Carg16104 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16104
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SNF1-related protein kinase regulatory subunit beta-2-like
Location	Carg_Chr20: 3280945 .. 3285016 (-)
RNA-Seq Expression	Carg16104
Synteny	Carg16104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAGAAAGAAAGAGTGTGGTGGTGGTGGTGGTGGTGGAGAGATTGCAGTGCCGATTTGAGTGTTTTTTATCACTTAAAATCGTGTAATATGTAGAGCTCAAGACCATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATAATTGGGTATCTATCTAACCTAACTCCATGTTTCTCCAACTTGCCTCTGTGCCTTTTTTTTCACTTTTCTTCTTCAAATCTTGCCTTTACTGTGATGACCTGTGCTTTGTCTCTAAGTGATTTCCCCTCCGTATACACTAATTTTGGTTCTTCCGATTGAAATCTCAACTGGGTTTTGCTTTGTTTCTCAGATGGAGACGACCCTTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCTATTTTTTTGGTATCCTGCTCATAGGTTTTCCGAGCCCATACTTGAGTTTTCTGTGCGTTTTGTTCAAATTCATCCTACGCCTTTCATCTCCCCACCCCCCACAGGTAATTTCTTAAGAATCTGGTATCTGGGTATCGTTTCTCCCCTTCAAACAGACCCAATATATGTATGCATGCCTATAAGAATCTGGGTTTTATTCTTCACTGATTTTCTCTGCCACTTCATATGAATTGTGATGTTTGAACAGTATTAGCTTGTGTGTAAGTGTCTGTGGCAGAATTCAAGGATGAAGCACAATTCTTCCTTTTAGTTTCTGAGTACTTAATGATTTGGAATACTTTTTTGAGGTTGAGTTGCAGGCGTTTGAACGTTAAAGGTTATTATACAATGAATAATGAGGGCGTGTCCAACATACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGGAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGTACTACTTTGCAGCTAAGATGTTTGATTCTGGACATGTTTTTTTTTTTGTCTAATACAGAACATTTTATCTCCTTATGTTAGGGAGATGTTACAGAGCTTAGGAAAAGAATTTGTTATTATCAAGACACTCCCCTCAGGGATCTACCATTATCGTTTCATGGTTGATGGATGGCTTACATGTGCTCCTGATTTGCCTTGGGTTTGTGATGATTCTGGACATTCTTACAATGTTCTTGACTTGATGGTAATTCTCGTCTTCGACTTTTATATTCTCGGTTAAGATAATTAATGCCCCGTATATTTGATTTGGGATAAGTTGTCTTTGCATGATTCCATGATCATGTCCTTGAAAAGATATTTGATTTGGCCTGAGCTTTTCTCTAAAATGTCGAACTATTGATTGAGTGTTAGATTTTTCCCAATTCAAAGAGCGATCTAATAGGTTTGTAAAGCTTGGAAGATTAGAGTATCTATAATGGTCCAAGCCCACCGCTAGTAGATATTGTCCGGGCTTAGGCCGTTACAAATAGTATCAAAGCTAGACACCGGATGATGTGTTAGCGAGTAGGTTGAGCCCCAAAGGGGGGTGGACACGAGGCGGTGTGCCAGCTTTGGTGCTTGGGTTGGGGAGTCCCATATCAATGGGAGAAGGGAACGAGTGCTAGCGAGGACGCTGGGTTTCGATGGGGGTGGTTGTGAGATCCCATGTCGGTTGAGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGGAGACAGCGTTTTAAAAACCTTGAGGGGAATCCTGAAAGGGAAAGCCCAAAAAGAACAATATCTGCTAGCGGTAGGCTTGGGCTGTTACCGTATCTATCAAAACAAAATGACAAATGTAGATTCTGGGGGGTTACTATACTTCAAAAAAAGTTCCCAGGAAGGAGATGGGATGGAACAGTTAACTTTGCAATATCGGTTTTGATCTCGGATGCTCGAGTATGAAATCGTGAAAGAGAGAAACAAATCTAGGTTCCTTGTTCTCCTGCCCATTGCTGTGCACCAAGTTCTTGTGAATGAACAAGCCCTGATCCTTCTTTCATTACTTCTGGCTCTTAATTTTGGTTGAATAAATCTTTGTAAAAGAGCTTTGCCTGCCCAGGACTAATTTGAAGTTCTATTGAACTGTTTTACAGACACCCGTCTCGGAATTGCCTGAAAGTCTATCCGAGTTCGAATTTCCTCCATCCCCACCGTCTAGTTATGATAACCAATGCTTCAACGACGACGATTTCAGTAGACCTCCACCAGATCTACCGCCACCACTACGAGAGACTATCTTAAACGAACCATCTTGCTGCACGAGTGGTCATCAGTCTGATGTGCAGCCTCGACACACTGAATTGAACCATTTATACCAAAATAACGTCGGAGGTGAATTCATGGCACTCGGTTCAACATTCAGATTTTGCGAAAAATACGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGATAGGCATTGGTAAACTGTTCTTCCCCCCCTTCTAAATTTGTGGCATACCCTTTTGTATTTCAACCTCGTAGCTGGTATTAATTGAGCATTGAACAATGATTATTTATGTGAAGATTGTGATACTAATAGATTGAAGAGAGCTATGCCGTATGTAAACTCTGTATTCTTTTTCCCTTTTACTTGTGCAGTATGTTTCAAGCCATTGGAAATGAAATGTTGAACCCATTGAACTATTCTCAGGTGTTTCTTTCCTTCTTTTACTATGGAGTTCTATCAGTTTCCATGTTTGTTTTTTTTTGTTCTTTCTGAGCTGTTCATTGCATCCTGTAAATTAATTGAGTTTTGAGTTATTTGCTTCTCATAAGACCCCGACACGCGAACAGCGAGATTGAACCGAGTTACTATAGTGTTCGTATTAGTTTCTGGAATAGAATTACAAATCAAAATAGGCATAGACAATGGGTTTGGTGAGCTGTGAAAGAAGATTCATCTCACTGGAACCTTAACCCAGCCATTGGCAAAAGGTATGGCTAAGATCACGAACGAAGTCGACATGCCGAAGATGATGATATAAGGAAGAGGAGCGAAGATGGAAGATGGGTTTTGTTCGGGGGGAAATTTGATGCTAAGGGAAGAAGAAAGAGGGAATTTGGCGGCCATTATATGGTGAAAAGAAGTGGATTTTGTTGATGCTAAGAGCATTGTAGTGTTAGAATTTGAACTCTGATATCCTCTTTCATTCTTCGTATGAACTCCTCGCACTTCCTGTTCAACTCCTCTAAGCCGATGGTATCAACGCAGTGTCCTTGTTCTTGTTCTTGTTCACGTTCACGTTCACGTTCATCATCCTTCATACCTTCTAATTCATCATTCTGAGCTTCTTCTACAGAGAATGAGAAGATGAAGAAGAAAAGTGCTATGGAAACAGCAAAGATCTTCATAGTTTAATGTGGATTGTGGATTGGAGCAATTAACGCAAAATTTCTCTGCATGTTCTCGTTGACTTCACAACTCCTCATTCTCAACTCTTTCTGCCGCCTATTGCTTCTCCTAATTTCCTCTCATTTGCAATGTAAAAGCCTAGAAGTAGCCGTTATTTGCAATATTTTATTTTATTTTTTGTTAAAATAAAAAATACAATATTTTATTCTACTTACCTATAATTTGTCATATCAATTCACCTATCACTAATAGATATTGTCTGTTTTGACCCGTTACGTATATCCATTGGTTTCATGATTTTAAAACATGATATTGTACAAAGGAATGTTTCGTTCTCCTCTTAAACCGACGTGGGATCTCAAATGTCCCACGGACCTATAATGAATTATTTGTTGAGGTTTATAAGTGAGGAATACTATCTCCATGCGTAGCTTTCAAGACAATATCATACTATTCTCGTGAGTCGTGATTCTAATACTATTGAGAGTAATATAGATATATGTTCAAAGTGGACAATATCATACCATGGCAAGTAATACACGTAATATTTTATGTAAATTAGGTTAAAATTGCTATTACTAAAATTTGTTACGGAAACTGAAATCAAATTGCCCCGATGAATGTAGAAGAACGAAGATCACAACTTGGCGGAGAGAGCTTCAAAGTGGAAGGCGCTAGCTAAAAGATATTTTGCTACTCACTGA

mRNA sequence

AGGAGAAAGAAAGAGTGTGGTGGTGGTGGTGGTGGTGGAGAGATTGCAGTGCCGATTTGAGTGTTTTTTATCACTTAAAATCGTGTAATATGTAGAGCTCAAGACCATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATAATTGGATGGAGACGACCCTTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCTATTTTTTTGGTATCCTGCTCATAGGTTTTCCGAGCCCATACTTGAGTTTTCTGTGCGTTTTGTTCAAATTCATCCTACGCCTTTCATCTCCCCACCCCCCACAGGCGTTTGAACGTTAAAGGTTATTATACAATGAATAATGAGGGCGTGTCCAACATACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGGAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGGAGATGTTACAGAGCTTAGGAAAAGAATTTGTTATTATCAAGACACTCCCCTCAGGGATCTACCATTATCGTTTCATGGTTGATGGATGGCTTACATGTGCTCCTGATTTGCCTTGGGTTTGTGATGATTCTGGACATTCTTACAATGTTCTTGACTTGATGACACCCGTCTCGGAATTGCCTGAAAGTCTATCCGAGTTCGAATTTCCTCCATCCCCACCGTCTAGTTATGATAACCAATGCTTCAACGACGACGATTTCAGTAGACCTCCACCAGATCTACCGCCACCACTACGAGAGACTATCTTAAACGAACCATCTTGCTGCACGAGTGGTCATCAGTCTGATGTGCAGCCTCGACACACTGAATTGAACCATTTATACCAAAATAACGTCGGAGGTGAATTCATGGCACTCGGTTCAACATTCAGATTTTGCGAAAAATACGTCACAATTATGTTTCAAGCCATTGGAAATGAAATGTTGAACCCATTGAACTATTCTCAGAAGAACGAAGATCACAACTTGGCGGAGAGAGCTTCAAAGTGGAAGGCGCTAGCTAAAAGATATTTTGCTACTCACTGA

Coding sequence (CDS)

ATGAATAATGAGGGCGTGTCCAACATACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGGAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGGAGATGTTACAGAGCTTAGGAAAAGAATTTGTTATTATCAAGACACTCCCCTCAGGGATCTACCATTATCGTTTCATGGTTGATGGATGGCTTACATGTGCTCCTGATTTGCCTTGGGTTTGTGATGATTCTGGACATTCTTACAATGTTCTTGACTTGATGACACCCGTCTCGGAATTGCCTGAAAGTCTATCCGAGTTCGAATTTCCTCCATCCCCACCGTCTAGTTATGATAACCAATGCTTCAACGACGACGATTTCAGTAGACCTCCACCAGATCTACCGCCACCACTACGAGAGACTATCTTAAACGAACCATCTTGCTGCACGAGTGGTCATCAGTCTGATGTGCAGCCTCGACACACTGAATTGAACCATTTATACCAAAATAACGTCGGAGGTGAATTCATGGCACTCGGTTCAACATTCAGATTTTGCGAAAAATACGTCACAATTATGTTTCAAGCCATTGGAAATGAAATGTTGAACCCATTGAACTATTCTCAGAAGAACGAAGATCACAACTTGGCGGAGAGAGCTTCAAAGTGGAAGGCGCTAGCTAAAAGATATTTTGCTACTCACTGA

Protein sequence

MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTFRFCEKYVTIMFQAIGNEMLNPLNYSQKNEDHNLAERASKWKALAKRYFATH

Homology

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BLAST of Carg16104 vs. NCBI nr
Match: KAG7010783.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 1.2e-136
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIMFQAIGNEMLNPLNYSQKNEDHNLAERASKWKALAKRYFATH 232
           RFCEKYVTIMFQAIGNEMLNPLNYSQKNEDHNLAERASKWKALAKRYFATH
Sbjct: 181 RFCEKYVTIMFQAIGNEMLNPLNYSQKNEDHNLAERASKWKALAKRYFATH 231

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BLAST of Carg16104 vs. NCBI nr
Match: XP_022943899.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943900.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943901.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943902.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943903.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 6.8e-111
Identity = 188/190 (98.95%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           RFCEKYVT++
Sbjct: 181 RFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. NCBI nr
Match: XP_023513070.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513071.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513072.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513073.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513074.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 4.4e-110
Identity = 187/190 (98.42%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSG+SYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGNSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           RFCEKYVT++
Sbjct: 181 RFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. NCBI nr
Match: XP_022985726.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985727.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985728.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985729.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985730.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 186/190 (97.89%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETRE+LQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETRELLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSG+SYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGNSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           RFCEKYVT++
Sbjct: 181 RFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. NCBI nr
Match: XP_038902665.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.8e-104
Identity = 175/190 (92.11%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNE VSNIPRTSVKISWNHGGKQVAIIGSWDNWETRE+LQS+GKEF+ IKTLPSGIYHY
Sbjct: 1   MNNEEVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREILQSMGKEFITIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSG+SYN+LDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           D+DFSRPPPDLPP LRET+LNEPSCCTS HQS VQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DEDFSRPPPDLPPQLRETVLNEPSCCTSSHQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           +FCEKYVT++
Sbjct: 181 KFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43
Identity = 89/189 (47.09%), Postives = 120/189 (63.49%), Query Frame = 0


Query: 4   EGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFM 63
           E  SN       I+W HGGK++A+ GSWDNW+TR  LQ  GK+F I+K LPSG+Y YRF+
Sbjct: 94  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 153

Query: 64  VDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDD 123
           VDG    AP+LP   DD+G+++N+LDL   V E  +S+S FE P SP +SY N     +D
Sbjct: 154 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 213

Query: 124 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN P+          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 214 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 273

Query: 184 FCEKYVTIM 191
           F  KYVT++
Sbjct: 274 FLAKYVTVV 282

[Close]

BLAST of Carg16104 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I+WN GG  VA+ GSWDNW +R+ LQ  GK+  I+  LPSGIYHY+ +VDG     PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPPL 135
           +V D+ G+  N+LD+   V E PES+ EFE PPSP  SY       +D+++ P  +PP L
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 136 RETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFRFCEKYVTIM 191
             T+L      T       +P+H  LNH++  Q       +ALG T RF  KY+T++
Sbjct: 224 HLTLLG----TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 276

[Close]

BLAST of Carg16104 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.8e-20
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I W+ GGK+V I GS++NW T+  L     +FV I  LP G + Y+F VDG     P  P
Sbjct: 81  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 140

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESL----------SEFEFPPSPPSSYDNQ--CFNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  +   F  ++
Sbjct: 141 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEE 200

Query: 136 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTFRFC 191
             + PP LPP L + ILN+ +  +       +P H  LNHLY  ++    M L +T R+ 
Sbjct: 201 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYK 260

[Close]

BLAST of Carg16104 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I W+ GGK+V I GS++NW T+  L     +FV I  LP G + Y+F VDG     P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESL----------SEFEFPPSPPSSYDNQ--CFNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  +   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 136 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTFRFC 191
             + PP LPP L + ILN+ +  +       +P H  LNHLY  ++    M L +T R+ 
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYK 259

[Close]

BLAST of Carg16104 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-19
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I W+ GGK+V I GS++NW T+  L     +FV I  LP G + Y+F VDG     P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESL----------SEFEFPPSPPSSYDNQ--CFNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  +   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 136 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTFRFC 191
             + PP LPP L + ILN+ +  +       +P H  LNHLY  +     M L +T R+ 
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSTKDSVMVLSATHRYK 259

[Close]

BLAST of Carg16104 vs. ExPASy TrEMBL
Match: A0A6J1FXH3 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111448487 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.3e-111
Identity = 188/190 (98.95%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           RFCEKYVT++
Sbjct: 181 RFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. ExPASy TrEMBL
Match: A0A6J1J923 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111483696 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.8e-110
Identity = 186/190 (97.89%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETRE+LQSLGKEFVIIKTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETRELLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDDSG+SYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGNSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           RFCEKYVT++
Sbjct: 181 RFCEKYVTML 190

[Close]

BLAST of Carg16104 vs. ExPASy TrEMBL
Match: A0A1S4E4K9 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103502112 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 170/190 (89.47%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNE VSN PRTSVKISWNHGGKQVAI+GSWDNWET E+LQS+GKEF+ IKTL SGIYHY
Sbjct: 1   MNNEEVSNTPRTSVKISWNHGGKQVAIVGSWDNWETSEVLQSIGKEFITIKTLSSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDD+G+SYN+LDLMTP SELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDAGNSYNILDLMTPASELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPP LRET+LNEPSCCTSGHQS VQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           +F EKYVT++
Sbjct: 181 KFYEKYVTML 190

[Close]

BLAST of Carg16104 vs. ExPASy TrEMBL
Match: A0A5D3CKW7 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001460 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 169/190 (88.95%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNE VSN PRTSVKISWNHGGKQVAI+GSWDNWET E+LQS+GKEF+ IKTL SGIYHY
Sbjct: 1   MNNEEVSNTPRTSVKISWNHGGKQVAIVGSWDNWETSEVLQSIGKEFITIKTLSSGIYHY 60

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDD+G+SYN+LDLMTP SELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDAGNSYNILDLMTPASELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPP LRET+LNEPSCCTSGHQS VQPRH ELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSGVQPRHIELNHLYQNNVGGEFMALGSTF 180

Query: 181 RFCEKYVTIM 191
           +F EKYVT++
Sbjct: 181 KFYEKYVTML 190

[Close]

BLAST of Carg16104 vs. ExPASy TrEMBL
Match: A0A5A7V520 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00180 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 169/190 (88.95%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60
           MNNE VSN PRTSVKISWNHGGKQVAI+GSWDNWET E+LQS+GKEF+ IKTL SGIYHY
Sbjct: 64  MNNEEVSNTPRTSVKISWNHGGKQVAIVGSWDNWETSEVLQSIGKEFITIKTLSSGIYHY 123

Query: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120
           RFMVDGWLTCAPDLPWVCDD+G+SYN+LDLMTP SELPESLSEFEFPPSPPSSYDNQCFN
Sbjct: 124 RFMVDGWLTCAPDLPWVCDDAGNSYNILDLMTPASELPESLSEFEFPPSPPSSYDNQCFN 183

Query: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPP LRET+LNEPSCCTSGHQS VQPRHTELNHLYQNNVGGE MALGSTF
Sbjct: 184 DDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSGVQPRHTELNHLYQNNVGGELMALGSTF 243

Query: 181 RFCEKYVTIM 191
           +F EKYVT++
Sbjct: 244 KFYEKYVTML 253

[Close]

BLAST of Carg16104 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-44
Identity = 89/189 (47.09%), Postives = 120/189 (63.49%), Query Frame = 0


Query: 4   EGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFM 63
           E  SN       I+W HGGK++A+ GSWDNW+TR  LQ  GK+F I+K LPSG+Y YRF+
Sbjct: 64  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 123

Query: 64  VDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDD 123
           VDG    AP+LP   DD+G+++N+LDL   V E  +S+S FE P SP +SY N     +D
Sbjct: 124 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 183

Query: 124 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN P+          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 184 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 243

Query: 184 FCEKYVTIM 191
           F  KYVT++
Sbjct: 244 FLAKYVTVV 252

[Close]

BLAST of Carg16104 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-44
Identity = 89/189 (47.09%), Postives = 120/189 (63.49%), Query Frame = 0


Query: 4   EGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFM 63
           E  SN       I+W HGGK++A+ GSWDNW+TR  LQ  GK+F I+K LPSG+Y YRF+
Sbjct: 66  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 125

Query: 64  VDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDD 123
           VDG    AP+LP   DD+G+++N+LDL   V E  +S+S FE P SP +SY N     +D
Sbjct: 126 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 185

Query: 124 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN P+          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 186 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 245

Query: 184 FCEKYVTIM 191
           F  KYVT++
Sbjct: 246 FLAKYVTVV 254

[Close]

BLAST of Carg16104 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-42
Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 0


Query: 4   EGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFM 63
           E  SN       I+W HGGK++A+ GSWDNW+T   LQ  GK+F I+K LPSG+Y YRF+
Sbjct: 64  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKT-SRLQRSGKDFTIMKVLPSGVYEYRFI 123

Query: 64  VDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDD 123
           VDG    AP+LP   DD+G+++N+LDL   V E  +S+S FE P SP +SY N     +D
Sbjct: 124 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 183

Query: 124 FSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN P+          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 184 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 243

Query: 184 FCEKYVTIM 191
           F  KYVT++
Sbjct: 244 FLAKYVTVV 251

[Close]

BLAST of Carg16104 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I+WN GG  VA+ GSWDNW +R+ LQ  GK+  I+  LPSGIYHY+ +VDG     PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPPL 135
           +V D+ G+  N+LD+   V E PES+ EFE PPSP  SY       +D+++ P  +PP L
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 136 RETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFRFCEKYVTIM 191
             T+L      T       +P+H  LNH++  Q       +ALG T RF  KY+T++
Sbjct: 224 HLTLLG----TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 276

[Close]

BLAST of Carg16104 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 16  ISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHYRFMVDGWLTCAPDLP 75
           I+WN GG  VA+ GSWDNW +R+ LQ  GK+  I+  LPSGIYHY+ +VDG     PDLP
Sbjct: 141 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 200

Query: 76  WVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPPL 135
           +V D+ G+  N+LD+   V E PES+ EFE PPSP  SY       +D+++ P  +PP L
Sbjct: 201 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 260

Query: 136 RETILNEPSCCTSGHQSDVQPRHTELNHLY--QNNVGGEFMALGSTFRFCEKYVTIM 191
             T+L      T       +P+H  LNH++  Q       +ALG T RF  KY+T++
Sbjct: 261 HLTLLG----TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 313

The following BLAST results are available for this feature:

BLAST of Carg16104 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010783.1	1.2e-136	100.00	SNF1-related protein kinase regulatory subunit beta-2 [Cucurbita argyrosperma su...	[more]
XP_022943899.1	6.8e-111	98.95	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] ...	[more]
XP_023513070.1	4.4e-110	98.42	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp...	[more]
XP_022985726.1	9.8e-110	97.89	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >X...	[more]
XP_038902665.1	2.8e-104	92.11	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa...	[more]

BLAST of Carg16104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	2.2e-43	47.09	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	1.4e-34	43.50	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	9.8e-20	32.62	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	1.3e-19	32.62	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	2.9e-19	32.62	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Carg16104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXH3	3.3e-111	98.95	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A6J1J923	4.8e-110	97.89	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]
A0A1S4E4K9	2.4e-101	89.47	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=36...	[more]
A0A5D3CKW7	1.2e-100	88.95	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. ...	[more]
A0A5A7V520	1.2e-100	88.95	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. ...	[more]

BLAST of Carg16104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	1.5e-44	47.09	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.5e-44	47.09	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	1.4e-42	46.56	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	1.0e-35	43.50	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	1.0e-35	43.50	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 107..194 e-value: 3.6E-12 score: 56.4
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 126..191 e-value: 1.1E-14 score: 54.5
None	No IPR available	GENE3D	6.20.250.60		coord: 100..194 e-value: 5.5E-19 score: 70.1
None	No IPR available	PANTHER	PTHR46316:SF6	SNF1-RELATED KINASE REGULATORY SUBUNIT BETA-2	coord: 3..190
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 13..89 e-value: 1.49139E-20 score: 80.3356
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 13..90 e-value: 1.3E-24 score: 86.2
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 11..90 e-value: 5.0E-20 score: 73.3
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 3..190
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 94..191
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 12..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16104-RA	Carg16104-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding