Carg16040 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16040
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1195)
Location	Carg_Chr07: 2203173 .. 2206467 (-)
RNA-Seq Expression	Carg16040
Synteny	Carg16040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTCTCTTTTCAGTGAGAGAAGAAATCTCTTCTCCGTCCAAATCTGGGTGTATCTTCGATGTGTAGTGCAGAAGAACGAGGGCATGATTTCTCGTTTGTTCTAGAATCGATTCTCCAGCAGTGAGTCTAGGCTTTTGATTTTTGTTTCTCCTTCTCATTGTCGTTGATCGATATGAAGGACGACGATGTCCTTCCGACGACGATAGCGAGTGCCGGGAGGAAAGAGAGCTCGGTTTCGAGTTTATTCGGTAAATGCCGTTACAAGTTCTGGGCATTGGCTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGTACTGTCTCTCTTCGATGGTCCGCTGGTAATCTCAACGGCCTGTCTGATAATATCGATTTTAACATCCATGACGATCTCGATGTGCTTGTTAGTGTCTCTCATTCTCTCTCGCTCTCTCCGTGTATCTATTCGTGATTTTTGAGCTAGATCTTGATGGAATTTTAACTCATCGATTTCATGGTTTTTCCCACAATTGTTGGCTTCCAATTTTAGGAGATGGAGGAAAGGGAGAAGACAGTGAAGCACATGTGGGACGTTTACACAAATAATCACCGTATCAGGTTACCGCGTTTCTGGCTAGAGGCATTCGAGGCTGCGTACGAGGACCTAACCAGTGAAGTGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCCGTGCGCTCCATTGTTATTGATACGCCTTCAAAGAAATCAACGGTTGGTTATTTACTCTCTCATGCTTAAGTTTTAATATCTCCTGATTATCATCTTATGTTCTTAGCTCACGAAAACGGCATCTAAGGGCATTCTATGGACTATAATTACAAACCAGGAGCAGTTGGAGTTTAGTTTTTTTTCTCACTCCTAAGTCTGAATGTTGCAATTATAATAATCATTAGGTGGGAAGTTATCTTAAAACAAAATGCTAATGGTATAGCCTCTGCCTCCCCACCTACCCACTTTAACGTAGGTTTTATTCTTCATAGTTGAACTGAAATTGCACTTTGTTATTTGATGAATGGGATTCTTCATAGAAAAACGAGTCAATTACTATGAACTGCAACCCTGTGTTTCCATTGGATGAATGGCATCCTGTTCTTGACTCTTGATATCGTTGCCTATTCAGAAACTTGACAATTTGTATGACTCCTTAGTCGTTTTAAATAATTTTCTCAAACATTATCAGTGAAGTTGGGGTTCTTTACTGGAAGCTTGCTATATTGTCTGCCAAGCCAGTCACTTCATGTGATTTACAAGGGACCAAAGGTTAACTTGTCAGAGTCTTGTAACAGTTTTTACCTGCTTTCTAATTTCCGTTCATAACCACTTGTGGATGATGGGTTGCCACTTAATTGTCATACTCGTTATAGCTGCCTTTGATAAAGAACCATATTTGTCTCAAATAGGAAACTGCATGTGAGATCTCACGTCGGTTGTAAAGGAGATCGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAATTGTAAGGTTAACAGGGATACATAAGGGGCCAAAGTAGACAATATCTACTAGCGGTGGGCTTGGGCTGTTACAAATTGTATCAGAGCCAGACACCGTGCTACCAGTGAGGATGCTGGGCTCTCAAGGGGGTGGATTGTGAGATCTCACCTCGGTTGTAGAAGAGAACGAAACATTCCTTATAAAGGTATGGAAACCTCTCCCTAACAGACGCGGTTTAAAATCGTGAGGCTAACGGGGATACATAACGGACTAAAGCGGACAATATCTACTAGTGGTGGGCTTGAGCCGTTACACTTCAAGTTTATTATTCAATGATCACTAGCTTACAAGGACAGTGAGGTTTGTTATTACCTGCTTGCAAAACTGTTTCTAAGTTTTGGAATAGTTTTAACCTGCTAGCTAATACCTCCCTCCACAATCAATTGTGGATGGTGGGTTGCCTCTTAATTGTCATCCTCGCTATACTGCCTGCGGTAAAGAATTACAGCCCTGTCTCAAATAGGAAACTACGGTCTCAAACAGGAAACTGCAAGTTTGTTGTTCAGTTATCACTAGTTTATAAGGGTAGCGAGGTTTGTTGTCTTCTACACTCCCTGCAGCCTGAGATCAAGTTCTTCATTCTATTCTGCAAAATATAGTACTTTTATATGGATATGGTTATGGTGGTTTACAAAAGCCGAGGTTATCTTTTCCTCAAACACAGCTGCCTGATAAAGAATTATTGAAGTTCCGGATAAAGAATTATAGTAATCTCAAATAGCAAAAATAGAGTTTGTTCTTCAATGATCACAAGCTTTAAGGACAGGGAGGTTTGTTATCCTCAAAAAGATCAAGCTCTTTTGTCTATTATGAAAATAGAGAACTGCTTATAGAGGTGCTATCTGGCGATTTGTAGAAGTGGAGGTTACCTTGTACTTGGGACAGATTTTTGTTTATGAATCCGTTATTCTTAAAGAAAAAACAACTTTTATTCTTTAAAATAGTTGATTATGAGAACAGACTAAGAGGGAGAGAAAAAAAAAACTTTAAAGAACAAGTTATACAACAAGCATTCACTGCTCCTTTTTGTTCCCAAAACTAACAATTTAAACTCTTATGTGTACTTAATGCATTGGCTTTGTTTATGATCGATGGGAGAACTTGACTCCCACGTTGAATAGACTGCAAACCAATAAAGGGAATCCTGCTTCTGATCTAATCTTGTGTTTTGATAGAAATGATTAACTAATGAACGTCCTTCTAGGAGGGGAGGAAATTTATTAATTCTTATTGATAGTAATTTACTATAGTGAAATGCAGACATATTGGTAGATATGATCTTTCACTGATAGTGCTAAGCATATCCTTCAATTTCATTGTAAAAGCTATTGCTATAGCAAGTGGTATCCCATATGTCACATATTCTTACACATGCAGACATGACAATGTACTCTAACCTCTATTCTCTGTACTCTTCTTATATTCTCTTCTTATATTTATTATCAGAGTGCACGAGAATTCGCAAAGATGCAAAGAAAAGCAGATAAAAGCAGGGAGACCAGCTACCAAAACTGGGAGTAAGCTGTGAGATGGATGATGTTCATGATGATCTAAGGTTCGAGACCTCTCTATTCTGCCCTTTCAGCCACTAGATTGCTGTCTGAAGTTTGTTAGGAGGCAGTGATTGGCAAATCTATATTCTTTAAAATTTGATTCTTCCCCTTTGCTTTAGTATTGCAAGATGGGTCAAACAGCGTTTTTGCCTAGAATGTTATAGTG

mRNA sequence

TTTCTCTCTCTTTTCAGTGAGAGAAGAAATCTCTTCTCCGTCCAAATCTGGGTGTATCTTCGATGTGTAGTGCAGAAGAACGAGGGCATGATTTCTCGTTTGTTCTAGAATCGATTCTCCAGCAGTGAGTCTAGGCTTTTGATTTTTGTTTCTCCTTCTCATTGTCGTTGATCGATATGAAGGACGACGATGTCCTTCCGACGACGATAGCGAGTGCCGGGAGGAAAGAGAGCTCGGTTTCGAGTTTATTCGGTAAATGCCGTTACAAGTTCTGGGCATTGGCTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGTACTGTCTCTCTTCGATGGTCCGCTGGTAATCTCAACGGCCTGTCTGATAATATCGATTTTAACATCCATGACGATCTCGATGTGCTTGAGATGGAGGAAAGGGAGAAGACAGTGAAGCACATGTGGGACGTTTACACAAATAATCACCGTATCAGGTTACCGCGTTTCTGGCTAGAGGCATTCGAGGCTGCGTACGAGGACCTAACCAGTGAAGTGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCCGTGCGCTCCATTGTTATTGATACGCCTTCAAAGAAATCAACGAGTGCACGAGAATTCGCAAAGATGCAAAGAAAAGCAGATAAAAGCAGGGAGACCAGCTACCAAAACTGGGAGTAAGCTGTGAGATGGATGATGTTCATGATGATCTAAGGTTCGAGACCTCTCTATTCTGCCCTTTCAGCCACTAGATTGCTGTCTGAAGTTTGTTAGGAGGCAGTGATTGGCAAATCTATATTCTTTAAAATTTGATTCTTCCCCTTTGCTTTAGTATTGCAAGATGGGTCAAACAGCGTTTTTGCCTAGAATGTTATAGTG

Coding sequence (CDS)

ATGAAGGACGACGATGTCCTTCCGACGACGATAGCGAGTGCCGGGAGGAAAGAGAGCTCGGTTTCGAGTTTATTCGGTAAATGCCGTTACAAGTTCTGGGCATTGGCTGCCATTTTGTTGCTCGCATTTTGGTCCATGTTCACCGGTACTGTCTCTCTTCGATGGTCCGCTGGTAATCTCAACGGCCTGTCTGATAATATCGATTTTAACATCCATGACGATCTCGATGTGCTTGAGATGGAGGAAAGGGAGAAGACAGTGAAGCACATGTGGGACGTTTACACAAATAATCACCGTATCAGGTTACCGCGTTTCTGGCTAGAGGCATTCGAGGCTGCGTACGAGGACCTAACCAGTGAAGTGCCTGGTGATAGAGAGGCTGCTATCTCCGAGATCGCCCGGATGTCCGTGCGCTCCATTGTTATTGATACGCCTTCAAAGAAATCAACGAGTGCACGAGAATTCGCAAAGATGCAAAGAAAAGCAGATAAAAGCAGGGAGACCAGCTACCAAAACTGGGAGTAA

Protein sequence

MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSEVPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE

Homology

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BLAST of Carg16040 vs. NCBI nr
Match: KAG6594834.1 (hypothetical protein SDJN03_11387, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026798.1 hypothetical protein SDJN02_10805 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.4 bits (882), Expect = 5.9e-91
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE
Sbjct: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 175
           VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE
Sbjct: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 174

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BLAST of Carg16040 vs. NCBI nr
Match: XP_022963349.1 (uncharacterized protein LOC111463582 [Cucurbita moschata] >XP_023517026.1 uncharacterized protein LOC111780908 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE
Sbjct: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 175
           VPGDREAAISEIARMSVRSIVIDTPS+KSTSAREFAKMQRKADKSRETSYQNWE
Sbjct: 121 VPGDREAAISEIARMSVRSIVIDTPSEKSTSAREFAKMQRKADKSRETSYQNWE 174

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BLAST of Carg16040 vs. NCBI nr
Match: XP_023002970.1 (uncharacterized protein LOC111496718 [Cucurbita maxima])

HSP 1 Score: 335.9 bits (860), Expect = 2.1e-88
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           N LSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLP FWLEAFEAAYEDLTSE
Sbjct: 61  NSLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPSFWLEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 175
           VPGDREAAISEIARMSVRSIVIDTP++KSTSAREFAKMQRKADKSRETSYQNWE
Sbjct: 121 VPGDREAAISEIARMSVRSIVIDTPAEKSTSAREFAKMQRKADKSRETSYQNWE 174

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BLAST of Carg16040 vs. NCBI nr
Match: XP_038883913.1 (uncharacterized protein LOC120074752 [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 153/169 (90.53%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGK RYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSD+IDFNIHDDLDVLEMEEREK VKHMWDVYTNN RIRLPRFW EAFEAAYEDLTSE
Sbjct: 61  NGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETS 170
           VPGDREAAISEIARMSV SIV+DTPS++ST+AREF K Q+ ADKSRET+
Sbjct: 121 VPGDREAAISEIARMSVHSIVLDTPSEQSTTAREFTKRQKIADKSRETA 169

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BLAST of Carg16040 vs. NCBI nr
Match: XP_011658007.1 (uncharacterized protein LOC101216891 [Cucumis sativus] >KGN48820.1 hypothetical protein Csa_003173 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 6.3e-77
Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGK RYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSD+IDF+IHDDLDVLEMEEREK VKHMWDVYTNN RIRLPRFW EAFEAAYEDLTSE
Sbjct: 61  NGLSDDIDFSIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNW 174
           VPGDREAAISEIARMSV S+V+DTPS +ST+AREF K Q+ ADKSR+ + + W
Sbjct: 121 VPGDREAAISEIARMSVHSVVLDTPSDQSTAAREFTKRQKIADKSRQAATKTW 173

[Close]

BLAST of Carg16040 vs. ExPASy TrEMBL
Match: A0A6J1HJU4 (uncharacterized protein LOC111463582 OS=Cucurbita moschata OX=3662 GN=LOC111463582 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.3e-91
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE
Sbjct: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 175
           VPGDREAAISEIARMSVRSIVIDTPS+KSTSAREFAKMQRKADKSRETSYQNWE
Sbjct: 121 VPGDREAAISEIARMSVRSIVIDTPSEKSTSAREFAKMQRKADKSRETSYQNWE 174

[Close]

BLAST of Carg16040 vs. ExPASy TrEMBL
Match: A0A6J1KQG7 (uncharacterized protein LOC111496718 OS=Cucurbita maxima OX=3661 GN=LOC111496718 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           N LSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLP FWLEAFEAAYEDLTSE
Sbjct: 61  NSLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPSFWLEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNWE 175
           VPGDREAAISEIARMSVRSIVIDTP++KSTSAREFAKMQRKADKSRETSYQNWE
Sbjct: 121 VPGDREAAISEIARMSVRSIVIDTPAEKSTSAREFAKMQRKADKSRETSYQNWE 174

[Close]

BLAST of Carg16040 vs. ExPASy TrEMBL
Match: A0A0A0KGF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502580 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.1e-77
Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGK RYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSD+IDF+IHDDLDVLEMEEREK VKHMWDVYTNN RIRLPRFW EAFEAAYEDLTSE
Sbjct: 61  NGLSDDIDFSIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETSYQNW 174
           VPGDREAAISEIARMSV S+V+DTPS +ST+AREF K Q+ ADKSR+ + + W
Sbjct: 121 VPGDREAAISEIARMSVHSVVLDTPSDQSTAAREFTKRQKIADKSRQAATKTW 173

[Close]

BLAST of Carg16040 vs. ExPASy TrEMBL
Match: A0A1S3B2C0 (uncharacterized protein LOC103485038 OS=Cucumis melo OX=3656 GN=LOC103485038 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 150/169 (88.76%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGK RYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSD+IDFNIHDDLDVLEMEEREK VKHMWDVYTNN RIRLPRFW EAFEAAYEDLTSE
Sbjct: 61  NGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETS 170
           VPGDREAAISEIARMSV S+V+DTPS +ST+AREF K Q+ ADKSR+ +
Sbjct: 121 VPGDREAAISEIARMSVHSVVLDTPSDQSTAAREFTKRQKIADKSRQAA 169

[Close]

BLAST of Carg16040 vs. ExPASy TrEMBL
Match: A0A6J1BS47 (uncharacterized protein LOC111005257 OS=Momordica charantia OX=3673 GN=LOC111005257 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 150/169 (88.76%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MKDDDVLPTTIASAGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60
           MKDDDVLPTTIASAG+KESSVSSLFGK RYKFWALAAILLLAFWSMFTGTVSLRWSAGNL
Sbjct: 1   MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNL 60

Query: 61  NGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAYEDLTSE 120
           NGLSD +DFNI+DDLDVLEMEEREK VKHMWDVYTNN RIRLPRFW EAFEAAYEDLTSE
Sbjct: 61  NGLSDGVDFNINDDLDVLEMEEREKVVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSE 120

Query: 121 VPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRETS 170
           VPGDREAAISEIARMSV SIVID  S++STSAR F KMQ+ ADK+RET+
Sbjct: 121 VPGDREAAISEIARMSVHSIVIDATSEQSTSARGFVKMQKIADKNRETA 169

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BLAST of Carg16040 vs. TAIR 10
Match: AT5G65650.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-58
Identity = 118/174 (67.82%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MKDDDVLPTTIAS------AGRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTVSLR 60
           MKD D LP + +S       G+KE+  S+LF K RYKFWALAAILLLAFWSM TGTV+LR
Sbjct: 1   MKDGDSLPISTSSVAATTVTGKKETGYSALFSKGRYKFWALAAILLLAFWSMLTGTVNLR 60

Query: 61  WSAGNLNGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFEAAY 120
           WSAGN+N  +D++ F IH+DLDVLEMEEREK VKHMWDVY N  RIRLPRFW EAFEAAY
Sbjct: 61  WSAGNINHFTDDLVFPIHEDLDVLEMEEREKVVKHMWDVYNNGRRIRLPRFWQEAFEAAY 120

Query: 121 EDLTSEVPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAKMQRKADKSRET 169
           E+LTS+VP   EAAISEIARMS+RSIVID P   ST+ RE  K  + ADK R T
Sbjct: 121 EELTSDVPDVVEAAISEIARMSIRSIVIDPPPLHSTNVRELTKTLKLADKGRAT 174

[Close]

BLAST of Carg16040 vs. TAIR 10
Match: AT4G36660.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 207.6 bits (527), Expect = 8.0e-54
Identity = 108/166 (65.06%), Postives = 127/166 (76.51%), Query Frame = 0


Query: 1   MKDDDVLPTTIASA---------GRKESSVSSLFGKCRYKFWALAAILLLAFWSMFTGTV 60
           MK+DD LPTT  +           +KESS S LFG+ RYKFWA AAILLLAFWSMFTGTV
Sbjct: 1   MKEDDALPTTTTTGTATGTAMANSKKESSDSVLFGRGRYKFWAFAAILLLAFWSMFTGTV 60

Query: 61  SLRWSAGNLNGLSDNIDFNIHDDLDVLEMEEREKTVKHMWDVYTNNHRIRLPRFWLEAFE 120
           +LR S GNLN LS+++    +D+LDVLEMEEREK VKHMWDVYTN+ RI+LPRFW EAF 
Sbjct: 61  TLRLSTGNLNRLSEDLGIPNYDNLDVLEMEEREKVVKHMWDVYTNSRRIKLPRFWQEAFV 120

Query: 121 AAYEDLTSEVPGDREAAISEIARMSVRSIVIDTPSKKSTSAREFAK 158
           AAYE+LTS+VPG REAAI EIA+MS RSI +D P  +S SAR+  +
Sbjct: 121 AAYEELTSDVPGVREAAIGEIAKMSARSITLDPPPSRSMSARDLGR 166

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BLAST of Carg16040 vs. TAIR 10
Match: AT1G19380.1 (Protein of unknown function (DUF1195) )

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 30  YKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDNIDFNIHDDLDVLEMEEREKTVKH 89
           YK W L A+LLLAF SM TG+VSL+   G  +       F+  DDLDVLE+EEREK V+ 
Sbjct: 25  YKLWVLIAVLLLAFGSMLTGSVSLK-GIGLFHSADGVNAFSFGDDLDVLEIEEREKVVRQ 84

Query: 90  MWDVYTNNHRIRLPRFWLEAFEAAYEDLTSEVPGDREAAISEIARMSVRSIVIDTPSKKS 149
           MWDVY  +  +++PRFW EAFEAAYE L S+    R AA+S+IA++S+   V      +S
Sbjct: 85  MWDVYGRSGGVKVPRFWREAFEAAYEFLISDSAAVRNAAVSDIAKLSLVRFV----KSES 143

Query: 150 TSAR 154
           TSA+
Sbjct: 145 TSAQ 143

The following BLAST results are available for this feature:

BLAST of Carg16040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594834.1	5.9e-91	100.00	hypothetical protein SDJN03_11387, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963349.1	1.7e-90	99.43	uncharacterized protein LOC111463582 [Cucurbita moschata] >XP_023517026.1 unchar...	[more]
XP_023002970.1	2.1e-88	97.13	uncharacterized protein LOC111496718 [Cucurbita maxima]	[more]
XP_038883913.1	1.3e-77	90.53	uncharacterized protein LOC120074752 [Benincasa hispida]	[more]
XP_011658007.1	6.3e-77	86.71	uncharacterized protein LOC101216891 [Cucumis sativus] >KGN48820.1 hypothetical ...	[more]

BLAST of Carg16040 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJU4	8.3e-91	99.43	uncharacterized protein LOC111463582 OS=Cucurbita moschata OX=3662 GN=LOC1114635...	[more]
A0A6J1KQG7	1.0e-88	97.13	uncharacterized protein LOC111496718 OS=Cucurbita maxima OX=3661 GN=LOC111496718...	[more]
A0A0A0KGF8	3.1e-77	86.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502580 PE=4 SV=1	[more]
A0A1S3B2C0	1.2e-76	88.76	uncharacterized protein LOC103485038 OS=Cucumis melo OX=3656 GN=LOC103485038 PE=...	[more]
A0A6J1BS47	1.3e-75	88.76	uncharacterized protein LOC111005257 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of Carg16040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65650.1	1.4e-58	67.82	Protein of unknown function (DUF1195)	[more]
AT4G36660.1	8.0e-54	65.06	Protein of unknown function (DUF1195)	[more]
AT1G19380.1	3.0e-24	50.81	Protein of unknown function (DUF1195)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010608	Protein of unknown function DUF1195	PFAM	PF06708	DUF1195	coord: 12..146 e-value: 1.2E-70 score: 235.9
IPR010608	Protein of unknown function DUF1195	PANTHER	PTHR34358	OS03G0411600 PROTEIN	coord: 1..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..168
None	No IPR available	PANTHER	PTHR34358:SF2	OS03G0411600 PROTEIN	coord: 1..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16040-RA	Carg16040-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport
cellular_component	GO:0016021	integral component of membrane