Carg16009 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16009
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	trafficking protein particle complex subunit 12
Location	Carg_Chr07: 2357951 .. 2359108 (+)
RNA-Seq Expression	Carg16009
Synteny	Carg16009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGAGTTGCCGTCACCTGATTCTGGTACTCACAGAACTTCCGATCCCGAAACCCTAACATCAGCAATCGAGGGATTGACCATTTCCTCCGATCCTTTAACCAGTAAATTCAGTTCGCTTGACGATCTTGCGCACGAGCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCGATTTTGGATAAGGTTGCTAGGGCACGATCTCTTTCCCTGCTTCAAAAGCCCCATGATCACCTCACTTATCTCTCTTACAATGTTCTTGCCCTCGTCAAATTGCGTCGTTTCGCTGAAGGCTTGGCGGAACTTGATTCTCTTGAAGATCTTGATAGCTCTCAATACAGGTACGAAACTTATCCAAGTGTTTACCCTAATCGTACTGGCTCGATGGTCCCCTTTTCACTCCGGTGGCTACATGCCTTGATCCCTATCAAAATGGGCGAGCGTCAAGAAGGGCTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAACAGGAGAAAAATCTTGATGTCTCAGTGGATTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAACTGTATTATGGGTCATCATTTAAGTAACAAAGAGTTTGGGGTTTGTTTAAGTTTGATTGATAATTTGCTTAGTCGGGATTTTTCAGACCCTGCTCTGATTTCCAAACTTGGGTATATACAAATGCACGTCGGTGATATTGAAGGTGCAAAGCGTTCTTTTAATAAGATTGAGGACATGGTTAAAGAAGGGAAGAGTAGTGTGTCATTGAGCGAGGTAGAGATCAAGAACCTTGTGAATAGGAACAAGGCATTGGTGTTCTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATACGAGGAGTGCATCGAGAGGGACCATACGGACGTGGTGGCCATTAACAACAAGGCTCTTTGCTTGATGTACTTGAGGGATTTAGCAGATTCGATTAAGGTACTGGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTCAATGAAACAGTCATCGTGAATCTGTGCAGTATGTATGAATTGGCTTATGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCCTGTACTCGGATTTAA

mRNA sequence

ATGGAAAGTGAGTTGCCGTCACCTGATTCTGGTACTCACAGAACTTCCGATCCCGAAACCCTAACATCAGCAATCGAGGGATTGACCATTTCCTCCGATCCTTTAACCAGTAAATTCAGTTCGCTTGACGATCTTGCGCACGAGCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCGATTTTGGATAAGGTTGCTAGGGCACGATCTCTTTCCCTGCTTCAAAAGCCCCATGATCACCTCACTTATCTCTCTTACAATGTTCTTGCCCTCGTCAAATTGCGTCGTTTCGCTGAAGGCTTGGCGGAACTTGATTCTCTTGAAGATCTTGATAGCTCTCAATACAGGTACGAAACTTATCCAAGTGTTTACCCTAATCGTACTGGCTCGATGGTCCCCTTTTCACTCCGGTGGCTACATGCCTTGATCCCTATCAAAATGGGCGAGCGTCAAGAAGGGCTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAACAGGAGAAAAATCTTGATGTCTCAGTGGATTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAACTGTATTATGGGTCATCATTTAAGTAACAAAGAGTTTGGGGTTTGTTTAAGTTTGATTGATAATTTGCTTAGTCGGGATTTTTCAGACCCTGCTCTGATTTCCAAACTTGGGTATATACAAATGCACGTCGGTGATATTGAAGGTGCAAAGCGTTCTTTTAATAAGATTGAGGACATGGTTAAAGAAGGGAAGAGTAGTGTGTCATTGAGCGAGGTAGAGATCAAGAACCTTGTGAATAGGAACAAGGCATTGGTGTTCTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATACGAGGAGTGCATCGAGAGGGACCATACGGACGTGGTGGCCATTAACAACAAGGCTCTTTGCTTGATGTACTTGAGGGATTTAGCAGATTCGATTAAGGTACTGGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTCAATGAAACAGTCATCGTGAATCTGTGCAGTATGTATGAATTGGCTTATGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCCTGTACTCGGATTTAA

Coding sequence (CDS)

ATGGAAAGTGAGTTGCCGTCACCTGATTCTGGTACTCACAGAACTTCCGATCCCGAAACCCTAACATCAGCAATCGAGGGATTGACCATTTCCTCCGATCCTTTAACCAGTAAATTCAGTTCGCTTGACGATCTTGCGCACGAGCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCGATTTTGGATAAGGTTGCTAGGGCACGATCTCTTTCCCTGCTTCAAAAGCCCCATGATCACCTCACTTATCTCTCTTACAATGTTCTTGCCCTCGTCAAATTGCGTCGTTTCGCTGAAGGCTTGGCGGAACTTGATTCTCTTGAAGATCTTGATAGCTCTCAATACAGGTACGAAACTTATCCAAGTGTTTACCCTAATCGTACTGGCTCGATGGTCCCCTTTTCACTCCGGTGGCTACATGCCTTGATCCCTATCAAAATGGGCGAGCGTCAAGAAGGGCTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAACAGGAGAAAAATCTTGATGTCTCAGTGGATTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAACTGTATTATGGGTCATCATTTAAGTAACAAAGAGTTTGGGGTTTGTTTAAGTTTGATTGATAATTTGCTTAGTCGGGATTTTTCAGACCCTGCTCTGATTTCCAAACTTGGGTATATACAAATGCACGTCGGTGATATTGAAGGTGCAAAGCGTTCTTTTAATAAGATTGAGGACATGGTTAAAGAAGGGAAGAGTAGTGTGTCATTGAGCGAGGTAGAGATCAAGAACCTTGTGAATAGGAACAAGGCATTGGTGTTCTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATACGAGGAGTGCATCGAGAGGGACCATACGGACGTGGTGGCCATTAACAACAAGGCTCTTTGCTTGATGTACTTGAGGGATTTAGCAGATTCGATTAAGGTACTGGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTCAATGAAACAGTCATCGTGAATCTGTGCAGTATGTATGAATTGGCTTATGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCCTGTACTCGGATTTAA

Protein sequence

MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSCTRI

Homology

[Close]

BLAST of Carg16009 vs. NCBI nr
Match: KAG7026829.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 755.4 bits (1949), Expect = 2.5e-214
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. NCBI nr
Match: XP_022962944.1 (trafficking protein particle complex subunit 12 [Cucurbita moschata])

HSP 1 Score: 753.1 bits (1943), Expect = 1.2e-213
Identity = 384/385 (99.74%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESE PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. NCBI nr
Match: KAG6594864.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 752.7 bits (1942), Expect = 1.6e-213
Identity = 383/385 (99.48%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSK+KDKQEKNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKLKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSASLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. NCBI nr
Match: XP_023004025.1 (trafficking protein particle complex subunit 12 [Cucurbita maxima])

HSP 1 Score: 748.4 bits (1931), Expect = 3.0e-212
Identity = 382/385 (99.22%), Postives = 382/385 (99.22%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESE PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYP VYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPIVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLV KDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVSKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. NCBI nr
Match: XP_023518819.1 (trafficking protein particle complex subunit 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 744.6 bits (1921), Expect = 4.3e-211
Identity = 381/385 (98.96%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESE PSPDSGTHRTSD ETLTSAIE LTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDTETLTSAIEELTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDR YELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRLYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. ExPASy Swiss-Prot
Match: Q8WVT3 (Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-33
Identity = 108/367 (29.43%), Postives = 174/367 (47.41%), Query Frame = 0


Query: 43  DDLAHELSSLQDLATRGSWRSILDKVAR---------ARSLSLLQKPHDHLTYLSYNVLA 102
           D +      L+ L +  +WR+ +D   R          +S  L     D L      +  
Sbjct: 375 DSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLAL 434

Query: 103 LVKLRRFAEGLAELDSLEDLDSSQYRYETYPSVYPNRTGSMVPFSLRWLHALIPIKMGER 162
           LVKL  F     E +   +LD     YE YP VYP R GSMVPFS+R LHA +   +G  
Sbjct: 435 LVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNP 494

Query: 163 QEGLDRFYELLDFVQSKVKDKQEKNL--------------DVSVDLWKKREVFVINCIMG 222
           QE LDR ++ +  V SK+    E+ L                S+ LW+ R   V+  +  
Sbjct: 495 QESLDRLHK-VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMAN 554

Query: 223 HHLSNKEFGVCLSLIDNLLS-RDFSDPALISKLGYIQMHVGDIEGAKRSFNKIEDMVKEG 282
             L  K++ + +    +++      +P L+S +G I + +GDI+ A++ F  +E      
Sbjct: 555 CLLLMKDYVLAVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVE------ 614

Query: 283 KSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYL 342
           K +  L  ++ K +V  N A + L   ++  A R + E +  D  + VA NN A+CL+YL
Sbjct: 615 KVTQKLDGLQGKIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYL 674

Query: 343 RDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDF 386
             L DS++ LE  +++ P   L+E+V+ NL +MYEL      + K+ L   +A    D F
Sbjct: 675 GKLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSF 734

[Close]

BLAST of Carg16009 vs. ExPASy Swiss-Prot
Match: Q8K2L8 (Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trappc12 PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-33
Identity = 108/358 (30.17%), Postives = 175/358 (48.88%), Query Frame = 0


Query: 52  LQDLATRGSWRSILDKVARARSL-------SLLQKPH--DHLTYLSYNVLALVKLRRFAE 111
           L+ L +  +WR+ +D   R  +        + L   H  D L      +  LVKL  F  
Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQN 505

Query: 112 GLAELDSLEDLDSSQYRYETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYE 171
              E +   +LD     YE YP VYP R GSMVPFS+R LHA +   +G  QE LDR + 
Sbjct: 506 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR 565

Query: 172 LLDFVQSKVKDKQEKNL--------------DVSVDLWKKREVFVINCIMGHHLSNKEFG 231
            +  V SK+    E+ L                SV LW+ R   V+  +    L  K++ 
Sbjct: 566 -VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYV 625

Query: 232 VCLSLIDNLLS-RDFSDPALISKLGYIQMHVGDIEGAKRSFNKIEDMVKEGKSSVSLSEV 291
           + +     ++      +P L+S +G I + +GDI+ A++ F  +E      K +  L  +
Sbjct: 626 LAVDAYLTVIKYYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVE------KVTQKLDGL 685

Query: 292 EIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKV 351
           + K +V  N+A ++L   ++  A + + E +  D T+ VA NN A+CL+YL  L DS++ 
Sbjct: 686 QGKIMVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSLRQ 745

Query: 352 LENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSCTRI 386
           LE  +++ P   L+E+V+ NL +MYEL      + K++L   +A    D F++ C ++
Sbjct: 746 LEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFNTQCLKL 796

[Close]

BLAST of Carg16009 vs. ExPASy TrEMBL
Match: A0A6J1HII0 (trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111463298 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 5.9e-214
Identity = 384/385 (99.74%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESE PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. ExPASy TrEMBL
Match: A0A6J1KTF6 (trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111497457 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.5e-212
Identity = 382/385 (99.22%), Postives = 382/385 (99.22%), Query Frame = 0


Query: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60
           MESE PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120
           WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180
           ETYP VYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD
Sbjct: 121 ETYPIVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240
           VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLV KDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVSKDYLSAVREYEECIER 300

Query: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSSCTRI 386
           EIKRTLNNWIARVAPDDFDSSCTRI
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Carg16009 vs. ExPASy TrEMBL
Match: A0A5A7SYI2 (Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002640 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.6e-195
Identity = 349/384 (90.89%), Postives = 371/384 (96.61%), Query Frame = 0


Query: 2   ESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61
           ES  PSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63

Query: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123

Query: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181
           +YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183

Query: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243

Query: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303

Query: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363

Query: 362 IKRTLNNWIARVAPDDFDSSCTRI 386
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 364 IKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Carg16009 vs. ExPASy TrEMBL
Match: A0A1S4DUA2 (trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103484996 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.6e-195
Identity = 349/384 (90.89%), Postives = 371/384 (96.61%), Query Frame = 0


Query: 2   ESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61
           ES  PSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63

Query: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123

Query: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181
           +YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183

Query: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243

Query: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303

Query: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363

Query: 362 IKRTLNNWIARVAPDDFDSSCTRI 386
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 364 IKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Carg16009 vs. ExPASy TrEMBL
Match: A0A0A0KGA7 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.2e-191
Identity = 342/384 (89.06%), Postives = 365/384 (95.05%), Query Frame = 0


Query: 2   ESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61
           ES  PSPDS +H TSDPETLT+  E L ISSDPLT++F SL+DLAH+L SLQDLATRGSW
Sbjct: 4   ESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATRGSW 63

Query: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121
           RSILDKVARAR+L+LLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 64  RSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123

Query: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181
           +YPSVYPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 124 SYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKKLDV 183

Query: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241
           SV+LWKKR VFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 184 SVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243

Query: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301
           EGAKRSFN+IE++VKEGKSS SLSEVE+KNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303

Query: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363

Query: 362 IKRTLNNWIARVAPDDFDSSCTRI 386
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 364 IKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Carg16009 vs. TAIR 10
Match: AT4G39820.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 497.7 bits (1280), Expect = 8.6e-141
Identity = 232/369 (62.87%), Postives = 307/369 (83.20%), Query Frame = 0


Query: 17  DPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSILDKVARARSLSL 76
           +P     A   +T  +D    +F+SLD+L H+L SL +L+TRGSW++IL+K+++AR+L L
Sbjct: 40  EPTAFELASSQVTSVADLPPERFNSLDELTHDLGSLHELSTRGSWQAILEKISQARALFL 99

Query: 77  LQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYPSVYPNRTGSMVP 136
           L KPH+HLTYL+Y V+AL KLRR  E   EL+SL D D + YRYE++P +YPNR GSMVP
Sbjct: 100 LTKPHEHLTYLTYQVMALAKLRRSDEASHELNSLHDFDGTHYRYESFPEIYPNRRGSMVP 159

Query: 137 FSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVDLWKKREVFVINC 196
           FSLRWL+ALIP K+G RQEGLDR Y LLDFV+ ++++K+ ++L+ SV+LWKKRE FV+NC
Sbjct: 160 FSLRWLYALIPTKLGNRQEGLDRLYVLLDFVRDRIREKESQSLESSVELWKKRETFVMNC 219

Query: 197 IMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGAKRSFNKIEDMVK 256
           ++G HL +KEFGV L L+  L++RD  DP LISKLG +QM  GD+EGAK +F+++E M+ 
Sbjct: 220 LLGFHLGHKEFGVSLDLMKELINRDPLDPVLISKLGSVQMQFGDVEGAKTTFDRVEKMLN 279

Query: 257 EGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDVVAINNKALCLM 316
           EGKS+  L+E++  NLV RNKALV++V KDY+SAVREY++CIERD++D++A+NNKALCLM
Sbjct: 280 EGKSNGLLNEIQFNNLVGRNKALVYVVAKDYVSAVREYDKCIERDNSDIIAVNNKALCLM 339

Query: 317 YLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPD 376
           YLRDL+D+IKV+E+ALERVPT ALNE+++VNLCSMYELAYVNH+++KRTLNNWIARVAPD
Sbjct: 340 YLRDLSDAIKVMESALERVPTAALNESLVVNLCSMYELAYVNHTDVKRTLNNWIARVAPD 399

Query: 377 DFDSSCTRI 386
           DFDSSCTR+
Sbjct: 400 DFDSSCTRV 408

The following BLAST results are available for this feature:

BLAST of Carg16009 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026829.1	2.5e-214	100.00	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]
XP_022962944.1	1.2e-213	99.74	trafficking protein particle complex subunit 12 [Cucurbita moschata]	[more]
KAG6594864.1	1.6e-213	99.48	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]
XP_023004025.1	3.0e-212	99.22	trafficking protein particle complex subunit 12 [Cucurbita maxima]	[more]
XP_023518819.1	4.3e-211	98.96	trafficking protein particle complex subunit 12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16009 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVT3	1.2e-33	29.43	Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
Q8K2L8	2.0e-33	30.17	Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of Carg16009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HII0	5.9e-214	99.74	trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTF6	1.5e-212	99.22	trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7SYI2	3.6e-195	90.89	Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUA2	3.6e-195	90.89	trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KGA7	9.2e-191	89.06	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 ...	[more]

BLAST of Carg16009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39820.1	8.6e-141	62.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 305..338 e-value: 0.32 score: 20.1 coord: 225..258 e-value: 310.0 score: 1.9 coord: 271..304 e-value: 190.0 score: 3.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 200..369 e-value: 4.6E-13 score: 51.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 215..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR21581:SF28	F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED	coord: 32..384
None	No IPR available	PANTHER	PTHR21581	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	coord: 32..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16009-RA	Carg16009-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity