Carg16091 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16091
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Carg_Chr20: 3213980 .. 3216961 (-)
RNA-Seq Expression	Carg16091
Synteny	Carg16091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTGATAGCGGCAAATTATTTGTTGGTGGGATATCTTGGGATACTGATGAAGACCGGCTTAAAGAGTATTTCAGTGCCTTTGGGGAGGTTGTAGAAGCTGTCATTATGAAGGATCGGACTACAGGTCGGGGTCGAGGCTTCGGCTTCATAGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTGAGTTTTTAACCTGAATGTGTATCATATGACCTGCAGAGATAGCTCATTTTTTGTTAGCTTATGGATCAACATGTTTTGTTGAGTTCTTATTTTCTTCCTTAGTGAAATTTCTAATTTCCTGATTAGTTTTTCAGCTTGACTTCAATCAAATAGTCCGCATTTGTCATTTTAATGCTATTTGAACTCGATCTTCATTCCCAGGTTGAGGCGAAAAGGGCTGTTCCTAGAAACGACCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTAGAAAGATATTTGTTGGGGGCTTAGCATCTACTGTTACAGAGAGTGAATTTAAGAATTATTTTGATCAATTCGGAACAATTACGGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGTTTCGGGTTTATTACATATGATTCGGAAGAAGCGGTCGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGAAAAATGGTTGAAGTCAAGCGTGCAGTTCCAAAAGAGTTGTCACCAGGCCCAAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTATAGTTCAAGTACAATTGGAGGTTATGGGGTTAGAATGGATGGTAGATTTAGTCCAGTTTCTAGTGGTCGAAGTGTATTCACTCCGTTCAGTTCGGGTTATGGAATGGGCGTGAACTTTGAGATTGGCTTGAATCCAGGGTACGGGGGAAGTTCCAATTTTACCAATAATCTCAATTATGGACGGGGACTGAGCCCGTATTATACTGGTAATTCGGATAGATTTGGCAATATAGGGTATGAGAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCTACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAACTCCAATGCTCATTTGGGATCGGCAAGCGTCGGCGGCGGCATTGGGGGAACTGCATTTGCCAATTCTGGAGTTAACTGGGGTAGCTCCGGAATCTTGTCTCAAGGTGGAGGAAACAATGTGTTTAGTAACTCTGGGAATCATAATTATGGAGGTATTGACAGTAGTTATAGTATAGGAGCTGGAGGATATGGGAGGAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGGCCTTTTGCAGATTTCTACAATGCCAGTTATGGCGATCTCACGTGGCGATCTTCCAATTTTGAAAGAGACGTCTCTGGACCCTTTGGTTATGGACTCGGCAATGCTGCTTCTGATGTCTCATCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGTTAGAGCCACTGTTTCAAAATTTATACAATGCTTCATTATTTGTTTCAGCAGTATCTCCTGGTTTATCTCATCAAGAATTTTGTTTTTCAAATGCTCAGATTATGAACATCCAAATGTAGATTTATATTTATTTGATCTTGCAGAAAGCTGTTTCAATTCTGCACTTGATGATTTAGAGATTAGCTGTTTTAGATACCAGATTTAGATACTATACATGAATGATTTGAGTTACCAACCGAACAAACTTGTATCGTTAAGTGGGTTGCCCTATATATACATTTTCTGGGAAAGATATATGTTCAGTATGTTCGTATAGCCGAAAAGTAACATGGTTATATTGTAAGAACGTTTAGAGATAGGTCCCAATGAACCTTACTACGAATGTCAACAAGAATAGCTTATATAGTCATACTGATTGAAGTTATTGAGTTATCTAGATGAAGGGCATTCAAATATCAAACTGTCATAAAATATTCAACTGATTTTTTTCTTTTTCATGAAAAGTTGATCTCTCTCATTGTCACTCCCTTGCATTTGGTGATTGATTTTTGTTCGTCCTGTTACAGGACTGTAACCTCTTCGTGTTTACGTGCACAGATATCCTTGCAAGCCTGCAATTGTGCAGCTCACTCATTCTAACTTGATAAGCTCAAGCATTTGACTAATTCTAGGACATTGTAAATGCATAACAACCTCATGGTTGAACCTCCTCTTTGATACACTAAAAGACATGGCTGTTGCTGTTTCTTTCTATGCTCATTATCACTCAGAGTCAGAGTCAGAACTAGTAGTGAAATTATGCATTTAGTATGTCCTAAACTATATCCTGTTTCATTTAATCATGTAATCATTCGGACATCGATTAAATTTAATACAGTCTTTTTGTATGCTTTCCTTAACTAGTGTGAACCAAAATCACAAAATGCTATCAGATTATCTCTGATGTGGTATTAAGTTTAGGATATAAGTGCTGTTAGCAAGTGGCACGACAGCGTTATGTATCATTCTGTGCTAAATGATCTCGTCGTCGCATTGTTCTTCTTCCTCCTTTTATCTGTTGTAGTTTTCTGGTGAAAAATAGTGTTAATACTGAGTATCCTCCTCATTTTTTGGTTCAGGAAACACTACCTAGGAACGATCGGATATGTCAACATAGTAGATGAAGATAATTGGTGAAGAACGTGAAGTTGCAGATAATCAAATAGAATATTCAGTTGAATTACCCAACAAAAAAAGGGGGAAAAAGAAGAATTATCTATAAAGCTAACTGAGTGCCGATGCTGAAAACCAAGCTTAGAGGTATTTAGCCACTTGGGATTTTGTGTTCAGGTTTGAGTTTTGATTAGAAAATTTTCT

mRNA sequence

ATGCAAACTGATAGCGGCAAATTATTTGTTGGTGGGATATCTTGGGATACTGATGAAGACCGGCTTAAAGAGTATTTCAGTGCCTTTGGGGAGGTTGTAGAAGCTGTCATTATGAAGGATCGGACTACAGGTCGGGGTCGAGGCTTCGGCTTCATAGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCGAAAAGGGCTGTTCCTAGAAACGACCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTAGAAAGATATTTGTTGGGGGCTTAGCATCTACTGTTACAGAGAGTGAATTTAAGAATTATTTTGATCAATTCGGAACAATTACGGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGTTTCGGGTTTATTACATATGATTCGGAAGAAGCGGTCGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGAAAAATGGTTGAAGTCAAGCGTGCAGTTCCAAAAGAGTTGTCACCAGGCCCAAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTATAGTTCAAGTACAATTGGAGGTTATGGGGTTAGAATGGATGGTAGATTTAGTCCAGTTTCTAGTGGTCGAAGTGTATTCACTCCGTTCAGTTCGGGTTATGGAATGGGCGTGAACTTTGAGATTGGCTTGAATCCAGGGTACGGGGGAAGTTCCAATTTTACCAATAATCTCAATTATGGACGGGGACTGAGCCCGTATTATACTGGTAATTCGGATAGATTTGGCAATATAGGGTATGAGAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCTACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAACTCCAATGCTCATTTGGGATCGGCAAGCGTCGGCGGCGGCATTGGGGGAACTGCATTTGCCAATTCTGGAGTTAACTGGGGTAGCTCCGGAATCTTGTCTCAAGGTGGAGGAAACAATGTGTTTAGTAACTCTGGGAATCATAATTATGGAGGTATTGACAGTAGTTATAGTATAGGAGCTGGAGGATATGGGAGGAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGGCCTTTTGCAGATTTCTACAATGCCAGTTATGGCGATCTCACGTGGCGATCTTCCAATTTTGAAAGAGACGTCTCTGGACCCTTTGGTTATGGACTCGGCAATGCTGCTTCTGATGTCTCATCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGAAACACTACCTAGGAACGATCGGATATGTCAACATAGTAGATGAAGATAATTGGTGAAGAACGTGAAGTTGCAGATAATCAAATAGAATATTCAGTTGAATTACCCAACAAAAAAAGGGGGAAAAAGAAGAATTATCTATAAAGCTAACTGAGTGCCGATGCTGAAAACCAAGCTTAGAGGTATTTAGCCACTTGGGATTTTGTGTTCAGGTTTGAGTTTTGATTAGAAAATTTTCT

Coding sequence (CDS)

ATGCAAACTGATAGCGGCAAATTATTTGTTGGTGGGATATCTTGGGATACTGATGAAGACCGGCTTAAAGAGTATTTCAGTGCCTTTGGGGAGGTTGTAGAAGCTGTCATTATGAAGGATCGGACTACAGGTCGGGGTCGAGGCTTCGGCTTCATAGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCGAAAAGGGCTGTTCCTAGAAACGACCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTAGAAAGATATTTGTTGGGGGCTTAGCATCTACTGTTACAGAGAGTGAATTTAAGAATTATTTTGATCAATTCGGAACAATTACGGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGTTTCGGGTTTATTACATATGATTCGGAAGAAGCGGTCGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGAAAAATGGTTGAAGTCAAGCGTGCAGTTCCAAAAGAGTTGTCACCAGGCCCAAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTATAGTTCAAGTACAATTGGAGGTTATGGGGTTAGAATGGATGGTAGATTTAGTCCAGTTTCTAGTGGTCGAAGTGTATTCACTCCGTTCAGTTCGGGTTATGGAATGGGCGTGAACTTTGAGATTGGCTTGAATCCAGGGTACGGGGGAAGTTCCAATTTTACCAATAATCTCAATTATGGACGGGGACTGAGCCCGTATTATACTGGTAATTCGGATAGATTTGGCAATATAGGGTATGAGAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCTACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAACTCCAATGCTCATTTGGGATCGGCAAGCGTCGGCGGCGGCATTGGGGGAACTGCATTTGCCAATTCTGGAGTTAACTGGGGTAGCTCCGGAATCTTGTCTCAAGGTGGAGGAAACAATGTGTTTAGTAACTCTGGGAATCATAATTATGGAGGTATTGACAGTAGTTATAGTATAGGAGCTGGAGGATATGGGAGGAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGGCCTTTTGCAGATTTCTACAATGCCAGTTATGGCGATCTCACGTGGCGATCTTCCAATTTTGAAAGAGACGTCTCTGGACCCTTTGGTTATGGACTCGGCAATGCTGCTTCTGATGTCTCATCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGAAACACTACCTAG

Protein sequence

MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT

Homology

[Close]

BLAST of Carg16091 vs. NCBI nr
Match: XP_023513357.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513358.1 heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513359.1 heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6570929.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010770.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 938.3 bits (2424), Expect = 2.5e-269
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 477

[Close]

BLAST of Carg16091 vs. NCBI nr
Match: XP_022944676.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita moschata] >XP_022944677.1 heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 936.0 bits (2418), Expect = 1.3e-268
Identity = 476/477 (99.79%), Postives = 476/477 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNS NHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSANHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 477

[Close]

BLAST of Carg16091 vs. NCBI nr
Match: XP_023513360.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932.6 bits (2409), Expect = 1.4e-267
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 475
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 474

[Close]

BLAST of Carg16091 vs. NCBI nr
Match: XP_022986138.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >XP_022986139.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 931.4 bits (2406), Expect = 3.1e-267
Identity = 476/479 (99.37%), Postives = 476/479 (99.37%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVS--PGPGRTRKIFVGGLASTVT 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVS  PGPGRTRKIFVGGLASTVT
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGPGRTRKIFVGGLASTVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV
Sbjct: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG 240
           KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG
Sbjct: 181 KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG 240

Query: 241 RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG 300
           RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG
Sbjct: 241 RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG 300

Query: 301 NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI 360
           NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI
Sbjct: 301 NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI 360

Query: 361 LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADF 420
           LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPP SSFPTSTVGFDGPFADF
Sbjct: 361 LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPASSFPTSTVGFDGPFADF 420

Query: 421 YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 479

[Close]

BLAST of Carg16091 vs. NCBI nr
Match: XP_022944679.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 930.2 bits (2403), Expect = 6.9e-267
Identity = 473/474 (99.79%), Postives = 473/474 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNS NHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSANHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 475
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 474

[Close]

BLAST of Carg16091 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-65
Identity = 173/430 (40.23%), Postives = 241/430 (56.05%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M +D GKLFVGGISW+TDED+L+E+F+ +GEV +A++M+D+ TGR RGFGF++F+DPSV 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPG-----RTRKIFVGGLAS 120
           DRV++EKH+ID R V+ KRA+ R +Q + GRT G++N S   G     +T+KIFVGGL  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRT-GNLNTSRSSGGDAYNKTKKIFVGGLPP 120

Query: 121 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 180
           T+T+ EF+ YF+ +G +TDV +MYD  T RPRGFGF+++DSE+AV+ VL KTFH+L+GK 
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGR--FS 240
           VEVKRA+PK+ +PG     +GG   G         GY QGY  +    Y  RMD      
Sbjct: 181 VEVKRALPKDANPGGGGRSMGGGGSG---------GY-QGYGGNE-SSYDGRMDSNRFLQ 240

Query: 241 PVSSGRSVFTPFSSGYGMGVNFEIGLN-PGYGGSSNFTNNL-NYGRGLSPYYTGNSDRFG 300
             S G  + +  SSGYG G  +  G N  GYG    +T +   YG G +  Y   +    
Sbjct: 241 HQSVGNGLPSYGSSGYGAG--YGNGSNGAGYGAYGGYTGSAGGYGAGATAGY--GATNIP 300

Query: 301 NIGYESGNG---------------GNSSFFSSATQNLWGSGGLNNGTNS----------- 360
             GY S  G               GN  + S A  + +G  G    T S           
Sbjct: 301 GAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGY 360

Query: 361 ---ANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILSQGGGNNVFSNSGNHNYGGIDSS 393
              + S++  G+ +  G +GG        N GS G +  G G+  + +  +  YGG    
Sbjct: 361 GGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQGYGG---G 411

[Close]

BLAST of Carg16091 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.3e-46
Identity = 96/199 (48.24%), Postives = 135/199 (67.84%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M  D  KLFVGGI+ +T E+ LK+YFS +G V+EAV+ K++ TG+ RGFGF+ FA+    
Sbjct: 1   MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRND-----------QNIVGRTSGSINVSPGPG---RTR 120
            + +R+ H I G+ V+ ++A+ +++           +  V + +G +      G   RT+
Sbjct: 61  VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120

Query: 121 KIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIK 180
           KIFVGGL+S  TE EFK+YF++FG  TDVVVM+D  T RPRGFGF+TYDSE++VE V+  
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180

Query: 181 TFHELNGKMVEVKRAVPKE 186
            FHEL+ K VEVKRA+PKE
Sbjct: 181 NFHELSDKRVEVKRAIPKE 199

[Close]

BLAST of Carg16091 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-46
Identity = 116/288 (40.28%), Postives = 157/288 (54.51%), Query Frame = 0


Query: 6   GKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIR 65
           GKLFVGG+ W T ++ L+ YFS +GEVV+ VIMKD+TT + RGFGF+ F DP+    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGR-TSGSINVSPGP--GRTRKIFVGGLASTVTESE 125
            + H +DGR ++ K   PR  Q    R   G     P     R+ KIFVGG+     E+E
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129

Query: 126 FKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRA 185
            K YF++FG +T+VV++YD    RPRGFGFIT++ E++V++ +   FH++ GK VEVKRA
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 189

Query: 186 VPKELSPGPSRSPLGGYNYGQSRVNSFLNGYT-------QGYS--------SSTIGGYGV 245
            P++ S   +  P G   +G   + S  NG+T       QGYS          TIGGYG 
Sbjct: 190 EPRD-SKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG- 249

Query: 246 RMDGRFSP----------VSSGRSVFTP---FSSGYGMGVNFEIGLNP 262
           +  GR  P          VS+    F P   F  GY     F  G  P
Sbjct: 250 QPAGRGGPPPPPSFAPFLVSTTPGPFPPPQGFPPGYATPPPFGYGYGP 295

[Close]

BLAST of Carg16091 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.7e-46
Identity = 80/181 (44.20%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 4   DSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADRV 63
           + GK+F+GG++W+T +D L++YF  FGEV++  +M+D TTGR RGFGF+ F +P   + V
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220

Query: 64  IREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFK 123
           + ++H++DG++++ KRA+PR +Q                 +T K+FVGG+    TE EF+
Sbjct: 221 MSKEHHLDGKIIDPKRAIPREEQE----------------KTAKMFVGGVPGDCTEEEFR 280

Query: 124 NYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVP 183
           N+F+QFG + D  +M D +T RPRGFGF+TY++E AVE  + + +  ++GK VEVKRA P
Sbjct: 281 NFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 325

Query: 184 K 185
           K
Sbjct: 341 K 325

[Close]

BLAST of Carg16091 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 112/290 (38.62%), Postives = 154/290 (53.10%), Query Frame = 0


Query: 6   GKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIR 65
           GKLFVGG+ W T ++ L+ YFS +GEVV+ VIMKD+TT + RGFGF+ F DP+    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGP----GRTRKIFVGGLASTVTES 125
            + H +DGR ++ K   PR  Q    RT        GP     ++ KIFVGG+     E+
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQ--PERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 129

Query: 126 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 185
           E + YF +FG +T+VV++YD    RPRGFGFIT++ E++V++ +   FH++ GK VEVKR
Sbjct: 130 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 189

Query: 186 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYT--------QGY--------SSSTIGGY 245
           A P++        P G   +G   V +  NG+         QGY        +   IGGY
Sbjct: 190 AEPRDSKSQAPGQP-GASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGY 249

Query: 246 GVRMDGRFSP----------VSSGRSVFTP---FSSGYGMGVNFEIGLNP 262
           G    GR +P          VS+    F P   F  GYG    F  G  P
Sbjct: 250 GPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

[Close]

BLAST of Carg16091 vs. ExPASy TrEMBL
Match: A0A6J1FV25 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449066 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 6.1e-269
Identity = 476/477 (99.79%), Postives = 476/477 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNS NHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSANHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 477

[Close]

BLAST of Carg16091 vs. ExPASy TrEMBL
Match: A0A6J1JFM3 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483974 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.5e-267
Identity = 476/479 (99.37%), Postives = 476/479 (99.37%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVS--PGPGRTRKIFVGGLASTVT 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVS  PGPGRTRKIFVGGLASTVT
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGPGRTRKIFVGGLASTVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV
Sbjct: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG 240
           KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG
Sbjct: 181 KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG 240

Query: 241 RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG 300
           RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG
Sbjct: 241 RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG 300

Query: 301 NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI 360
           NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI
Sbjct: 301 NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI 360

Query: 361 LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADF 420
           LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPP SSFPTSTVGFDGPFADF
Sbjct: 361 LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPASSFPTSTVGFDGPFADF 420

Query: 421 YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 479

[Close]

BLAST of Carg16091 vs. ExPASy TrEMBL
Match: A0A6J1FX47 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449066 PE=4 SV=1)

HSP 1 Score: 930.2 bits (2403), Expect = 3.3e-267
Identity = 473/474 (99.79%), Postives = 473/474 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNS NHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
Sbjct: 361 QGGGNNVFSNSANHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 475
           ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG
Sbjct: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 474

[Close]

BLAST of Carg16091 vs. ExPASy TrEMBL
Match: A0A1S3CKY6 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103502128 PE=4 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.1e-257
Identity = 456/477 (95.60%), Postives = 467/477 (97.90%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYF+A+G+VVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPF SGYGMGVNF+IGLNPGYGG+SNF NNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSAS GG IGGT FANSGV+WGSSGI S
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSAS-GGSIGGTGFANSGVSWGSSGISS 360

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNSGN NYGG+DSSYS+GAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFY+
Sbjct: 361 QGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYS 420

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 478
           A YGD TWRSSNFERD SGPFGYGLG+AASDVS+RSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 AGYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of Carg16091 vs. ExPASy TrEMBL
Match: A0A5D3CKF6 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00630 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.7e-255
Identity = 453/474 (95.57%), Postives = 464/474 (97.89%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYF+A+G+VVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 29  MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 88

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 89  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 148

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 149 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 208

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
Sbjct: 209 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 268

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPF SGYGMGVNF+IGLNPGYGG+SNF NNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 269 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 328

Query: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS 360
           GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSAS GG IGGT FANSGV+WGSSGI S
Sbjct: 329 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSAS-GGSIGGTGFANSGVSWGSSGISS 388

Query: 361 QGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN 420
           QGGGNNVFSNSGN NYGG+DSSYS+GAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFY+
Sbjct: 389 QGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYS 448

Query: 421 ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 475
           A YGD TWRSSNFERD SGPFGYGLG+AASDVS+RSSPGFIGGHSVNRRQSNRG
Sbjct: 449 AGYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 501

[Close]

BLAST of Carg16091 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 567.8 bits (1462), Expect = 8.4e-162
Identity = 319/499 (63.93%), Postives = 382/499 (76.55%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQ+D+GKLF+GGISWDT+E+RLKEYFS+FGEV+EAVI+KDRTTGR RGFGF+VFADP+VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRT-SGSINVSP-GPGRTRKIFVGGLASTVT 120
           + VI EKHNIDGR+VEAK+AVPR+DQN+V R+ S SI  SP GPGRTRKIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ES+FK YF+QFGT TDVVVMYDHNT RPRGFGFITYDSEEAVEKVL+KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLG-GYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSS 240
           KRAVPKELSPGPSRSPLG GY+YG +RVN+ LNGY QG++ + +GGYG+RMDGRFSPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 GRSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFG-NIGYE 300
           GRS F  +SSGYGM VNF+ GL  G+ G +N+  N++YGRG+SPYY GN++RFG  +GYE
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 SGN-GGNSSFFSSATQNLWGSGG---LNNGTNSANSNAHLGSASVGGGIGGTAFANSGVN 360
            GN GGNSSFFSS T+NLWG+ G    NN   ++NSN ++G +S G       F NSGVN
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WGSSGILSQGGGNNVFSNSG-NHNYGGI-DSSYSIGAGGY-GRNSG-TVLPPTSSF---- 420
           WG     + GGGNN  SN      YGG  +S + +G GGY  RN G     P+SSF    
Sbjct: 361 WG-----APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420

Query: 421 PTSTVGFD-GPFADFY--NASYGDLTWRSSNFERDVSGPFGYGLGNA--ASDVSSR-SSP 478
            T+  G+D    A+FY   A Y D TWRS   E +   PF YG+G    +SDVS+R SSP
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480

[Close]

BLAST of Carg16091 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 567.4 bits (1461), Expect = 1.1e-161
Identity = 318/496 (64.11%), Postives = 381/496 (76.81%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQ+D+GKLF+GGISWDT+E+RLKEYFS+FGEV+EAVI+KDRTTGR RGFGF+VFADP+VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRT-SGSINVSP-GPGRTRKIFVGGLASTVT 120
           + VI EKHNIDGR+VEAK+AVPR+DQN+V R+ S SI  SP GPGRTRKIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ES+FK YF+QFGT TDVVVMYDHNT RPRGFGFITYDSEEAVEKVL+KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLG-GYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSS 240
           KRAVPKELSPGPSRSPLG GY+YG +RVN+ LNGY QG++ + +GGYG+RMDGRFSPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 GRSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFG-NIGYE 300
           GRS F  +SSGYGM VNF+ GL  G+ G +N+  N++YGRG+SPYY GN++RFG  +GYE
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 SGN-GGNSSFFSSATQNLWGSGG---LNNGTNSANSNAHLGSASVGGGIGGTAFANSGVN 360
            GN GGNSSFFSS T+NLWG+ G    NN   ++NSN ++G +S G       F NSGVN
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WGSSGILSQGGGNNVFSNSG-NHNYGGI-DSSYSIGAGGY-GRNSG-TVLPPTSSF---- 420
           WG     + GGGNN  SN      YGG  +S + +G GGY  RN G     P+SSF    
Sbjct: 361 WG-----APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420

Query: 421 PTSTVGFD-GPFADFY--NASYGDLTWRSSNFERDVSGPFGYGLGNA--ASDVSSR-SSP 475
            T+  G+D    A+FY   A Y D TWRS   E +   PF YG+G    +SDVS+R SSP
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480

[Close]

BLAST of Carg16091 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 372.1 bits (954), Expect = 6.8e-103
Identity = 241/498 (48.39%), Postives = 315/498 (63.25%), Query Frame = 0


Query: 3   TDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
           +D GKLF+GGISWDTDE+RL+EYF  +G++VEAVIM+DRTTGR RGFGFIVFADPSVA+R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSIN-VSP------GPGRTRKIFVGGLAS 122
           VI +KH IDGR VEAK+AVPR+DQ ++ R +  ++ +SP      G  RT+KIFVGGL S
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 182
           ++TE+EFKNYFDQFGTI DVVVMYDHNT RPRGFGFIT+DSEE+V+ VL KTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRAVPKEL-SPGPSRSPLGGY--NYG----QSRVNSFLNGYTQGYSSSTIGGYGVRM 242
           VEVKRAVPKEL S  P+RSPL GY  NYG    +S  NS+ N +  GY+++ +G      
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 251

Query: 243 DGRFSPVSSGRSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGR--GLSPYYTGN 302
            GRFSP+ SGR+ F    S +G+G+N E+ LN  + G     N L Y R  G   + + +
Sbjct: 252 AGRFSPIGSGRNAF----SSFGLGLNQELNLNSNFDG-----NTLGYSRIPGNQYFNSAS 311

Query: 303 SDRFGN-IGYESGNGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTA 362
            +R+ + IGY  G+    S ++ + ++LWG     N ++S+    +LG  SVG   G   
Sbjct: 312 PNRYNSPIGYNRGD----SAYNPSNRDLWG-----NRSDSSGPGWNLG-VSVGNNRG--- 371

Query: 363 FANSGVNWGSSGILSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFP 422
                 NWG S ++S            N+ YG    SY  G+G  G           SF 
Sbjct: 372 ------NWGLSSVVSD-----------NNGYG---RSYGAGSGLSG----------LSFA 431

Query: 423 TSTVGFDGPFADFYNAS--YGDLTW-------RSSNFERDVSGPFGYGLGNAASDVSSRS 475
            +T GFDG   + Y  S  Y D TW       +SSN    +S  +G+G+ N  SD S+ +
Sbjct: 432 GNTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANA 452

[Close]

BLAST of Carg16091 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 372.1 bits (954), Expect = 6.8e-103
Identity = 241/498 (48.39%), Postives = 315/498 (63.25%), Query Frame = 0


Query: 3   TDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
           +D GKLF+GGISWDTDE+RL+EYF  +G++VEAVIM+DRTTGR RGFGFIVFADPSVA+R
Sbjct: 9   SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68

Query: 63  VIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSIN-VSP------GPGRTRKIFVGGLAS 122
           VI +KH IDGR VEAK+AVPR+DQ ++ R +  ++ +SP      G  RT+KIFVGGL S
Sbjct: 69  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128

Query: 123 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 182
           ++TE+EFKNYFDQFGTI DVVVMYDHNT RPRGFGFIT+DSEE+V+ VL KTFHELNGKM
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188

Query: 183 VEVKRAVPKEL-SPGPSRSPLGGY--NYG----QSRVNSFLNGYTQGYSSSTIGGYGVRM 242
           VEVKRAVPKEL S  P+RSPL GY  NYG    +S  NS+ N +  GY+++ +G      
Sbjct: 189 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 248

Query: 243 DGRFSPVSSGRSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGR--GLSPYYTGN 302
            GRFSP+ SGR+ F    S +G+G+N E+ LN  + G     N L Y R  G   + + +
Sbjct: 249 AGRFSPIGSGRNAF----SSFGLGLNQELNLNSNFDG-----NTLGYSRIPGNQYFNSAS 308

Query: 303 SDRFGN-IGYESGNGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTA 362
            +R+ + IGY  G+    S ++ + ++LWG     N ++S+    +LG  SVG   G   
Sbjct: 309 PNRYNSPIGYNRGD----SAYNPSNRDLWG-----NRSDSSGPGWNLG-VSVGNNRG--- 368

Query: 363 FANSGVNWGSSGILSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFP 422
                 NWG S ++S            N+ YG    SY  G+G  G           SF 
Sbjct: 369 ------NWGLSSVVSD-----------NNGYG---RSYGAGSGLSG----------LSFA 428

Query: 423 TSTVGFDGPFADFYNAS--YGDLTW-------RSSNFERDVSGPFGYGLGNAASDVSSRS 475
            +T GFDG   + Y  S  Y D TW       +SSN    +S  +G+G+ N  SD S+ +
Sbjct: 429 GNTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANA 449

[Close]

BLAST of Carg16091 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 355.5 bits (911), Expect = 6.5e-98
Identity = 222/477 (46.54%), Postives = 290/477 (60.80%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M+ +S KLF+GGISW+T EDRL++YF +FGEV+EAVIMKDR TGR RGFGF+VFADP+VA
Sbjct: 1   MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           +RV+  KH IDG++VEAK+AVPR+D  +  +++ S+  SPGP  ++KIFVGGLAS+VTE+
Sbjct: 61  ERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEA 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFK YF QFG ITDVVVMYDH T RPRGFGFI+YDSEEAV+KVL KTFHELNGKMVEVK 
Sbjct: 121 EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKL 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240
           AVPK+++    R+ +   ++G SR++S LN YTQG+S S I GYGV+ + R+SP    R 
Sbjct: 181 AVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRG 240

Query: 241 VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
            F+PF  GYG+ +NFE      YG  S+      +GR  SP Y  +  RFG+   ESG  
Sbjct: 241 GFSPFGHGYGIELNFEPNQTQNYGSGSSG----GFGRPFSPGYAASLGRFGS-QMESGGA 300

Query: 301 --GNSSFFSSATQN-LWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSG 360
             GN S  ++A +N LWG+GGL        SN+ +  +S  G  G ++  + G NWG+  
Sbjct: 301 SVGNGSVLNAAPKNHLWGNGGL-----GYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVA 360

Query: 361 ILSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFAD 420
                      S  G     G+++   +  GGY  +SG+ +    S              
Sbjct: 361 RARS-------SYHGERGGVGLEAMRGVHVGGY--SSGSSILEADSL------------- 420

Query: 421 FYNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRG 475
                Y D  W S   + +       GLG    D  SR   G+I       RQ N G
Sbjct: 421 -----YSDSMWLSLPAKAE------EGLGMGPLDFMSRGPAGYI------NRQPNGG 428

The following BLAST results are available for this feature:

BLAST of Carg16091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513357.1	2.5e-269	100.00	heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022944676.1	1.3e-268	99.79	heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita moschata] >XP_02...	[more]
XP_023513360.1	1.4e-267	100.00	heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_022986138.1	3.1e-267	99.37	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >XP_022986139....	[more]
XP_022944679.1	6.9e-267	99.79	heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg16091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	3.2e-65	40.23	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q9C652	3.3e-46	48.24	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]
Q98SJ2	4.3e-46	40.28	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
O94432	9.7e-46	44.20	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
Q96EP5	1.6e-45	38.62	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]

BLAST of Carg16091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV25	6.1e-269	99.79	heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JFM3	1.5e-267	99.37	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FX47	3.3e-267	99.79	heterogeneous nuclear ribonucleoprotein 1 isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A1S3CKY6	3.1e-257	95.60	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350212...	[more]
A0A5D3CKF6	1.7e-255	95.57	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Carg16091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.1	8.4e-162	63.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	1.1e-161	64.11	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	6.8e-103	48.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	6.8e-103	48.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.1	6.5e-98	46.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 1.1E-24 score: 98.0 coord: 107..179 e-value: 7.0E-23 score: 92.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..69 e-value: 4.8E-16 score: 58.3 coord: 108..165 e-value: 7.3E-15 score: 54.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 17.47229
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..183 score: 17.523457
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..88 e-value: 2.8E-27 score: 96.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..189 e-value: 2.3E-25 score: 90.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..477
None	No IPR available	PANTHER	PTHR48032:SF1	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKE	coord: 1..476
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..476
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 1.69029E-36 score: 127.317
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 104..183 e-value: 4.59751E-45 score: 150.209
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 99..204
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16091-RA	Carg16091-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding