 360

Query: 361 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 420
           IT++GVLFACSHAGL++DGWYYF+SMK+L+GIDP REHYGC+IDLLG+AGKLD+AVKL++
Sbjct: 361 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 420

Query: 421 EMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWED 480
           EM+ EPDAVTWR LLGACRV +N+ LA YAAK+++ LDP DAGTY LLSNIYAN+QKW+ 
Sbjct: 421 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 480

Query: 481 VAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGY 540
           V E+R  MR RG+KKEPGCSWIEV+KQ+HAFI+GDNSHP+I ++ ++++++I RL  +GY
Sbjct: 481 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 540

Query: 541 VPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKL 600
           VP+TNFVLQDLEGEQMEDSL++HSEKLA+ FGLM+LP EK IRIRKNLRICGDCH+F KL
Sbjct: 541 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 600

Query: 601 VAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            ++LE R IVIRDPIRYHHFQ+G CSCGDYW
Sbjct: 601 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 1.8e-148
Identity = 257/582 (44.16%), Postives = 374/582 (64.26%), Query Frame = 0 

Query: 56  ADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKL 115
           AD   Y+ L+K C V   + QGR+VH H+  + +     + NTLLNMY K G L+EA+K+
Sbjct: 58  ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 116 FDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRA------- 175
           F++MP R+ V+WTT+IS YS       AL F   MLR G  PN FT SSV++A       
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 176 CNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSI 235
           C G     QLHG  +K G +S+V V SAL+D Y++ G   DA  VF+ + + + V WN++
Sbjct: 178 CCG----HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 237

Query: 236 IGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQ 295
           I G A+ S  ++AL L++ M R GF     +  S+  AC+    LE G+ VH +++K  +
Sbjct: 238 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 297

Query: 296 DLI--LNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE 355
            L+    N LLDMY K GS+ DA  +F R +A +DV+SW++++   AQ+GF  +A+  FE
Sbjct: 298 KLVAFAGNTLLDMYAKSGSIHDARKIFDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 357

Query: 356 SMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRA 415
            M+  G +PN I+ L VL ACSH+GL+ +GW+Y++ MK+  GI P   HY  ++DLLGRA
Sbjct: 358 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 417

Query: 416 GKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLS 475
           G L+ A++ I EM  EP A  W+ LL ACR+HKN +L  YAA+ + +LDP D G +++L 
Sbjct: 418 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 477

Query: 476 NIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREIS 535
           NIYA+  +W D A VR+ M+  GVKKEP CSW+E+   +H F+  D  HP+ E+I R+  
Sbjct: 478 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 537

Query: 536 RVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLR 595
            V+ ++  +GYVPDT+ V+  ++ ++ E +LQYHSEK+A+ F L++ P   TI I+KN+R
Sbjct: 538 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 597

Query: 596 ICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           +CGDCH   KL +++  R I++RD  R+HHF++G CSC DYW
Sbjct: 598 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

[Close]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.3e-135
Identity = 236/587 (40.20%), Postives = 375/587 (63.88%), Query Frame = 0 

Query: 49  MQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGL 108
           MQ  R+  D+ T+  L+K C     ++ GR VH  VF  G++   F+ N L+ +Y K   
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169

Query: 109 LDEAQKLFD--EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVL 168
           L  A+ +F+   +P+R +VSWT ++SAY+ +     ALE    M +  V+P+     SVL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229

Query: 169 RACNGLLNLRQ---LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLV 228
            A   L +L+Q   +H S++K+GLE +  +  +L   Y+K G+   A  +F++M + +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289

Query: 229 VWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHV 288
           +WN++I G A+N    EA+ ++  M       D  ++TS + AC  +  LE  R ++ +V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 289 LKFD--QDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDA 348
            + D   D+ +++AL+DM+ KCGS+E A LVF RT+ D+DV+ WS MI G   +G + +A
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGRAREA 409

Query: 349 LKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIID 408
           + L+ +M+  G  PN +T LG+L AC+H+G+V++GW++F  M +   I+P ++HY C+ID
Sbjct: 410 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 469

Query: 409 LLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGT 468
           LLGRAG LD+A ++I  M  +P    W  LL AC+ H++V+L  YAA+++  +DP++ G 
Sbjct: 470 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 529

Query: 469 YILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDI 528
           Y+ LSN+YA  + W+ VAEVR  M+ +G+ K+ GCSW+EV  ++ AF +GD SHPR E+I
Sbjct: 530 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 589

Query: 529 KREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRI 588
           +R++  +  RL   G+V + +  L DL  E+ E++L  HSE++AI +GL+S P+   +RI
Sbjct: 590 ERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRI 649

Query: 589 RKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            KNLR C +CH   KL+++L +R IV+RD  R+HHF++GVCSCGDYW
Sbjct: 650 TKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 484.2 bits (1245), Expect = 2.3e-135
Identity = 229/596 (38.42%), Postives = 359/596 (60.23%), Query Frame = 0 

Query: 38   DLPRAMKAMEAMQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
            DL  + +    MQ   +  +  TY  ++K C+  G +E G  +H  +    ++   ++ +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 98   TLLNMYVKFGLLDEAQKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRP 157
             L++MY K G LD A  +      ++VVSWTTMI+ Y+  + +  AL     ML  G+R 
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 158  NMFTYSSVLRACNGLLNLR---QLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVF 217
            +    ++ + AC GL  L+   Q+H      G  SD+  ++AL+  YS+ G+ +++   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 218  NEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLE 277
             +   GD + WN+++ G  Q+ + +EAL ++ RM R G   +  T  S ++A +  A ++
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 278  LGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGL 337
             G+QVH  + K  +D +  + NAL+ MY KCGS+ DA   F   ++ K+ +SW+ +I   
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE-VSTKNEVSWNAIINAY 769

Query: 338  AQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPG 397
            +++GF ++AL  F+ M     +PN++T++GVL ACSH GLV  G  YF+SM   +G+ P 
Sbjct: 770  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 829

Query: 398  REHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 457
             EHY C++D+L RAG L  A + I EM  +PDA+ WR LL AC VHKN+++  +AA  +L
Sbjct: 830  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 889

Query: 458  KLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGD 517
            +L+P D+ TY+LLSN+YA ++KW+     R+ M+ +GVKKEPG SWIEV   +H+F +GD
Sbjct: 890  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 949

Query: 518  NSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMS 577
             +HP  ++I      + +R   +GYV D   +L +L+ EQ +  +  HSEKLAI FGL+S
Sbjct: 950  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1009

Query: 578  LPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            LP    I + KNLR+C DCH + K V+++ NR I++RD  R+HHF+ G CSC DYW
Sbjct: 1010 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 7.5e-131
Identity = 243/607 (40.03%), Postives = 378/607 (62.27%), Query Frame = 0 

Query: 38  DLPRAMKAMEAMQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
           D   A+ A  +M++  L+    ++   IK C     +  G+  H+  F  GY+   F+ +
Sbjct: 56  DSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSS 115

Query: 98  TLLNMYVKFGLLDEAQKLFDEMPDRNVVSWTTMISAY--SNSSLNHMALEFLILMLREGV 157
            L+ MY   G L++A+K+FDE+P RN+VSWT+MI  Y  + ++L+ ++L   +L+     
Sbjct: 116 ALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175

Query: 158 RPNMFTYS----SVLRACN-----GLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGE 217
              MF  S    SV+ AC+     GL     +H  ++K G +  V V + L+D Y+K GE
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGL--TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 235

Query: 218 QQDAL--NVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRM-KRAGFAADQSTLTSV 277
              A+   +F+++V  D V +NSI+   AQ+   +EA  +++R+ K      +  TL++V
Sbjct: 236 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 295

Query: 278 LRACTGLALLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKD 337
           L A +    L +G+ +H  V++   + D+I+  +++DMYCKCG +E A   F R M +K+
Sbjct: 296 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR-MKNKN 355

Query: 338 VISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQ 397
           V SW+ MIAG   +G +  AL+LF +M   G +PNYIT + VL ACSHAGL  +GW +F 
Sbjct: 356 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 415

Query: 398 SMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNV 457
           +MK  FG++PG EHYGC++DLLGRAG L +A  LI  MK +PD++ W  LL ACR+HKNV
Sbjct: 416 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 475

Query: 458 DLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEV 517
           +LA  +   + +LD ++ G Y+LLS+IYA+  +W+DV  VR  M+ RG+ K PG S +E+
Sbjct: 476 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 535

Query: 518 SKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHS 577
           + +VH F++GD  HP+ E I   ++ + ++L+  GYV +T+ V  D++ E+ E +L+ HS
Sbjct: 536 NGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHS 595

Query: 578 EKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGV 629
           EKLAI FG+M+     T+ + KNLR+C DCH   KL++++ +R  V+RD  R+HHF++G 
Sbjct: 596 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 655

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BLAST of Carg16129 vs. ExPASy TrEMBL
Match: A0A6J1JFJ7 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484572 PE=3 SV=1)

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 623/628 (99.20%), Postives = 624/628 (99.36%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGG+EQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP
Sbjct: 61  YSELIKCCLVRGGIEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLR CNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRDCNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSK GEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKFGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]
BLAST of Carg16129 vs. ExPASy TrEMBL
Match: A0A6J1FWY5 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448222 PE=3 SV=1)

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 625/628 (99.52%), Postives = 626/628 (99.68%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 628

[Close]
BLAST of Carg16129 vs. ExPASy TrEMBL
Match: A0A0A0KCS7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G117760 PE=3 SV=1)

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 565/628 (89.97%), Postives = 594/628 (94.59%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATS+L  AP     F SVSA SLVDEFTKFCYQRDLPRAMKAMEAM RNRL ADAIT
Sbjct: 1   MRRATSILNHAP----TFCSVSAHSLVDEFTKFCYQRDLPRAMKAMEAMHRNRLSADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRG V+Q RLVHEHVFSNGYEPKTFLINTL+NMYVKFGLLDEA+ LFDEMP
Sbjct: 61  YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNS+LNH AL+FLILMLREGVRPNM+TYSSVLRAC+GLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           S++KVGLESDVFVRSALIDTYSKLGEQ DALNVFNEM+TGDLVVWNSIIGG AQNSDGDE
Sbjct: 181 SILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
            LHLYKRMKRA F ADQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDMY
Sbjct: 241 TLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANL+FTR M +KDVISWSTMIAGLAQNGFS DALKLFE+MK +GPKPNYIT+
Sbjct: 301 CKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITI 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKE FGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMN 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILLSNIYAN+QKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRR MR RGVKK+PGCSWIEVSKQVHAFILGDNSHPRIE+IKRE+S++IQRL+ +GYVPD
Sbjct: 481 VRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLV+Q
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHF+ GVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFRGGVCSCGDYW 624

[Close]
BLAST of Carg16129 vs. ExPASy TrEMBL
Match: A0A6J1CFV1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011143 PE=3 SV=1)

HSP 1 Score: 1159.8 bits (2999), Expect = 0.0e+00
Identity = 570/633 (90.05%), Postives = 603/633 (95.26%), Query Frame = 0 

Query: 3   RATSMLKLAPPWLVRFSSVSA-----SSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWAD 62
           RAT MLKLAPP L RF S SA     +S+VDEFTKFCYQRDLPRAMKAMEAM RNRLWAD
Sbjct: 2   RATVMLKLAPPRLSRFCSSSAFSHHNASVVDEFTKFCYQRDLPRAMKAMEAMHRNRLWAD 61

Query: 63  AITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFD 122
           AITYSELIKCCL+RG VEQGRLVH+HVFSNGY+PKTFLINTLLNMY KFGLLDEAQ LFD
Sbjct: 62  AITYSELIKCCLIRGAVEQGRLVHQHVFSNGYDPKTFLINTLLNMYAKFGLLDEAQNLFD 121

Query: 123 EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQ 182
           +MP+RNVVSWTTMISAYSNSSL + ALEFLILMLREGVRPNMFTYSSVLRAC+GLL+L+Q
Sbjct: 122 KMPERNVVSWTTMISAYSNSSLKYKALEFLILMLREGVRPNMFTYSSVLRACDGLLDLKQ 181

Query: 183 LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSD 242
           LH S+MKVGLESDVFVRSALIDTYSKLGEQ  ALNVFNEMVTGDLVVWNSIIGG AQNSD
Sbjct: 182 LHASIMKVGLESDVFVRSALIDTYSKLGEQIAALNVFNEMVTGDLVVWNSIIGGFAQNSD 241

Query: 243 GDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 302
           GDEAL LYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL
Sbjct: 242 GDEALLLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 301

Query: 303 DMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNY 362
           DMYCKCG+L+DA+LVFT+ M +KDVISWSTMIAGLAQNGFS+DALKLFESMK+RGPKPNY
Sbjct: 302 DMYCKCGTLKDASLVFTK-MVEKDVISWSTMIAGLAQNGFSSDALKLFESMKVRGPKPNY 361

Query: 363 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 422
           ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAG+LDEAVKLIH
Sbjct: 362 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGRLDEAVKLIH 421

Query: 423 EMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWED 482
           EM HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYAN+QKWED
Sbjct: 422 EMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANSQKWED 481

Query: 483 VAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGY 542
           V+EVR+ MRARGVKKEPGCSWIEVSKQVHAF+LGD+SHPR E+IKRE+S++IQRLV VGY
Sbjct: 482 VSEVRKVMRARGVKKEPGCSWIEVSKQVHAFMLGDDSHPRTEEIKRELSQLIQRLVRVGY 541

Query: 543 VPDTNFVLQDLEG--EQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFA 602
           VPDTNFVLQDLEG  EQMEDSLQYHSEKLAIVFGLMSLP EKTIRIRKNLRICGDCH+FA
Sbjct: 542 VPDTNFVLQDLEGEQEQMEDSLQYHSEKLAIVFGLMSLPNEKTIRIRKNLRICGDCHIFA 601

Query: 603 KLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           KLV+QLENRVIV+RDPIRYHHFQ+GVCSCGDYW
Sbjct: 602 KLVSQLENRVIVVRDPIRYHHFQDGVCSCGDYW 633

[Close]
BLAST of Carg16129 vs. ExPASy TrEMBL
Match: A0A5D3BPB2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00500 PE=3 SV=1)

HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 563/628 (89.65%), Postives = 591/628 (94.11%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60
           MRRATS+   AP       SVSA SLVDEFTKFCYQRDLPRAMKAMEAM RNRL ADAIT
Sbjct: 1   MRRATSIFNHAP----AICSVSAHSLVDEFTKFCYQRDLPRAMKAMEAMHRNRLSADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120
           YSELIKCCLVRG V+QGRLVHEHVFSNGYEPKTFLINTL+NMYVKFGLLDEA+ LFDEMP
Sbjct: 61  YSELIKCCLVRGAVQQGRLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNS+LNH ALEFLILMLREGVRPNMFTYSSVLRAC+GLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSNLNHKALEFLILMLREGVRPNMFTYSSVLRACDGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           S+MKVGLESDVFVRSALIDTYSKLG Q DALNVFNEM+TGDLVVWNSIIGG AQNSDGDE
Sbjct: 181 SIMKVGLESDVFVRSALIDTYSKLGAQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           A++LYKRMKRAGF ADQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDMY
Sbjct: 241 AVNLYKRMKRAGFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANL+F R M +KDVISWSTMIAGLAQNGFS DALKLFESMK +GPKPNYIT+
Sbjct: 301 CKCGSLEDANLLFNRMMTEKDVISWSTMIAGLAQNGFSADALKLFESMKSKGPKPNYITI 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMK+ FGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKQHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMN 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILL+NIYAN+QKWED AE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLANIYANSQKWEDAAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRR M  RGVKK+PGCSWIEVSKQVHAFILGDNSHPRIE+IKRE+S++IQ+L+ VGYVPD
Sbjct: 481 VRRKMGTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQKLMRVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 629
           LENRVIVIRDPIRYHHF+ GVCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFRGGVCSCGDYW 624

[Close]
BLAST of Carg16129 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 929.5 bits (2401), Expect = 1.4e-270
Identity = 433/631 (68.62%), Postives = 534/631 (84.63%), Query Frame = 0 

Query: 1   MRRATSMLKLAPPWLV---RFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWAD 60
           M+   S +KL  P +     +SS   + L+ EFT+ CYQRDLPRAMKAM+++Q + LWAD
Sbjct: 1   MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60

Query: 61  AITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFD 120
           + TYSELIKCC+    V +G L+  H++ NG+ P  FL+N L+NMYVKF LL++A +LFD
Sbjct: 61  SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120

Query: 121 EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQ 180
           +MP RNV+SWTTMISAYS   ++  ALE L+LMLR+ VRPN++TYSSVLR+CNG+ ++R 
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180

Query: 181 LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSD 240
           LH  ++K GLESDVFVRSALID ++KLGE +DAL+VF+EMVTGD +VWNSIIGG AQNS 
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240

Query: 241 GDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 300
            D AL L+KRMKRAGF A+Q+TLTSVLRACTGLALLELG Q HVH++K+DQDLILNNAL+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300

Query: 301 DMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNY 360
           DMYCKCGSLEDA  VF + M ++DVI+WSTMI+GLAQNG+S +ALKLFE MK  G KPNY
Sbjct: 301 DMYCKCGSLEDALRVFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 360

Query: 361 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 420
           IT++GVLFACSHAGL++DGWYYF+SMK+L+GIDP REHYGC+IDLLG+AGKLD+AVKL++
Sbjct: 361 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 420

Query: 421 EMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWED 480
           EM+ EPDAVTWR LLGACRV +N+ LA YAAK+++ LDP DAGTY LLSNIYAN+QKW+ 
Sbjct: 421 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 480

Query: 481 VAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGY 540
           V E+R  MR RG+KKEPGCSWIEV+KQ+HAFI+GDNSHP+I ++ ++++++I RL  +GY
Sbjct: 481 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 540

Query: 541 VPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKL 600
           VP+TNFVLQDLEGEQMEDSL++HSEKLA+ FGLM+LP EK IRIRKNLRICGDCH+F KL
Sbjct: 541 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 600

Query: 601 VAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            ++LE R IVIRDPIRYHHFQ+G CSCGDYW
Sbjct: 601 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Carg16129 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 508.4 bits (1308), Expect = 7.9e-144
Identity = 250/573 (43.63%), Postives = 367/573 (64.05%), Query Frame = 0 

Query: 56  ADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKL 115
           AD   Y+ L+K C V   + QGR+VH H+  + +     + NTLLNMY K G L+EA+K+
Sbjct: 58  ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 116 FDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRA------- 175
           F++MP R+ V+WTT+IS YS       AL F   MLR G  PN FT SSV++A       
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 176 CNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSI 235
           C G     QLHG  +K G +S+V V SAL+D Y++ G   DA  VF+ + + + V WN++
Sbjct: 178 CCG----HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 237

Query: 236 IGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQ 295
           I G A+ S  ++AL L++ M R GF     +  S+  AC+    LE G+ VH +++K  +
Sbjct: 238 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 297

Query: 296 DLI--LNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE 355
            L+    N LLDMY K GS+ DA  +F R +A +DV+SW++++   AQ+GF  +A+  FE
Sbjct: 298 KLVAFAGNTLLDMYAKSGSIHDARKIFDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 357

Query: 356 SMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRA 415
            M+  G +PN I+ L VL ACSH+GL+ +GW+Y++ MK+  GI P   HY  ++DLLGRA
Sbjct: 358 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 417

Query: 416 GKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLS 475
           G L+ A++ I EM  EP A  W+ LL ACR+HKN +L  YAA+ + +LDP D G +++L 
Sbjct: 418 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 477

Query: 476 NIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREIS 535
           NIYA+  +W D A VR+ M+  GVKKEP CSW+E+   +H F+  D  HP+ E+I R+  
Sbjct: 478 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 537

Query: 536 RVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLR 595
            V+ ++  +GYVPDT+ V+  ++ ++ E +LQYHSEK+A+ F L++ P   TI I+KN+R
Sbjct: 538 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 597

Query: 596 ICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQE 620
           +CGDCH   KL +++  R I++RD  R+HHF++
Sbjct: 598 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624

[Close]
BLAST of Carg16129 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 485.0 bits (1247), Expect = 9.4e-137
Identity = 236/587 (40.20%), Postives = 375/587 (63.88%), Query Frame = 0 

Query: 49  MQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGL 108
           MQ  R+  D+ T+  L+K C     ++ GR VH  VF  G++   F+ N L+ +Y K   
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169

Query: 109 LDEAQKLFD--EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVL 168
           L  A+ +F+   +P+R +VSWT ++SAY+ +     ALE    M +  V+P+     SVL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229

Query: 169 RACNGLLNLRQ---LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLV 228
            A   L +L+Q   +H S++K+GLE +  +  +L   Y+K G+   A  +F++M + +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289

Query: 229 VWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHV 288
           +WN++I G A+N    EA+ ++  M       D  ++TS + AC  +  LE  R ++ +V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 289 LKFD--QDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDA 348
            + D   D+ +++AL+DM+ KCGS+E A LVF RT+ D+DV+ WS MI G   +G + +A
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGRAREA 409

Query: 349 LKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIID 408
           + L+ +M+  G  PN +T LG+L AC+H+G+V++GW++F  M +   I+P ++HY C+ID
Sbjct: 410 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 469

Query: 409 LLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGT 468
           LLGRAG LD+A ++I  M  +P    W  LL AC+ H++V+L  YAA+++  +DP++ G 
Sbjct: 470 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 529

Query: 469 YILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDI 528
           Y+ LSN+YA  + W+ VAEVR  M+ +G+ K+ GCSW+EV  ++ AF +GD SHPR E+I
Sbjct: 530 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 589

Query: 529 KREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRI 588
           +R++  +  RL   G+V + +  L DL  E+ E++L  HSE++AI +GL+S P+   +RI
Sbjct: 590 ERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRI 649

Query: 589 RKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            KNLR C +CH   KL+++L +R IV+RD  R+HHF++GVCSCGDYW
Sbjct: 650 TKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]
BLAST of Carg16129 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 484.2 bits (1245), Expect = 1.6e-136
Identity = 229/596 (38.42%), Postives = 359/596 (60.23%), Query Frame = 0 

Query: 38   DLPRAMKAMEAMQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
            DL  + +    MQ   +  +  TY  ++K C+  G +E G  +H  +    ++   ++ +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 98   TLLNMYVKFGLLDEAQKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRP 157
             L++MY K G LD A  +      ++VVSWTTMI+ Y+  + +  AL     ML  G+R 
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 158  NMFTYSSVLRACNGLLNLR---QLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVF 217
            +    ++ + AC GL  L+   Q+H      G  SD+  ++AL+  YS+ G+ +++   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 218  NEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLE 277
             +   GD + WN+++ G  Q+ + +EAL ++ RM R G   +  T  S ++A +  A ++
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 278  LGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGL 337
             G+QVH  + K  +D +  + NAL+ MY KCGS+ DA   F   ++ K+ +SW+ +I   
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE-VSTKNEVSWNAIINAY 769

Query: 338  AQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPG 397
            +++GF ++AL  F+ M     +PN++T++GVL ACSH GLV  G  YF+SM   +G+ P 
Sbjct: 770  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 829

Query: 398  REHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 457
             EHY C++D+L RAG L  A + I EM  +PDA+ WR LL AC VHKN+++  +AA  +L
Sbjct: 830  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 889

Query: 458  KLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGD 517
            +L+P D+ TY+LLSN+YA ++KW+     R+ M+ +GVKKEPG SWIEV   +H+F +GD
Sbjct: 890  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 949

Query: 518  NSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMS 577
             +HP  ++I      + +R   +GYV D   +L +L+ EQ +  +  HSEKLAI FGL+S
Sbjct: 950  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1009

Query: 578  LPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGVCSCGDYW 629
            LP    I + KNLR+C DCH + K V+++ NR I++RD  R+HHF+ G CSC DYW
Sbjct: 1010 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]
BLAST of Carg16129 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 469.2 bits (1206), Expect = 5.3e-132
Identity = 243/607 (40.03%), Postives = 378/607 (62.27%), Query Frame = 0 

Query: 38  DLPRAMKAMEAMQRNRLWADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
           D   A+ A  +M++  L+    ++   IK C     +  G+  H+  F  GY+   F+ +
Sbjct: 56  DSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSS 115

Query: 98  TLLNMYVKFGLLDEAQKLFDEMPDRNVVSWTTMISAY--SNSSLNHMALEFLILMLREGV 157
            L+ MY   G L++A+K+FDE+P RN+VSWT+MI  Y  + ++L+ ++L   +L+     
Sbjct: 116 ALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175

Query: 158 RPNMFTYS----SVLRACN-----GLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGE 217
              MF  S    SV+ AC+     GL     +H  ++K G +  V V + L+D Y+K GE
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGL--TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 235

Query: 218 QQDAL--NVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRM-KRAGFAADQSTLTSV 277
              A+   +F+++V  D V +NSI+   AQ+   +EA  +++R+ K      +  TL++V
Sbjct: 236 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 295

Query: 278 LRACTGLALLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKD 337
           L A +    L +G+ +H  V++   + D+I+  +++DMYCKCG +E A   F R M +K+
Sbjct: 296 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR-MKNKN 355

Query: 338 VISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQ 397
           V SW+ MIAG   +G +  AL+LF +M   G +PNYIT + VL ACSHAGL  +GW +F 
Sbjct: 356 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 415

Query: 398 SMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNV 457
           +MK  FG++PG EHYGC++DLLGRAG L +A  LI  MK +PD++ W  LL ACR+HKNV
Sbjct: 416 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 475

Query: 458 DLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEV 517
           +LA  +   + +LD ++ G Y+LLS+IYA+  +W+DV  VR  M+ RG+ K PG S +E+
Sbjct: 476 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 535

Query: 518 SKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHS 577
           + +VH F++GD  HP+ E I   ++ + ++L+  GYV +T+ V  D++ E+ E +L+ HS
Sbjct: 536 NGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHS 595

Query: 578 EKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGV 629
           EKLAI FG+M+     T+ + KNLR+C DCH   KL++++ +R  V+RD  R+HHF++G 
Sbjct: 596 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 655

The following BLAST results are available for this feature:
BLAST of Carg16129 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570970.10.0e+00100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023512954.10.0e+0099.52pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ... [more]
XP_022986985.10.0e+0099.20pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ... [more]
XP_022943463.10.0e+0099.52pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ... [more]
XP_038876633.10.0e+0090.78pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa ... [more]
BLAST of Carg16129 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SI532.0e-26968.62Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q9LIQ71.8e-14844.16Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
Q9LTV81.3e-13540.20Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9SVP72.3e-13538.42Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
Q9LW327.5e-13140.03Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
BLAST of Carg16129 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JFJ70.0e+0099.20pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbit... [more]
A0A6J1FWY50.0e+0099.52pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbit... [more]
A0A0A0KCS70.0e+0089.97DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1177... [more]
A0A6J1CFV10.0e+0090.05pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Momordic... [more]
A0A5D3BPB20.0e+0089.65Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Carg16129 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G03880.11.4e-27068.62Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G24000.17.9e-14443.63Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.19.4e-13740.20mitochondrial editing factor 22 [more]
AT4G13650.11.6e-13638.42Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26782.15.3e-13240.03Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 174..274
e-value: 2.1E-20
score: 74.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 26..173
e-value: 2.6E-31
score: 111.1
coord: 292..515
e-value: 1.5E-40
score: 141.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 200..478
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 494..618
e-value: 6.5E-37
score: 126.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 195..218
e-value: 0.43
score: 10.9
coord: 294..313
e-value: 0.2
score: 12.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 122..169
e-value: 1.0E-10
score: 41.6
coord: 320..366
e-value: 8.3E-8
score: 32.3
coord: 221..267
e-value: 2.2E-9
score: 37.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 223..256
e-value: 3.3E-7
score: 28.1
coord: 396..421
e-value: 6.1E-5
score: 20.9
coord: 96..124
e-value: 0.0011
score: 17.0
coord: 323..356
e-value: 3.2E-6
score: 25.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 388..420
e-value: 6.7E-6
score: 25.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 11.717688
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..422
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 11.509422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..122
score: 9.218511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 123..157
score: 10.435215
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 57..91
score: 8.911594
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 20..571
NoneNo IPR availablePANTHERPTHR47925:SF71PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, MITOCHONDRIALcoord: 20..571

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16129-RACarg16129-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding