Carg16086 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16086
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	translation machinery-associated protein 7
Location	Carg_Chr20: 3187248 .. 3189105 (+)
RNA-Seq Expression	Carg16086
Synteny	Carg16086

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGGCTGCCATTCGTCCGGTTTTGCCTTGATTTCCACCGGCTTCTGCTTCTCATTCTCTCTTTGCTAAAGGTAATCCAATTACTCAGTATTTTTGTTCAGATTTTCTGATTTGTGTTGTGCGGCTGGTCCTGTTCTTACCCGGATTTTCTCGAAACTCAAGCGTTTTTTCTGATAATTGTTTCTGGGGTTGGGGTTATGTGATACGTTGATGCGGTAGGTGTACTCTTCTCTGCGATTGATAAGTATCATGTTTTCGATCAGCTGAGATCGTTGATTTTAGATTATAGATTTCATCTCTTGTACGATTGATCTTTTATGATAATCAGTGAGTTCTTTTTGTTCTTTTAAAATCTTAGACACCCAACAAAAATCTAATGTTTCGAAGGCATGTTATATGAGCACGGATGTTTAGAATTTGCGAATTCTAACTCGTGCAATGCTTTATGGCCTCTATGATAGTTGCCGGTTGTGATACTTTGCGAGCCGTTGATTGCCGCCCACGGGCGTTCCTTCTTTGTGCTATTCGATTCAGGCCAAACCTTATCTTTCCGCCATGTCGTCCAAGCAAGGTACTGTCTATTTCCTTAAGGTTATGGACGATTTGAGCTTTCTGTTTCATTTTCATCATGTATAGGATAGTATCATAGGTCGGATTCGAAGACAACTGCGATGTAATCCTCCTTGATTAAATTGTGACATGGAGAGTCAATTGTGTGGTATGTATGTCTTTATAGGAGGGAAAGCAAAGCCTTTGAAGCAACCCAAGGTTGACAAGAAAGAATATGATGAGGTATGCTTTGATTTTCTTACGTTATGGATCTATGCCGCACGTCTATTTTCTTTTTGAAATATCATTTTGGTCTTTGTACGTCGGGTATCATTCCACTTTTGCCCATGTATTCTCAATAGACGTATTTCAGATGAATAGTAAGTGATTACCTTATACGACGTATTTCAAATGAGAGCGAGCTAGATGTTGTGTAGTAGCCTGCTTCACTCGTGTCGCAATGTGGAGATGAGTGGGTTAGCATTAGAATAGCTATCTAACCTCGAACTTGATGATGGCGGGAACTATGTGATTCTATCGAACATGTACACACAAGGAGGTATATGAGAAGGAATCACAAGGCTAAGAGCTCTCATTATGGATAGAGGGCTAAAGAAAAGCATTGCTTGTAGTTTGATAGAGATGAGAAACAAAGTCCATGCTCCCTTATAGAAGATGCATCTCATTTCGAGTCGATAGTAGGCGACCATGGGCTGCCAATTGGGCAAGTTTTGTAGGGTGTTGAAGATAATGAAAAGGCCGATATGGTATGTAGTCGACTCTCGAGCACATCTGTGTGAACCAGGCCCTCGATACCAAGAACCTTCGAGTTTACGAGGATAGCCATGTTGTTATCAGGGATGTCTATAATTTTGAAACAAAATGATGAAAATATGTGTTTAGTAGTGAGGTAAGTAAGCATTTTTGTGATGAACAGGTTGATCTGGCGAATATCCAGAAGAAGAAGGACGAGGAAAAGGTGAGACACCTTGAACTTAGAGCACGAAACTATCCCACAACTCTCTTGTGGCCCATGGATTGCTATAATTTTGAGTTGTTTTTATGGAATTACAGGCGCTGAGAGAGCTGAAAGCGAAGGCCCAACAGAAGGGGGCCTTTGGAGGTGCTGGGCTGAAGAAGAGTGGGAAGAAATGATGAACTTCCCACGCCATATAATATAATATATTATGAAAACTGAATAATGTAAGAGTCGAATGCTTTCTTCTTCTCTTCTCTTCTCTTCTGTGTAAAAACCTGGAAGACCAGAATGAAATATGAATGAATGATTATTGAAGTTCGAGTGCTTTTC

mRNA sequence

TAGGGCTGCCATTCGTCCGGTTTTGCCTTGATTTCCACCGGCTTCTGCTTCTCATTCTCTCTTTGCTAAAGTTGCCGGTTGTGATACTTTGCGAGCCGTTGATTGCCGCCCACGGGCGTTCCTTCTTTGTGCTATTCGATTCAGGCCAAACCTTATCTTTCCGCCATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTTTGAAGCAACCCAAGGTTGACAAGAAAGAATATGATGAGGCCCTCGATACCAAGAACCTTCGAGTTTACGAGGATAGCCATGTTGTTATCAGGGATGTTGATCTGGCGAATATCCAGAAGAAGAAGGACGAGGAAAAGGCGCTGAGAGAGCTGAAAGCGAAGGCCCAACAGAAGGGGGCCTTTGGAGGTGCTGGGCTGAAGAAGAGTGGGAAGAAATGATGAACTTCCCACGCCATATAATATAATATATTATGAAAACTGAATAATGTAAGAGTCGAATGCTTTCTTCTTCTCTTCTCTTCTCTTCTGTGTAAAAACCTGGAAGACCAGAATGAAATATGAATGAATGATTATTGAAGTTCGAGTGCTTTTC

Coding sequence (CDS)

ATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTTTGAAGCAACCCAAGGTTGACAAGAAAGAATATGATGAGGCCCTCGATACCAAGAACCTTCGAGTTTACGAGGATAGCCATGTTGTTATCAGGGATGTTGATCTGGCGAATATCCAGAAGAAGAAGGACGAGGAAAAGGCGCTGAGAGAGCTGAAAGCGAAGGCCCAACAGAAGGGGGCCTTTGGAGGTGCTGGGCTGAAGAAGAGTGGGAAGAAATGA

Protein sequence

MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALRELKAKAQQKGAFGGAGLKKSGKK

Homology

[Close]

BLAST of Carg16086 vs. NCBI nr
Match: KAG7010765.1 (hypothetical protein SDJN02_27561 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKGAFGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGAFGGAGLKKSGKK 83

[Close]

BLAST of Carg16086 vs. NCBI nr
Match: XP_022943547.1 (translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] >XP_022943548.1 translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] >XP_022986413.1 translation machinery-associated protein 7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-19
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VDLAN+QKKKDEEKALR
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDLANMQKKKDEEKALR 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKGAFGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGAFGGAGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. NCBI nr
Match: XP_023512250.1 (LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 63/83 (75.90%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
           MSSKQGGKAKPLKQPKVDKKEYDE                   VDLAN QKKKDEEKALR
Sbjct: 40  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDLANKQKKKDEEKALR 99

Query: 61  ELKAKAQQKGAFGGAGLKKSGKK 84
           ELKAKAQQKGAFGGAGLKKSGKK
Sbjct: 100 ELKAKAQQKGAFGGAGLKKSGKK 103

[Close]

BLAST of Carg16086 vs. NCBI nr
Match: XP_022145738.1 (translation machinery-associated protein 7 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 61/83 (73.49%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VD+ANIQKKKDEEKALR
Sbjct: 35 MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDMANIQKKKDEEKALR 94

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          EL+AKAQQKG FGGAGLKKSGKK
Sbjct: 95 ELRAKAQQKGTFGGAGLKKSGKK 98

[Close]

BLAST of Carg16086 vs. NCBI nr
Match: PON86399.1 (Translation machinery associated TMA [Trema orientale])

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18
Identity = 60/83 (72.29%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VD+ANIQKKK+EEKAL+
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDMANIQKKKEEEKALK 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKG+FGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGSFGGAGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy Swiss-Prot
Match: A1A4Q4 (Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-07
Identity = 39/83 (46.99%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MS ++GGK KPLKQPK   KE DE                    D A  QK+K+E+K L 
Sbjct: 1  MSGREGGKKKPLKQPKKQAKEMDEE-------------------DKAFKQKQKEEQKKLE 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKA  KG     G+KKSGKK
Sbjct: 61 ELKAKAAGKGPLATGGIKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy Swiss-Prot
Match: Q9Y2S6 (Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-07
Identity = 39/83 (46.99%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MS ++GGK KPLKQPK   KE DE                    D A  QK+K+E+K L 
Sbjct: 1  MSGREGGKKKPLKQPKKQAKEMDEE-------------------DKAFKQKQKEEQKKLE 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKA  KG     G+KKSGKK
Sbjct: 61 ELKAKAAGKGPLATGGIKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy Swiss-Prot
Match: Q8K003 (Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-07
Identity = 39/83 (46.99%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MS ++GGK KPLKQPK   KE DE                    D A  QK+K+E+K L 
Sbjct: 1  MSGREGGKKKPLKQPKKQAKEMDEE-------------------DKAFKQKQKEEQKKLE 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKA  KG     G+KKSGKK
Sbjct: 61 ELKAKAAGKGPLATGGIKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy Swiss-Prot
Match: Q4SUE2 (Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN=tma7 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-07
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MS ++GGK KPLK PK   K+ D                   D D+A  QK+K+++KA+ 
Sbjct: 1  MSGREGGKKKPLKAPKKQSKDMD-------------------DDDVAFKQKQKEDQKAME 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
           LKA+A  KG  GG+G+KKSGKK
Sbjct: 61 ALKARASGKGPLGGSGIKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy Swiss-Prot
Match: Q28GR1 (Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-07
Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MS ++GGK KPLKQPK   K+ DE                    ++A  QK+K+++K L 
Sbjct: 1  MSGREGGKKKPLKQPKKSNKDMDED-------------------EIAFKQKQKEDQKKLD 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          E+K KA QKG   G G+KKSGKK
Sbjct: 61 EMKGKAAQKGPLTGGGIKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy TrEMBL
Match: A0A6J1FTB5 (translation machinery-associated protein 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448285 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VDLAN+QKKKDEEKALR
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDLANMQKKKDEEKALR 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKGAFGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGAFGGAGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy TrEMBL
Match: A0A6J1JGF3 (translation machinery-associated protein 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484156 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VDLAN+QKKKDEEKALR
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDLANMQKKKDEEKALR 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKGAFGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGAFGGAGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. ExPASy TrEMBL
Match: A0A6J1CWS4 (translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC111015118 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.0e-19
Identity = 61/83 (73.49%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VD+ANIQKKKDEEKALR
Sbjct: 35 MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDMANIQKKKDEEKALR 94

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          EL+AKAQQKG FGGAGLKKSGKK
Sbjct: 95 ELRAKAQQKGTFGGAGLKKSGKK 98

[Close]

BLAST of Carg16086 vs. ExPASy TrEMBL
Match: A0A6J1IRF0 (translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111479817 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18
Identity = 60/83 (72.29%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
           MSSKQGGKAKPLKQPKV+KK+YDE                   VD+ANIQKKKDEEKALR
Sbjct: 38  MSSKQGGKAKPLKQPKVEKKDYDE-------------------VDMANIQKKKDEEKALR 97

Query: 61  ELKAKAQQKGAFGGAGLKKSGKK 84
           EL+AKAQQKGAFGGAGLKKSGKK
Sbjct: 98  ELRAKAQQKGAFGGAGLKKSGKK 101

[Close]

BLAST of Carg16086 vs. ExPASy TrEMBL
Match: A0A2P5ELN0 (Translation machinery associated TMA OS=Trema orientale OX=63057 GN=TorRG33x02_177400 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18
Identity = 60/83 (72.29%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPKVDKKEYDE                   VD+ANIQKKK+EEKAL+
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDE-------------------VDMANIQKKKEEEKALK 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          ELKAKAQQKG+FGGAGLKKSGKK
Sbjct: 61 ELKAKAQQKGSFGGAGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. TAIR 10
Match: AT1G15270.1 (Translation machinery associated TMA7 )

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-20
Identity = 57/83 (68.67%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGKAKPLKQPK DKKEYDE                    DLANIQKKKDEEKAL+
Sbjct: 1  MSSKQGGKAKPLKQPKADKKEYDE-------------------TDLANIQKKKDEEKALK 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          EL+AKA QKG+FGG+GLKKSGKK
Sbjct: 61 ELRAKASQKGSFGGSGLKKSGKK 64

[Close]

BLAST of Carg16086 vs. TAIR 10
Match: AT3G16040.1 (Translation machinery associated TMA7 )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 51/83 (61.45%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKEYDEALDTKNLRVYEDSHVVIRDVDLANIQKKKDEEKALR 60
          MSSKQGGK KPLKQPK  KKEYDE                    D+  +QKKKDEEKAL+
Sbjct: 1  MSSKQGGKLKPLKQPKSGKKEYDEH-------------------DMELMQKKKDEEKALK 60

Query: 61 ELKAKAQQKGAFGGAGLKKSGKK 84
          EL+AKA QKG+FGG+GLKKSGKK
Sbjct: 61 ELRAKASQKGSFGGSGLKKSGKK 64

The following BLAST results are available for this feature:

BLAST of Carg16086 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010765.1	7.1e-34	100.00	hypothetical protein SDJN02_27561 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943547.1	3.8e-19	75.90	translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] ...	[more]
XP_023512250.1	1.1e-18	75.90	LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita ...	[more]
XP_022145738.1	1.9e-18	73.49	translation machinery-associated protein 7 [Momordica charantia]	[more]
PON86399.1	4.2e-18	72.29	Translation machinery associated TMA [Trema orientale]	[more]

BLAST of Carg16086 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1A4Q4	5.8e-07	46.99	Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV...	[more]
Q9Y2S6	5.8e-07	46.99	Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 ...	[more]
Q8K003	5.8e-07	46.99	Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3...	[more]
Q4SUE2	5.8e-07	43.37	Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN...	[more]
Q28GR1	7.6e-07	43.37	Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7...	[more]

BLAST of Carg16086 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTB5	1.8e-19	75.90	translation machinery-associated protein 7-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1JGF3	1.8e-19	75.90	translation machinery-associated protein 7-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1CWS4	9.0e-19	73.49	translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IRF0	2.0e-18	72.29	translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A2P5ELN0	2.0e-18	72.29	Translation machinery associated TMA OS=Trema orientale OX=63057 GN=TorRG33x02_1...	[more]

BLAST of Carg16086 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15270.1	1.2e-20	68.67	Translation machinery associated TMA7	[more]
AT3G16040.1	1.4e-16	61.45	Translation machinery associated TMA7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR28632:SF8	BNAA06G09940D PROTEIN	coord: 37..83 coord: 1..31
IPR015157	Translation machinery associated TMA7	PFAM	PF09072	TMA7	coord: 3..24 e-value: 3.2E-6 score: 27.9 coord: 42..83 e-value: 1.2E-11 score: 45.3
IPR015157	Translation machinery associated TMA7	PANTHER	PTHR28632	TRANSLATION MACHINERY-ASSOCIATED PROTEIN 7	coord: 37..83 coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16086-RA	Carg16086-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation