Carg16010 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16010
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein TAPETUM DETERMINANT 1-like
Location	Carg_Chr07: 2357049 .. 2357510 (-)
RNA-Seq Expression	Carg16010
Synteny	Carg16010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTTCCTCAAGCTTTTCGCTGCCCTTCTCTTCGTTTCTCTCCTTTACAAAGGTATAAATTTCAATTTCCAAGTCCATTTTGTTCTTTTATTTATTTATTTATTTAAATTTCTATATTAAATATATATATATATATATATTTTAGGAAATTGCCAATGTGTTTCGAATGACATAGCAATCAGTCAAAAGATGACTGGATTTCAGATTCATGGAATGACAGAATGGAACGTGACAATAAGCAACAACTGTTTGTGTTCTCAGTCTGAAGTGAAGCTTGACTGTAAAGGATTTCAAACTACAAAAAGTATCGATCCCTCAATATTAGCCGTTACTGATACCGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCGAACCCCGTCATCTTCACTTATGCACAAGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATCGCTTGTTCTTAA

mRNA sequence

ATGGCTCCCTTCCTCAAGCTTTTCGCTGCCCTTCTCTTCGTTTCTCTCCTTTACAAAGGAAATTGCCAATGTGTTTCGAATGACATAGCAATCAGTCAAAAGATGACTGGATTTCAGATTCATGGAATGACAGAATGGAACGTGACAATAAGCAACAACTGTTTGTGTTCTCAGTCTGAAGTGAAGCTTGACTGTAAAGGATTTCAAACTACAAAAAGTATCGATCCCTCAATATTAGCCGTTACTGATACCGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCGAACCCCGTCATCTTCACTTATGCACAAGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATCGCTTGTTCTTAA

Coding sequence (CDS)

ATGGCTCCCTTCCTCAAGCTTTTCGCTGCCCTTCTCTTCGTTTCTCTCCTTTACAAAGGAAATTGCCAATGTGTTTCGAATGACATAGCAATCAGTCAAAAGATGACTGGATTTCAGATTCATGGAATGACAGAATGGAACGTGACAATAAGCAACAACTGTTTGTGTTCTCAGTCTGAAGTGAAGCTTGACTGTAAAGGATTTCAAACTACAAAAAGTATCGATCCCTCAATATTAGCCGTTACTGATACCGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCGAACCCCGTCATCTTCACTTATGCACAAGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATCGCTTGTTCTTAA

Protein sequence

MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSEVKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIACS

Homology

[Close]

BLAST of Carg16010 vs. NCBI nr
Match: KAG7026828.1 (Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.5 bits (641), Expect = 3.7e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE
Sbjct: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA
Sbjct: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. NCBI nr
Match: XP_023518832.1 (uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 115/122 (94.26%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAPF  LFAALLFVSLL KGN QCV NDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE
Sbjct: 1   MAPFANLFAALLFVSLLCKGNFQCVPNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDC+GFQTTKS+DPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA
Sbjct: 61  VKLDCRGFQTTKSVDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. NCBI nr
Match: XP_023004032.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAPF KLFAALLFVSLL+KGNCQCVSNDIAI Q M+GFQIHGMTEWNVTISN CLCSQSE
Sbjct: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDC+GFQTTKSIDPS+LAVTD+ECLVNNGLPIFKSN + FTYA DPKFDFKLISSQI 
Sbjct: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. NCBI nr
Match: XP_038881121.1 (uncharacterized protein At1g05835-like [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 5.7e-48
Identity = 95/122 (77.87%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MA F+KL  ALL +SL+  GNCQC+ N+I ISQ+MTGFQIHGMTEW VTISNNC CSQSE
Sbjct: 1   MAIFVKLVTALLVLSLVSTGNCQCILNNITISQRMTGFQIHGMTEWKVTISNNCPCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VK+DCKGFQTT+SIDPSILAV DTECLVNNGLPIF SNP+ F+YAQDP+F+FK ISSQI+
Sbjct: 61  VKIDCKGFQTTESIDPSILAVFDTECLVNNGLPIFNSNPITFSYAQDPQFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. NCBI nr
Match: XP_022962948.1 (uncharacterized protein At1g05835-like [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 7.4e-48
Identity = 96/122 (78.69%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAP  KLFAALLFVS L K N QC  ++I I Q MTGFQIHGMTEWN T+SNNCLCSQSE
Sbjct: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDC+GFQTTKSIDP ILA+TDTECLVNNGLPIF S P+ FTYAQ+P+F+FK ISSQIA
Sbjct: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-04
Identity = 31/116 (26.72%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 10  ALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNC-LCSQSEVKLDCKGF 69
           ALL + +     C+  S++ A+ Q  T  +     ++ V + N C +C    ++L C+GF
Sbjct: 14  ALLLLQIGSGAICEGKSSEPAVRQ--TQVKWREGKKFRVEVMNKCPMCPIINLRLKCQGF 73

Query: 70  QTTKSIDPSILAVTDT---ECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIAC 122
             +  +DP+ L V  +    C+VN+GLP+     + F Y+   +F  + +S    C
Sbjct: 74  PQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

[Close]

BLAST of Carg16010 vs. ExPASy TrEMBL
Match: A0A6J1KP98 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497464 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAPF KLFAALLFVSLL+KGNCQCVSNDIAI Q M+GFQIHGMTEWNVTISN CLCSQSE
Sbjct: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDC+GFQTTKSIDPS+LAVTD+ECLVNNGLPIFKSN + FTYA DPKFDFKLISSQI 
Sbjct: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. ExPASy TrEMBL
Match: A0A6J1HGA0 (uncharacterized protein At1g05835-like OS=Cucurbita moschata OX=3662 GN=LOC111463301 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.6e-48
Identity = 96/122 (78.69%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MAP  KLFAALLFVS L K N QC  ++I I Q MTGFQIHGMTEWN T+SNNCLCSQSE
Sbjct: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           VKLDC+GFQTTKSIDP ILA+TDTECLVNNGLPIF S P+ FTYAQ+P+F+FK ISSQIA
Sbjct: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. ExPASy TrEMBL
Match: A0A5D3CMA8 (Protein TAPETUM DETERMINANT 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002630 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 88/122 (72.13%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MA  +KL AALL +S +  GNCQCV N+I ISQKMTGFQIHGMTEW+VTI+NNC+CSQS+
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           +KLDCKGF TT SIDPSIL+++D ECLVNNG PIF S P+ F YAQ PKF+FK ISSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. ExPASy TrEMBL
Match: A0A1S3B1L8 (protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 88/122 (72.13%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MA  +KL AALL +S +  GNCQCV N+I ISQKMTGFQIHGMTEW+VTI+NNC+CSQS+
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           +KLDCKGF TT SIDPSIL+++D ECLVNNG PIF S P+ F YAQ PKF+FK ISSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. ExPASy TrEMBL
Match: A0A0A0KLZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 87/122 (71.31%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           M  F KL AALL +SL+  GNCQC  N+I ISQ MTGFQIHGMTEW VTI+NNC+CSQS+
Sbjct: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120
           +KLDCKGF TT SIDPSILA++D+ECLVNNG PIF S P+ F YAQ PKF+FK +SSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Carg16010 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.6e-14
Identity = 42/119 (35.29%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 1   MAPFLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60
           MA  LK F  +L +S++  G C C    I I    TG +I G  EW VT+ N C C Q  
Sbjct: 1   MAFALKCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query: 61  VKLDCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQI 120
           V L C GF   K + P +L      CL+  G  +       FTYA  P + F+ + S++
Sbjct: 61  VTLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYAGQP-YIFRPVGSKV 118

[Close]

BLAST of Carg16010 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 9.7e-14
Identity = 38/117 (32.48%), Postives = 57/117 (48.72%), Query Frame = 0


Query: 6   KLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNC-LCSQSEVKLD 65
           KL   +LF++ + +G   C  N +++ Q  TG  +    EW V ++N C  C     +L 
Sbjct: 7   KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query: 66  CKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIAC 122
           C GF +   ID S+L  +   CLVN G  I     ++F Y  D  FD K+I   + C
Sbjct: 67  CVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

[Close]

BLAST of Carg16010 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 6   KLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNC-LCSQSEVKLD 65
           K+   +LF++ + +G   C  N +++ Q  TG  +    EW V ++N C  C     KL 
Sbjct: 7   KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query: 66  CKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIAC 122
           C GFQ+   +  S+L+ +   CL+N G  IF     +F Y  D  FD K+I   I C
Sbjct: 67  CVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

[Close]

BLAST of Carg16010 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 36/119 (30.25%), Postives = 55/119 (46.22%), Query Frame = 0


Query: 4   FLKLFAALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSEVKL 63
           FL L     FV+  Y G+       +++ Q  TG  +    EW V + N+  C  +   L
Sbjct: 8   FLCLVLLFAFVTQGY-GDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHTTL 67

Query: 64  DCKGFQTTKSIDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIACS 123
            C  F++   ID  +L+ +   CL+ NG  I   + + F Y  D  FD K++   IACS
Sbjct: 68  SCVRFKSVTPIDSKVLSKSGDTCLLGNGDSI---HDISFKYVWDTSFDLKVVDGYIACS 122

[Close]

BLAST of Carg16010 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 31/116 (26.72%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 10  ALLFVSLLYKGNCQCVSNDIAISQKMTGFQIHGMTEWNVTISNNC-LCSQSEVKLDCKGF 69
           ALL + +     C+  S++ A+ Q  T  +     ++ V + N C +C    ++L C+GF
Sbjct: 14  ALLLLQIGSGAICEGKSSEPAVRQ--TQVKWREGKKFRVEVMNKCPMCPIINLRLKCQGF 73

Query: 70  QTTKSIDPSILAVTDT---ECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIAC 122
             +  +DP+ L V  +    C+VN+GLP+     + F Y+   +F  + +S    C
Sbjct: 74  PQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

The following BLAST results are available for this feature:

BLAST of Carg16010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026828.1	3.7e-63	100.00	Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023518832.1	1.2e-58	94.26	uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]	[more]
XP_023004032.1	2.1e-55	88.52	protein TAPETUM DETERMINANT 1-like [Cucurbita maxima]	[more]
XP_038881121.1	5.7e-48	77.87	uncharacterized protein At1g05835-like [Benincasa hispida]	[more]
XP_022962948.1	7.4e-48	78.69	uncharacterized protein At1g05835-like [Cucurbita moschata]	[more]

BLAST of Carg16010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MS78	6.8e-04	26.72	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Carg16010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP98	1.0e-55	88.52	protein TAPETUM DETERMINANT 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497464 P...	[more]
A0A6J1HGA0	3.6e-48	78.69	uncharacterized protein At1g05835-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A5D3CMA8	3.1e-44	72.13	Protein TAPETUM DETERMINANT 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B1L8	3.1e-44	72.13	protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 ...	[more]
A0A0A0KLZ6	1.6e-43	71.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1	[more]

BLAST of Carg16010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32090.1	2.6e-14	35.29	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32110.1	9.7e-14	32.48	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	1.7e-13	32.48	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32100.1	1.1e-09	30.25	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G05835.1	4.8e-05	26.72	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF44	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 1..122
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16010-RA	Carg16010-RA	mRNA