Carg16098 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16098
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Heat shock protein 90
Location	Carg_Chr20: 3253905 .. 3256029 (-)
RNA-Seq Expression	Carg16098
Synteny	Carg16098

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAAAATACGTCGACCAAAATTATCGGTAAACCCTACTAAAGCCCTTCCCACCTTCCCCTCTGTGAGTTATTCTGTGATTTCAATGCTTTCCCTTACTTCATTCGAGTTTCTACAATATGCACAAGCTCTCCAGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTCTGTGTTCTTTGTCCAAAACGTGAAAACTTCTGTCTGTGTCGTTTTGATGCTTCGGACTTGACATTTTCTTATATCTTTGATGATGGAGTATTTCTGTGTGGGAGGGTTCTGAAATGGGTATAATTAATTGAAATGTTGATAGTTTGTATTACCTGAGTTGAATGTTTTGTGCCTTGGTTGTTCTTTTTTTTTTTTTTTTTTCTCTTTGGTTTAATGATATATTTTGAATCGTCGATGTTGATGAATAGCCTAGTATCTACGATCAACCTTTTGGCGTTTAGATAGAAGTAAAGTATTCCGTAAATGAGTAAGTTTTATTGGGTACTATTTCATTTAATTCAGTATTGTTTTCGTGCTTGGAAGGTCTCTCCGCACCTATTTGAGATTAAGATATTTTGTTGGATTGTTCATATTTGACGGTCATGTCGAGGATGGTTGGGAAAGCATCCTACATCGGCTAATTAAGGGGATGATCATGGGTTTATAAGTAAGAAATAGATCTCCATTGGTATGAGGTCTTTTGGGAAAACCAAAAGCAAAGCCATGAGAGCTAATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTTCTAACGGATTAAAATCCATGTTTTAGACTTTGAAGGTCTCCTTGTTGCATTATTATGGTGGTTTATGTTGAAAGTTTAGCTTTGTGCTTCTCTGTTTTGGTGTTGAACTACTCTGCTGGATTGTTGATTTTCTGAAATATGGAATGGATAATCACATATGCTTGACAATTTTCAGGTGGGCGAGATTGATGGTAAAGTCAGACGGTACCCATTGCTAGCGTCTGGACATTTGGATAAAACATACTTTTTCCTTGACCCACCGATTTGAATCAACTGCCACAGCATCTGATGCATCGGCTACTCCTCCAGTTGAGAATTACGAGTATCAAGCAGAGGCATGTTCCTTTGAATATGAAACTATATACTAATTTGGAACTAAAATCTTAATGTTTAAGTTCACCAATCACCTTTTATATTCGTGTTTCTTTTTCGTGCCAGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGGTTATTTATTATCAATGTTTGGCTCGTTTCTTTTTCTAGAAGCTTACCTTTTGATACCTGAATTGAATATTGGTTTCTGCCTCTTCAACCTTCACAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATGTAAGGGTTCTGCTATTTTGCATCCCCCCCCCCTCCTCCTCCATACCGACAATGCTGCAACATTTGCAACCTGTTTTCTATCTCTATGCAGTGATACTGGCATAGGTATGACTAGGCAAGAACTTGTTGACTGCCTTGGTACTATTGCCCAGAGTAGTCTGTCTGTCTTCTTTCATCCTCACTTCTCCAACACTCTATTGGGAAACTATGGGATGACAGCTTACACAACAGAATCTATTAATTGTAATCTAATTAATGATTTTTCTTTACAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAAGTACTGGGATTGGGAGCTCACTAATGAGACCCAACCAATATGGGTGAGCTCACAACTTCTTTACTTTCCTGTTTTGTTGTTAAATCGCTGTTACTTCTAAGCAACTAAAGGGTGCTATTCCTATATGTATTTGTAGCTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

mRNA sequence

ATGGTTAAAAATACGTCGACCAAAATTATCGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATTGATACTGGCATAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAACTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

Coding sequence (CDS)

ATGGTTAAAAATACGTCGACCAAAATTATCGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATTGATACTGGCATAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAACTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

Protein sequence

MVKNTSTKIIDALSLLFLALVELYRRNAASALAPATHASVLTNTVSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE

Homology

[Close]

BLAST of Carg16098 vs. NCBI nr
Match: KAG7010777.1 (Heat shock protein 90-6, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MVKNTSTKIIDALSLLFLALVELYRRNAASALAPATHASVLTNTVSRLMDLIVNSLYSNK 60
           MVKNTSTKIIDALSLLFLALVELYRRNAASALAPATHASVLTNTVSRLMDLIVNSLYSNK
Sbjct: 1   MVKNTSTKIIDALSLLFLALVELYRRNAASALAPATHASVLTNTVSRLMDLIVNSLYSNK 60

Query: 61  EAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGIISIIDTGIEEEEE 120
           EAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGIISIIDTGIEEEEE
Sbjct: 61  EAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGIISIIDTGIEEEEE 120

Query: 121 NRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           NRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE
Sbjct: 121 NRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 162

[Close]

BLAST of Carg16098 vs. NCBI nr
Match: KAG6570938.1 (Heat shock protein 90-6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 3.6e-58
Identity = 141/198 (71.21%), Postives = 143/198 (72.22%), Query Frame = 0


Query: 11  DALSLLFLALVELYRRNAASALAPATHASVLTNT-----------------------VSR 70
           DALSLLFLALVELYRRNAASALAPATHASVLTNT                       VSR
Sbjct: 40  DALSLLFLALVELYRRNAASALAPATHASVLTNTVGEIDASDASATPPVENYEYQAEVSR 99

Query: 71  LMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGI 130
           LMDLIVNSLYSNKEAFL ELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGI
Sbjct: 100 LMDLIVNSLYSNKEAFLLELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGI 159

Query: 131 ISIIDTGI-EEEEENRDCC----------------------VELRNPKEVSTEEYNEFYR 163
           ISI DTGI    +E  DC                       + LRNPKEVSTEEYNEFYR
Sbjct: 160 ISITDTGIGMTRQELVDCLGTIAQSSLSKYWDWELTNETQPIWLRNPKEVSTEEYNEFYR 219

[Close]

BLAST of Carg16098 vs. NCBI nr
Match: RWW33845.1 (hypothetical protein GW17_00001428 [Ensete ventricosum] >RWW70004.1 hypothetical protein BHE74_00022353 [Ensete ventricosum] >RZS10163.1 hypothetical protein BHM03_00041334 [Ensete ventricosum])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-27
Identity = 73/118 (61.86%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT   LL +A D  I I  D D
Sbjct: 92  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSLLGDAGDLEIRIKPDPD 151

Query: 105 NGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           NG I+I    +           ++RNPKEV  +EYNEFY+KT NE+LDPLA +HFTTE
Sbjct: 152 NGTITITFILVN---------FQMRNPKEVEKDEYNEFYKKTFNEFLDPLAHTHFTTE 200

[Close]

BLAST of Carg16098 vs. NCBI nr
Match: QHO26460.1 (Heat shock protein-6 [Arachis hypogaea])

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 77/126 (61.11%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHIC-IHSDK 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFL VT P LLK+A+D        D+
Sbjct: 94  VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLGVTEPELLKDAVDEDPAEAKKDE 153

Query: 105 DNG-------IISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLAS 163
           ++G         ++++   + E  N    + LRNPKEV+ E+YNEFY+KT NEYL+PLAS
Sbjct: 154 EDGKTEKKKKTKTVVERYWDWELINETQPIWLRNPKEVTKEDYNEFYKKTFNEYLEPLAS 213

[Close]

BLAST of Carg16098 vs. NCBI nr
Match: RLN22734.1 (heat shock protein 90-6, mitochondrial [Panicum miliaceum])

HSP 1 Score: 131.3 bits (329), Expect = 7.3e-27
Identity = 91/203 (44.83%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 3   KNTSTKIIDALSLLFLALVELYRRNAASAL----APATHASVLTNTVSRLMDLIVNSLYS 62
           K + T  + +L ++  ALV     ++A+A+     P          V+RLMDLIV+SLYS
Sbjct: 51  KVSGTSNVASLKVMDGALVGRRYESSAAAVDSTDMPPAEKHEYQADVNRLMDLIVHSLYS 110

Query: 63  NKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGI----------- 122
           NKE FLREL+SNASDALDKLR+LSVT P LLK+  +  I I +DKDNGI           
Sbjct: 111 NKEVFLRELVSNASDALDKLRYLSVTDPELLKDGPELDIRIQTDKDNGIRDNKGFAHPKR 170

Query: 123 -----------ISI---------------IDTGIEEEEENRDCCVE--LRNPKEVSTEEY 163
                      +S                +D   EE E+  D   +  LRNPKEVSTEEY
Sbjct: 171 IQKLVKNYSQFVSFPIYTWQVKGFTKEVEVDEDPEETEKEGDAGTQTHLRNPKEVSTEEY 230

[Close]

BLAST of Carg16098 vs. ExPASy Swiss-Prot
Match: F4JFN3 (Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A D  I I++DK+
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYADKE 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGII++ D+GI    +E  DC
Sbjct: 163 NGIITLTDSGIGMTRQELVDC 183

HSP 2 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 101 SDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFT 160
           ++K      +++   + E  N    + LRNPKEV+T EYNEFYRK  NEYLDPLASSHFT
Sbjct: 333 TEKKKKTKKVVERYWDWELTNETQPIWLRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFT 392

Query: 161 TE 163
           TE
Sbjct: 393 TE 394

[Close]

BLAST of Carg16098 vs. ExPASy Swiss-Prot
Match: Q9SIF2 (Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-19
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT P LL +  D  I I  D D
Sbjct: 85  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDGGDLEIRIKPDPD 144

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NG I+I DTGI   +EE  DC
Sbjct: 145 NGTITITDTGIGMTKEELIDC 165

HSP 2 Score: 53.5 bits (127), Expect = 2.5e-06
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           +RN KEV   EYNEFY+K  NE+LDPLA +HFTTE
Sbjct: 337 MRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTE 371

[Close]

BLAST of Carg16098 vs. ExPASy Swiss-Prot
Match: Q22235 (Endoplasmin homolog OS=Caenorhabditis elegans OX=6239 GN=enpl-1 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.9e-16
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           V+R+M LI+NSLY NKE FLRELISNASDALDK+R LS+T P  L+E  +  + I +D++
Sbjct: 70  VNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETEEMSVKIKADRE 129

Query: 105 NGIISIIDTGI 116
           N ++ I DTG+
Sbjct: 130 NRLLHITDTGV 140

[Close]

BLAST of Carg16098 vs. ExPASy Swiss-Prot
Match: P41887 (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swo1 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           +S+LM LI+N++YSNKE FLRELISNASDALDK+R+ S++ P  L    D  I I  DK+
Sbjct: 13  ISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKE 72

Query: 105 NGIISIIDTGI 116
           N I+SI DTGI
Sbjct: 73  NKILSIRDTGI 83

[Close]

BLAST of Carg16098 vs. ExPASy Swiss-Prot
Match: P36183 (Endoplasmin homolog OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKE--AIDFHICIHSD 104
           VSRLMD+I+NSLYSNK+ FLRELISNASDALDK+RFL++T   ++ E       I I  D
Sbjct: 86  VSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLD 145

Query: 105 KDNGIISIIDTGIEEEEEN 122
           K+N I+SI D G+   +E+
Sbjct: 146 KENKILSIRDRGVGMTKED 164

[Close]

BLAST of Carg16098 vs. ExPASy TrEMBL
Match: A0A444GG24 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00001428 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 73/118 (61.86%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT   LL +A D  I I  D D
Sbjct: 92  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSLLGDAGDLEIRIKPDPD 151

Query: 105 NGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           NG I+I    +           ++RNPKEV  +EYNEFY+KT NE+LDPLA +HFTTE
Sbjct: 152 NGTITITFILVN---------FQMRNPKEVEKDEYNEFYKKTFNEFLDPLAHTHFTTE 200

[Close]

BLAST of Carg16098 vs. ExPASy TrEMBL
Match: A0A3L6SLS8 (Heat shock protein 90-6, mitochondrial OS=Panicum miliaceum OX=4540 GN=C2845_PM07G03230 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-27
Identity = 91/203 (44.83%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 3   KNTSTKIIDALSLLFLALVELYRRNAASAL----APATHASVLTNTVSRLMDLIVNSLYS 62
           K + T  + +L ++  ALV     ++A+A+     P          V+RLMDLIV+SLYS
Sbjct: 51  KVSGTSNVASLKVMDGALVGRRYESSAAAVDSTDMPPAEKHEYQADVNRLMDLIVHSLYS 110

Query: 63  NKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGI----------- 122
           NKE FLREL+SNASDALDKLR+LSVT P LLK+  +  I I +DKDNGI           
Sbjct: 111 NKEVFLRELVSNASDALDKLRYLSVTDPELLKDGPELDIRIQTDKDNGIRDNKGFAHPKR 170

Query: 123 -----------ISI---------------IDTGIEEEEENRDCCVE--LRNPKEVSTEEY 163
                      +S                +D   EE E+  D   +  LRNPKEVSTEEY
Sbjct: 171 IQKLVKNYSQFVSFPIYTWQVKGFTKEVEVDEDPEETEKEGDAGTQTHLRNPKEVSTEEY 230

[Close]

BLAST of Carg16098 vs. ExPASy TrEMBL
Match: A0A0D2M1M3 (HATPase_c domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_001G220600 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27
Identity = 91/213 (42.72%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A+D  I I +DKD
Sbjct: 104 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTDPQLSKDAVDLDIRIQTDKD 163

Query: 105 NGIISIIDTGI------------------------------------------------- 163
           NGII+I D+GI                                                 
Sbjct: 164 NGIITITDSGIGMTRQELVDCLGTIAQSGTAKFLKAVKESKDAGTDNNLIGQFGVGFYSA 223

[Close]

BLAST of Carg16098 vs. ExPASy TrEMBL
Match: A0A0R0GHB3 (HATPase_c domain-containing protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183

[Close]

BLAST of Carg16098 vs. ExPASy TrEMBL
Match: A0A0R0GHB3 (HATPase_c domain-containing protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-07
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 360 LRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 394

HSP 2 Score: 119.4 bits (298), Expect = 1.4e-23
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183

[Close]

BLAST of Carg16098 vs. TAIR 10
Match: AT3G07770.1 (HEAT SHOCK PROTEIN 89.1 )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A D  I I++DK+
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYADKE 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGII++ D+GI    +E  DC
Sbjct: 163 NGIITLTDSGIGMTRQELVDC 183

HSP 2 Score: 64.7 bits (156), Expect = 7.8e-11
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 101 SDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFT 160
           ++K      +++   + E  N    + LRNPKEV+T EYNEFYRK  NEYLDPLASSHFT
Sbjct: 333 TEKKKKTKKVVERYWDWELTNETQPIWLRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFT 392

Query: 161 TE 163
           TE
Sbjct: 393 TE 394

[Close]

BLAST of Carg16098 vs. TAIR 10
Match: AT2G04030.1 (Chaperone protein htpG family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT P LL +  D  I I  D D
Sbjct: 85  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDGGDLEIRIKPDPD 144

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NG I+I DTGI   +EE  DC
Sbjct: 145 NGTITITDTGIGMTKEELIDC 165

HSP 2 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           +RN KEV   EYNEFY+K  NE+LDPLA +HFTTE
Sbjct: 337 MRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTE 371

[Close]

BLAST of Carg16098 vs. TAIR 10
Match: AT2G04030.2 (Chaperone protein htpG family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT P LL +  D  I I  D D
Sbjct: 85  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDGGDLEIRIKPDPD 144

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NG I+I DTGI   +EE  DC
Sbjct: 145 NGTITITDTGIGMTKEELIDC 165

HSP 2 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           +RN KEV   EYNEFY+K  NE+LDPLA +HFTTE
Sbjct: 337 MRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTE 371

[Close]

BLAST of Carg16098 vs. TAIR 10
Match: AT4G24190.1 (Chaperone protein htpG family protein )

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-15
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKE--AIDFHICIHSD 104
           VSRLMD+I+NSLYSNK+ FLRELISNASDALDK+RFL++T   +L E       I I  D
Sbjct: 85  VSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLD 144

Query: 105 KDNGIISIIDTGIEEEEEN 122
           K   I+SI D GI   +E+
Sbjct: 145 KAKKILSIRDRGIGMTKED 163

[Close]

BLAST of Carg16098 vs. TAIR 10
Match: AT4G24190.2 (Chaperone protein htpG family protein )

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-15
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKE--AIDFHICIHSD 104
           VSRLMD+I+NSLYSNK+ FLRELISNASDALDK+RFL++T   +L E       I I  D
Sbjct: 85  VSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLD 144

Query: 105 KDNGIISIIDTGIEEEEEN 122
           K   I+SI D GI   +E+
Sbjct: 145 KAKKILSIRDRGIGMTKED 163

The following BLAST results are available for this feature:

BLAST of Carg16098 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010777.1	1.1e-80	100.00	Heat shock protein 90-6, mitochondrial, partial [Cucurbita argyrosperma subsp. a...	[more]
KAG6570938.1	3.6e-58	71.21	Heat shock protein 90-6, mitochondrial, partial [Cucurbita argyrosperma subsp. s...	[more]
RWW33845.1	2.5e-27	61.86	hypothetical protein GW17_00001428 [Ensete ventricosum] >RWW70004.1 hypothetical...	[more]
QHO26460.1	3.3e-27	61.11	Heat shock protein-6 [Arachis hypogaea]	[more]
RLN22734.1	7.3e-27	44.83	heat shock protein 90-6, mitochondrial [Panicum miliaceum]	[more]

BLAST of Carg16098 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JFN3	2.1e-21	70.37	Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-...	[more]
Q9SIF2	2.6e-19	67.90	Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-...	[more]
Q22235	7.9e-16	57.75	Endoplasmin homolog OS=Caenorhabditis elegans OX=6239 GN=enpl-1 PE=3 SV=1	[more]
P41887	3.0e-15	60.56	Heat shock protein 90 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P36183	1.9e-14	56.96	Endoplasmin homolog OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of Carg16098 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444GG24	1.2e-27	61.86	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00001428 PE=3 SV=1	[more]
A0A3L6SLS8	3.5e-27	44.83	Heat shock protein 90-6, mitochondrial OS=Panicum miliaceum OX=4540 GN=C2845_PM0...	[more]
A0A0D2M1M3	6.0e-27	42.72	HATPase_c domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_001G...	[more]
A0A0R0GHB3	1.4e-23	81.48	HATPase_c domain-containing protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=...	[more]
A0A0R0GHB3	2.4e-07	85.71	HATPase_c domain-containing protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=...	[more]

Pages

BLAST of Carg16098 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07770.1	1.5e-22	70.37	HEAT SHOCK PROTEIN 89.1	[more]
AT2G04030.1	1.9e-20	67.90	Chaperone protein htpG family protein	[more]
AT2G04030.2	1.9e-20	67.90	Chaperone protein htpG family protein	[more]
AT4G24190.1	6.8e-15	58.23	Chaperone protein htpG family protein	[more]
AT4G24190.2	6.8e-15	58.23	Chaperone protein htpG family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020575	Heat shock protein Hsp90, N-terminal	PRINTS	PR00775	HEATSHOCK90	coord: 37..57 score: 31.65 coord: 58..80 score: 84.41 coord: 107..124 score: 26.32
IPR001404	Heat shock protein Hsp90 family	PFAM	PF00183	HSP90	coord: 114..162 e-value: 2.5E-8 score: 33.5
IPR001404	Heat shock protein Hsp90 family	PANTHER	PTHR11528	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	coord: 121..162 coord: 29..117
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	3.30.565.10		coord: 42..148 e-value: 3.1E-25 score: 90.9
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	SUPERFAMILY	55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 44..115
None	No IPR available	PANTHER	PTHR11528:SF106	BNAA05G29880D PROTEIN	coord: 121..162 coord: 29..117
IPR019805	Heat shock protein Hsp90, conserved site	PROSITE	PS00298	HSP90	coord: 57..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16098-RA	Carg16098-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0048471	perinuclear region of cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051082	unfolded protein binding