Carg15944 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTCGATAACAGAAAAAGAAAAAAGAAAAAGAAAAAAGAAAAGGAAAAGGAAAGGGAAAAGGAAAAGGCGAGAGAAATGCGGGAAGAAGAGGAATCTGGTGTAGCCAATTTCGGGCTTCCCGAGGAAGTACTGGAAGTCTTACCGTCGGATCCATTTGAGCAGCTCGATGTGGCTCGGAAAATCACTTCCATTGCTCTCTCCATGCGTGTTTCTGCGCTCGAATCCGAATCCTCCGCTCTCCGTACTCAGCTTTCCGAGAAGGACGCGCTCATCGCGGAGTTGCAATCGCAGATCGAGTCACTCGATGCCGCCCTATCCGAGAAATCCGAAATTCTCGCCCGCGCCGATCAGGAAAAGGTTCAGCCAGTTCATTTGTTTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTCCCTTTCTATTGCTGCTTGACTTTGTTTTGATTTGGATTATGCACTTGTGCTCACTGCAATTTGCAGGAGACGTTGTTGCAAGAGAATGCATCGCTTTCTAACACCGTGAAGAAGCTTACTCGAGATGTCTCGAAGGTATGGTCTCAGTTCTTAGTTCTTAGTCGTTTGTTGTTTGTGTATTTTGGAATTTTCGCAACGATTACTTACACTAACATTTCAAGTTAATTACGATGAATACGCAAATTTTGGAAGTTACAATGGAGACAATTTATGATTAACATTAGGATAGGATTTCCGAATTTTTGGAAAATAGTACTATAAATCATGACCTATTGACTTCCAAATTTTTGTTCTGTCAATTGACATAGTGGTGTTTTTTGAAATCCATCGTAAGGTTCATAGTTTTATTTTTATCTGGAAGAAAATGGTGGAACCTTTTGAATTAGCAGGCAAAAGTGCAGGGGACTACTTCCATTAATATATGTAAAATTTGTTATCTTCTATGAAATAAGAGGTTCGACTCTCTTGCATTGTTTGCAGTTGGAAGTCTTCCGAAAGACGCTAATGCAGTCCCTTCATGAGGAAGAGAGCTCCGTAAGTTTTCTTTATCCAATGCCTAAATTGCAATATTAGTACGTAAGAAGCATATGATAGATACGAGATACATATAGATATAGATACATCAGACACACGATGATATATCATTTTTTCATAATCTAGGAGACAAGACACGACAAGGACTCGTTGATAAGCATAACTTTTTAAAAACATATTCAGATTTTTTATTCGAAGAAAATTAAAAGTCAATAAGCTTATGCATTTCCATCCATTAAAAATGAGTTTGATGTATTTTACTCTCAAATTATGTACGGAAGAGGAGGCCTTATCCTCAAAGAGACGACGGTTAGTTTCCAACTTCAAGTTCCAAATCAAAGCTCTAACCGCCATAGCCTAACAAGTTTTCAATACACATTGGACTGGGACACGTTAACCAACAATAATATCCGTGCTTCTGTGATTGACCCTTTGTTCTATATCCATCAACATCCTAATTCTGATTCCAACTTCAACGACTTGCTTTTCGAGCTCGTCGAGTTACGGATCATCACTATTGATAGAAAATTTTAAATGGAAAGCAACAGTTGGTAAAAACATAAACACTCATTTATAAACATACTCATAAAACATACGATAAAAAGTTTTTGAGAAGCATGCTGAAGTCAACATTTTTTTTATATCAACCCTCTTTGTGCTACTACAGACAGGAAGTTCAGAGGCTGTCGTTAAACTAGAGAGTCAGGAAAGTTTGCCCTCTGCTCCGCAGGTTGGAGGTACTATAAGTTACTTAAAGTCAGTTTCTGTGTTTGCACATTATTGTTGTTCATAGATTGATTTTTCATGGCTTACTTGTAATTGTAAAGCACATAAATGATTTTATATGATAATCAAATTGGTTACTTTTGTACGGGCGCTCGCAATTTCCCTAATGTATGCCTTCGGTTCTGACTAGTACATTTTCTTTTTGTTTTAGAAGATGATTTATCATTGCCACCATCTAAATACTCATCAATCCAGAGCAACGCCTCTGAAACAGTGAACCCTGTAAAAGATGAGCCTGAGGAAGATGGTAAGATTTCTACATGTTATGATATTCTTTCCTATATGTAATACACGAAACGAACTGATAACTGTAGCAAATTGCTGATGTATAAAATTACAAATACCAAGGGGGGCAGGCTTACGTTTAATCATTTTAATTAACACAAAAAAGTTTGAAACTGATTTAAGTCTCTTAGTTCTGGTTATGTTGTTTTTCACTTTTCTTTATTCCTATGCTGCAGTGGCAGCTTCAAGACCTCGTGTATCAAACAGCCTTCTGTTAGCCTCACAGACTAGCACACCTCGGCTGACACCTCCCGGTTCTCCCCCTATTTCTTCTGCATCTGTGTCCCCTACCAGAACATCTAAACCTGTTTCTCCAAAGCGACATTCAATGTCATTCTCTGTTTCAAGGGGGATGTTTGATAGAACCTCAATGTATTCTTCTGTCTCCAGCAATCACAGTTCAGTTTCAAGCCCTCATGCAGGGGCTCATACTGGTTTGCTCCTAAAACTCTCTTCTTGCAAATTTGTAGTTTAGAATTATGTTGGTTGCGCATTTTAGAGATCTTAAGGAATTTGTGGGTGTGCTTTCCAAATGCGAATTTGAAGAAAAGAACTCTGGTTGGTTATAGTAGTGCAATTCCTGTTGGGCAATGTTGTTGTGTTTCTTTTCTTATCCCTCTTATCTGATTGTTTTGCAGGTCCCTTCTACACATTTGAAGTGATTTTTTAAAAAAAAAATCACAAAAAGGAGTTCGTTTCAAAATAATTCGATGAAGAAAATTGTTTTTTAGAATGACTAATTTGGTAAATAGATTCTAAATAAACAATTTACGCATGTAGTCTATTTGATTAATCTTCTTGTCGTCAAGTAATGCTACCTTATTTTTGTTAAGATTCTTGAAACTATATTATTTTCTCAAGTACAGTAAACATGAAACTTGTGCTGAAAATAAGGTCACATGCTTAAATTTCATTTCAATGATCCTACTGGATTATGTATATTATGTTAATGAGGGTTTGCACTGTGTGATTACTGTGTATCAGATGCATTGATGATTGTACTAATTAATGAACAGTATAAATATGATGTATAATATTTCCATGACTGCCAAAAGTGAGACGAGTAGTATACCTTCCGTGATTGTATACCCACCAAGACATAGATTGTCATTGCATTTGAATAATGTAACTGACATTTTTAATCATCTTTATCAATTGTTTTCAGGACGAACTCGGGTCGATGGAAAGGAATTCTTCCGCCAAGTGAGGTAAGATCTGGTAGATGCATAGAGTTTGAACATCAAGTACTTTTAGAAAGTTAACGGCACCTTAAGAAGCCTGGATATGGATACATATACGACTACATGTACACCGTGCACGCCAATTTTTAAAAATCTAGGACATAATTACTAAAATATATGTTTTAAAAAATGTAAGTTCATATGTTTATGCATTTATACACTTAAAAATGAGTTTCATATTCTTTACTTTCAATTCTTTTTGTTATGTGCATATTTAGTATTCGTTATGTGTTTAACAAATGTTAGATCTATATTGGCTTTGTACCACTAGTGTCTAACATATTTATTGTGCTAGCAAGTGTCCAATATGTGTCCAACAAATGTCGGAGTGTCCAAGTGTCATCGAACAAGCTAGCCACACTAAAATGTTCATGCTTCTTGGGTGTCACTTGTTTAGCTTATCTTTAATGATTAGTTAAGATATCATTTTGGTCTCTATATTATGGAACAGGAACTTGTTCCGGTCTCTATATTTCCAAATCTCTATACTTTTAATAAATTTTAAAACGAGTTTGAAGTTAAAAAAAAACATTTATGCATAATATAGATATGTTTCTCAAATTCCTAGAGGAAGGCTCACATGAACTGATGATGAGGAATAATTATAAAGATATGTTTCTCAAATTCCTAGAGGAAGGCTCACATGAACTGATGATGAGGAATAATTATAAGATCAATCGAAAGTTTAGGAAATAAATTGGACATCGACTAAACTAGATCGAATTTTAAAGTATGTGAATCAAAATGATACTTTAACTTGTTCAACCTAGCAGGATCAGTTAATGCACTCTACACCGAGTGTTTTCAGCCACCATTTTCCTTTTTCTATTTCGTATATTTGTGCTTGCAGATTTTGCATCTGGTCATTATGATTTATGAGAGTTTCTAATTTTCCCCTCTCCTGTAGGAGCCGATTGTCCTATGAGCAGTTCAGTGCATTCTTAACCAATGTCAAGGAGCTGAATGCCCATAAGCAAACAAAAGAGGTATTCTCCTCTATCACTCCTCACACACGCACACACGCACACGCACACGCACACGCTCTAGTGCATGGTTAAACATTTATGGATCATCGTTGCATACTTCAGGAGACGCTTCGGAAGGCTGATGAGATATTTGGCCAGGATAACAAGGATCTTTTTACCATATTTGAAGGGTTGATTACTCGTAATGTGCACTGAAAATGCTTTGGATATAGTGTATGTAGAGTTTATAAGCATTGTCTGCACCTATCAACTTCTATTTATTGTATGTATTACATGTATTCATTTTGATTTCCATGAAATAAAATTTCGAACTTAGCATTATTAATCTAGAGGCCTTAGTTATGAGAATAAATGGAATGATTTTTATTAGGACTAAATCAGACGGCTTTGCTGTATTCAAAATTTTACTCAGGTAAACGTGTTATTGTTTTTATAAGTTATGTGTACGATCTGTCGGTTTATTTATTTATTATTGTAAGATCCCGCATCGATTGGAGAGGGGAAGGAAACATTCTTTATAAGGGTGTGGAAACC CAGTCGATAACAGAAAAAGAAAAAAGAAAAAGAAAAAAGAAAAGGAAAAGGAAAGGGAAAAGGAAAAGGCGAGAGAAATGCGGGAAGAAGAGGAATCTGGTGTAGCCAATTTCGGGCTTCCCGAGGAAGTACTGGAAGTCTTACCGTCGGATCCATTTGAGCAGCTCGATGTGGCTCGGAAAATCACTTCCATTGCTCTCTCCATGCGTGTTTCTGCGCTCGAATCCGAATCCTCCGCTCTCCGTACTCAGCTTTCCGAGAAGGACGCGCTCATCGCGGAGTTGCAATCGCAGATCGAGTCACTCGATGCCGCCCTATCCGAGAAATCCGAAATTCTCGCCCGCGCCGATCAGGAAAAGGAGACGTTGTTGCAAGAGAATGCATCGCTTTCTAACACCGTGAAGAAGCTTACTCGAGATGTCTCGAAGTTGGAAGTCTTCCGAAAGACGCTAATGCAGTCCCTTCATGAGGAAGAGAGCTCCACAGGAAGTTCAGAGGCTGTCGTTAAACTAGAGAGTCAGGAAAGTTTGCCCTCTGCTCCGCAGGTTGGAGAAGATGATTTATCATTGCCACCATCTAAATACTCATCAATCCAGAGCAACGCCTCTGAAACAGTGAACCCTGTAAAAGATGAGCCTGAGGAAGATGTGGCAGCTTCAAGACCTCGTGTATCAAACAGCCTTCTGTTAGCCTCACAGACTAGCACACCTCGGCTGACACCTCCCGGTTCTCCCCCTATTTCTTCTGCATCTGTGTCCCCTACCAGAACATCTAAACCTGTTTCTCCAAAGCGACATTCAATGTCATTCTCTGTTTCAAGGGGGATGTTTGATAGAACCTCAATGTATTCTTCTGTCTCCAGCAATCACAGTTCAGTTTCAAGCCCTCATGCAGGGGCTCATACTGGACGAACTCGGGTCGATGGAAAGGAATTCTTCCGCCAAGTGAGGAGCCGATTGTCCTATGAGCAGTTCAGTGCATTCTTAACCAATGTCAAGGAGCTGAATGCCCATAAGCAAACAAAAGAGGAGACGCTTCGGAAGGCTGATGAGATATTTGGCCAGGATAACAAGGATCTTTTTACCATATTTGAAGGGTTGATTACTCGTAATGTGCACTGAAAATGCTTTGGATATAGTGTATGTAGAGTTTATAAGCATTGTCTGCACCTATCAACTTCTATTTATTGTATGTATTACATGTATTCATTTTGATTTCCATGAAATAAAATTTCGAACTTAGCATTATTAATCTAGAGGCCTTAGTTATGAGAATAAATGGAATGATTTTTATTAGGACTAAATCAGACGGCTTTGCTGTATTCAAAATTTTACTCAGGTAAACGTGTTATTGTTTTTATAAGTTATGTGTACGATCTGTCGGTTTATTTATTTATTATTGTAAGATCCCGCATCGATTGGAGAGGGGAAGGAAACATTCTTTATAAGGGTGTGGAAACC ATGCGGGAAGAAGAGGAATCTGGTGTAGCCAATTTCGGGCTTCCCGAGGAAGTACTGGAAGTCTTACCGTCGGATCCATTTGAGCAGCTCGATGTGGCTCGGAAAATCACTTCCATTGCTCTCTCCATGCGTGTTTCTGCGCTCGAATCCGAATCCTCCGCTCTCCGTACTCAGCTTTCCGAGAAGGACGCGCTCATCGCGGAGTTGCAATCGCAGATCGAGTCACTCGATGCCGCCCTATCCGAGAAATCCGAAATTCTCGCCCGCGCCGATCAGGAAAAGGAGACGTTGTTGCAAGAGAATGCATCGCTTTCTAACACCGTGAAGAAGCTTACTCGAGATGTCTCGAAGTTGGAAGTCTTCCGAAAGACGCTAATGCAGTCCCTTCATGAGGAAGAGAGCTCCACAGGAAGTTCAGAGGCTGTCGTTAAACTAGAGAGTCAGGAAAGTTTGCCCTCTGCTCCGCAGGTTGGAGAAGATGATTTATCATTGCCACCATCTAAATACTCATCAATCCAGAGCAACGCCTCTGAAACAGTGAACCCTGTAAAAGATGAGCCTGAGGAAGATGTGGCAGCTTCAAGACCTCGTGTATCAAACAGCCTTCTGTTAGCCTCACAGACTAGCACACCTCGGCTGACACCTCCCGGTTCTCCCCCTATTTCTTCTGCATCTGTGTCCCCTACCAGAACATCTAAACCTGTTTCTCCAAAGCGACATTCAATGTCATTCTCTGTTTCAAGGGGGATGTTTGATAGAACCTCAATGTATTCTTCTGTCTCCAGCAATCACAGTTCAGTTTCAAGCCCTCATGCAGGGGCTCATACTGGACGAACTCGGGTCGATGGAAAGGAATTCTTCCGCCAAGTGAGGAGCCGATTGTCCTATGAGCAGTTCAGTGCATTCTTAACCAATGTCAAGGAGCTGAATGCCCATAAGCAAACAAAAGAGGAGACGCTTCGGAAGGCTGATGAGATATTTGGCCAGGATAACAAGGATCTTTTTACCATATTTGAAGGGTTGATTACTCGTAATGTGCACTGA MREEEESGVANFGLPEEVLEVLPSDPFEQLDVARKITSIALSMRVSALESESSALRTQLSEKDALIAELQSQIESLDAALSEKSEILARADQEKETLLQENASLSNTVKKLTRDVSKLEVFRKTLMQSLHEEESSTGSSEAVVKLESQESLPSAPQVGEDDLSLPPSKYSSIQSNASETVNPVKDEPEEDVAASRPRVSNSLLLASQTSTPRLTPPGSPPISSASVSPTRTSKPVSPKRHSMSFSVSRGMFDRTSMYSSVSSNHSSVSSPHAGAHTGRTRVDGKEFFRQVRSRLSYEQFSAFLTNVKELNAHKQTKEETLRKADEIFGQDNKDLFTIFEGLITRNVH Homology
BLAST of Carg15944 vs. NCBI nr
Match: KAG6593933.1 (hypothetical protein SDJN03_13409, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026275.1 hypothetical protein SDJN02_12775 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 628.2 bits (1619), Expect = 4.1e-176 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
BLAST of Carg15944 vs. NCBI nr
Match: XP_022930326.1 (uncharacterized protein At4g15545-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 621.7 bits (1602), Expect = 3.8e-174 Identity = 344/347 (99.14%), Postives = 344/347 (99.14%), Query Frame = 0
BLAST of Carg15944 vs. NCBI nr
Match: XP_023515351.1 (uncharacterized protein At4g15545-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 619.8 bits (1597), Expect = 1.5e-173 Identity = 343/347 (98.85%), Postives = 343/347 (98.85%), Query Frame = 0
BLAST of Carg15944 vs. NCBI nr
Match: XP_023000298.1 (uncharacterized protein At4g15545-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 617.5 bits (1591), Expect = 7.2e-173 Identity = 342/347 (98.56%), Postives = 342/347 (98.56%), Query Frame = 0
BLAST of Carg15944 vs. NCBI nr
Match: XP_022930327.1 (uncharacterized protein At4g15545-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 615.1 bits (1585), Expect = 3.6e-172 Identity = 343/347 (98.85%), Postives = 343/347 (98.85%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy Swiss-Prot
Match: Q93W28 (Uncharacterized protein At4g15545 OS=Arabidopsis thaliana OX=3702 GN=At4g15545 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 2.1e-98 Identity = 215/355 (60.56%), Postives = 260/355 (73.24%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy TrEMBL
Match: A0A6J1EQM1 (uncharacterized protein At4g15545-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436809 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.9e-174 Identity = 344/347 (99.14%), Postives = 344/347 (99.14%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy TrEMBL
Match: A0A6J1KM83 (uncharacterized protein At4g15545-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494572 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 3.5e-173 Identity = 342/347 (98.56%), Postives = 342/347 (98.56%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy TrEMBL
Match: A0A6J1EQ60 (uncharacterized protein At4g15545-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436809 PE=4 SV=1) HSP 1 Score: 615.1 bits (1585), Expect = 1.7e-172 Identity = 343/347 (98.85%), Postives = 343/347 (98.85%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy TrEMBL
Match: A0A6J1KJI5 (uncharacterized protein At4g15545-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494572 PE=4 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 3.3e-171 Identity = 341/347 (98.27%), Postives = 341/347 (98.27%), Query Frame = 0
BLAST of Carg15944 vs. ExPASy TrEMBL
Match: A0A1S3C999 (uncharacterized protein At4g15545-like OS=Cucumis melo OX=3656 GN=LOC103497903 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 2.6e-152 Identity = 310/346 (89.60%), Postives = 324/346 (93.64%), Query Frame = 0
BLAST of Carg15944 vs. TAIR 10
Match: AT4G15545.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 360.5 bits (924), Expect = 1.5e-99 Identity = 215/355 (60.56%), Postives = 260/355 (73.24%), Query Frame = 0
BLAST of Carg15944 vs. TAIR 10
Match: AT1G16520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). ) HSP 1 Score: 206.8 bits (525), Expect = 2.7e-53 Identity = 151/337 (44.81%), Postives = 205/337 (60.83%), Query Frame = 0
BLAST of Carg15944 vs. TAIR 10
Match: AT1G56080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast hits to 193 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). ) HSP 1 Score: 193.0 bits (489), Expect = 4.1e-49 Identity = 141/335 (42.09%), Postives = 195/335 (58.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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