Carg15922 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGAATATTCAGCAGTTCGATCATGTCACCGCCGGACGAGCTGGTGGCCGCCGGCTGCCGGACTCCATCGCCGAAGATTTCTTCGACGGCGCTGGCGAAGCGGTTCGTGGATACCAACGCCGCCGCCATCTCTGTTCAGATCGGCGACCATGTTCATCTCGCCTTCACTCACCACAACGAATCTCCTCTGCGCCCCAGGTACCGGAGATTCTCCGTTAAAACGCCGTCGTACGGTGGCGCTCGGAATTAAACCCTTTTTACTAAGCAATACGAATATGAACCAAGAAAAACGTAAATTATAAGTTTTAAGTTTTTTTTACCTTTTTAATTAATTAATTAATTAATTTCGTGTCTAAATAATTTAGATGTTATAATAACGTAAATTATAATAACGTTTTACCCTCTTTTAAATGATTTAAAATTACTTAAAAATTTATTACCCTAAATTTTTATTATAAAAATATTTTTGAAATGTTTATGAAATGTCGAGACTAATGATATTGTAGGGGTACTGTTGTCATTTCACACTTTGTAGCAAGCCGTCATCTCGAGATTTCTAATTAACAGCATTTTAGATGATATTGTAGGGGTACTGTTGTCATTTCACACTTCATAGCAAGCCGTCATCTCGAGAATTTTAGTTAACGGTACTTTAGTAGTATCTAAAAACAAAAATCCTTGATTTTTTTTTTTAATTTTAAAAATAATAAAATTTCTAAATGTGTGCTTCTAATTTTAATCTCTAAACTCTTACAATTTATACTACATTTAATATTAATAGGAATATTTTCCAATTTTAAATTAAAATTGAGATACCTGTTCAACAAAATTGAAAAACTAAATAAAAAAGGCTTTTTAATATTCGTCATATATATATATATATATATTTATTATTATTATTATTGTTATTTTTAAATGAAAATTTGAGTACTGAAGAACTGAAAGGCCATGGCAGATCGTTTGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCCCTAGACAATTTGGGAAGCTTAAGGAACCAATACGGTCTTCCTAAATCCACCAATGAAGGTCTCTTAATCATAGAGGCTTACAAAGCTCTCCGTGATCGAGCTCCATATCCGGCCAACCATGTCGTCAGCCATCTTAGCGGCAGTTTCGCTTTCGTCCTCTTCGACAATTCCACCTCCACTCTCTTTGTCGCCTCTGTAACTCAAATTTCAACTTCTAGTCTTCAAAATCGATGAACAGAGCATCCATTTCTGATTTCGCTTTCGATTGATTTTGGATTTTGCAGGATCAGTTCGGGAAAGTGCCTTTGTTTTGGGGAATCACTGCCGATGGATACATTGCGTTCGCCGATGATGCAGGTCTCCTCAAAAGCGCTTGTGGAAAATCCCTCGCTTCGTTTCCTCAAGGTATTTTGAAAATTTAGGGCTCGATTTTGTTAGATTTTAAAATTAGGGCAAATGGAGTTATGTTGGATTGTTTATTTCGATTTCAGGCTGTTTCTTCTCCACGGCGGAGGGTGAATTGAGATGCTATGAGAATCCGAAGAACAAGATTACTGCTGAGCCTGCTCCTGAGGAAGAGATCTGGGGTGCGAAATTCAAGGTATGTGATTATCAAGCTCTTTTTTTCAAATCTGGATTTAGGAGAATGGATACAAAGTTAGGATTGGAGTTCACTGAAAGTCTGAAATCATCATTGATTCACTGAATTTCAACTTTTTTCTGTGAGTGATGGTCACTGTTGAAGAGTCAAAGATTATGATCTTATCTCAATGGAACTGGAAAGTAGTTTAGCCACAAAACAAAGAATTCACTTTCTTTTGGACTGGATATCATATTCATAAGGTAGTGGTGACTGGTGAGCCCCTCCCTTCCTTTTCAACGACTATAAAAAGAATTTCAAGGATATACTTTTCAATGAGACATTCACTTTCTATGTCCCCACCCATTGAACAATCTTCAGCTTGGATTTGGTAATGACAAAACTATATCTAAACATAGATTAAAGCTTTCTTCCCTGTTCTATCTAGATCAATATGATGTTCTTCTGAACTTTGGATGAAAAAATTTGATATATCAATGGAAGCTGGAACAAGTTTAGTACTAGGTCATATGGGAAACCTCAGTCACATATTATGTTCATTTACCCAATCAATAATAAAGGCTTGCTTGAACATAGTAGGTTAAATGTTGTGTATTCAAATCTATTTGGGTCTTCATTAATCATTTTACAAGAAATTAATGACGGGCAATAAGAGAAGTAAAGGGTTTAGAGGAAATGGGGTTCAAACCATTGTACTGTGTGGGTACTCACCAAATGTAACGAGGTTAGGTAGTTGTAACAGCCCAAGTACACTGCTAGCAGATATTGTCCGCTTTAGCTTGTTACGTATCACCATCAGCCTCACGATTTTAAAACGCGTTTATTAGAGAGAGGCTTCCACACCCTTATGAGGAATGCTTGAATCTCCTCTCCAACGTATGTGGGATCTCGCGTTTATGAAGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCTTCAACAGATGTGGGATCTCGCTTTTATTAAGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCATTCTCCTCTCCAACCGATGTGGGTCTCATAGTAGTTGTCCGGTGAGCCCAACCAGCGTTAGAAAAAGAAGCCGGGAGAGTTGAAAAAGGGTTAAAAAATAGGATGTAAACTGAAAGCATTTAAGTTAATATTTGCTCATAAAGGAATCCTTATGGCTTATCTTTGATGTTTGAGCTTTCAGGTGGAGGGGCCAAAGGATGCAGCGGCCTCTGGGTTGGGTTACCTCAATTTCCCAATGGAGATTTCATGAATCATTTTGGAGGAAGGTGAGGGTTTTTAATTGTTGTACTGAATGGTCTGGTTTTAAGCGCAATGTAAATATGAGTCTTCAATGTACATACAGCCACCAACTGTTCTGCTTCTGCTTTTGTTTAATCAAAGTGGTGTCTTCAATACGAGTCCTCAAATCATTAGAAATCATGAAAT ATGTTGGGAATATTCAGCAGTTCGATCATGTCACCGCCGGACGAGCTGGTGGCCGCCGGCTGCCGGACTCCATCGCCGAAGATTTCTTCGACGGCGCTGGCGAAGCGGTTCGTGGATACCAACGCCGCCGCCATCTCTGTTCAGATCGGCGACCATGTTCATCTCGCCTTCACTCACCACAACGAATCTCCTCTGCGCCCCAGATCGTTTGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCCCTAGACAATTTGGGAAGCTTAAGGAACCAATACGGTCTTCCTAAATCCACCAATGAAGGTCTCTTAATCATAGAGGCTTACAAAGCTCTCCGTGATCGAGCTCCATATCCGGCCAACCATGTCGTCAGCCATCTTAGCGGCAGTTTCGCTTTCGTCCTCTTCGACAATTCCACCTCCACTCTCTTTGTCGCCTCTGATCAGTTCGGGAAAGTGCCTTTGTTTTGGGGAATCACTGCCGATGGATACATTGCGTTCGCCGATGATGCAGGTCTCCTCAAAAGCGCTTGTGGAAAATCCCTCGCTTCGTTTCCTCAAGGCTGTTTCTTCTCCACGGCGGAGGGTGAATTGAGATGCTATGAGAATCCGAAGAACAAGATTACTGCTGAGCCTGCTCCTGAGGAAGAGATCTGGGGTGCGAAATTCAAGGTGGAGGGGCCAAAGGATGCAGCGGCCTCTGGGTTGGGTTACCTCAATTTCCCAATGGAGATTTCATGAATCATTTTGGAGGAAGGTGAGGGTTTTTAATTGTTGTACTGAATGGTCTGGTTTTAAGCGCAATGTAAATATGAGTCTTCAATGTACATACAGCCACCAACTGTTCTGCTTCTGCTTTTGTTTAATCAAAGTGGTGTCTTCAATACGAGTCCTCAAATCATTAGAAATCATGAAAT ATGTTGGGAATATTCAGCAGTTCGATCATGTCACCGCCGGACGAGCTGGTGGCCGCCGGCTGCCGGACTCCATCGCCGAAGATTTCTTCGACGGCGCTGGCGAAGCGGTTCGTGGATACCAACGCCGCCGCCATCTCTGTTCAGATCGGCGACCATGTTCATCTCGCCTTCACTCACCACAACGAATCTCCTCTGCGCCCCAGATCGTTTGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCCCTAGACAATTTGGGAAGCTTAAGGAACCAATACGGTCTTCCTAAATCCACCAATGAAGGTCTCTTAATCATAGAGGCTTACAAAGCTCTCCGTGATCGAGCTCCATATCCGGCCAACCATGTCGTCAGCCATCTTAGCGGCAGTTTCGCTTTCGTCCTCTTCGACAATTCCACCTCCACTCTCTTTGTCGCCTCTGATCAGTTCGGGAAAGTGCCTTTGTTTTGGGGAATCACTGCCGATGGATACATTGCGTTCGCCGATGATGCAGGTCTCCTCAAAAGCGCTTGTGGAAAATCCCTCGCTTCGTTTCCTCAAGGCTGTTTCTTCTCCACGGCGGAGGGTGAATTGAGATGCTATGAGAATCCGAAGAACAAGATTACTGCTGAGCCTGCTCCTGAGGAAGAGATCTGGGGTGCGAAATTCAAGGTGGAGGGGCCAAAGGATGCAGCGGCCTCTGGGTTGGGTTACCTCAATTTCCCAATGGAGATTTCATGA MLGIFSSSIMSPPDELVAAGCRTPSPKISSTALAKRFVDTNAAAISVQIGDHVHLAFTHHNESPLRPRSFAVKEEIFCLFEGALDNLGSLRNQYGLPKSTNEGLLIIEAYKALRDRAPYPANHVVSHLSGSFAFVLFDNSTSTLFVASDQFGKVPLFWGITADGYIAFADDAGLLKSACGKSLASFPQGCFFSTAEGELRCYENPKNKITAEPAPEEEIWGAKFKVEGPKDAAASGLGYLNFPMEIS Homology
BLAST of Carg15922 vs. NCBI nr
Match: KAG7026254.1 (Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-138 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Carg15922 vs. NCBI nr
Match: XP_022930453.1 (stem-specific protein TSJT1-like [Cucurbita moschata]) HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136 Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Carg15922 vs. NCBI nr
Match: XP_023514226.1 (stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 495.4 bits (1274), Expect = 2.9e-136 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Carg15922 vs. NCBI nr
Match: KAG6593912.1 (Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 477.2 bits (1227), Expect = 8.3e-131 Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of Carg15922 vs. NCBI nr
Match: XP_022959387.1 (stem-specific protein TSJT1-like isoform X2 [Cucurbita moschata] >KAG6575011.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013582.1 Stem-specific protein TSJT1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126 Identity = 220/247 (89.07%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.5e-29 Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy Swiss-Prot
Match: Q5ZJU3 (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus OX=9031 GN=ASNS PE=2 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05 Identity = 37/127 (29.13%), Postives = 59/127 (46.46%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy Swiss-Prot
Match: P49088 (Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3) HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05 Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy Swiss-Prot
Match: Q61024 (Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3) HSP 1 Score: 50.1 bits (118), Expect = 4.3e-05 Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy Swiss-Prot
Match: P19891 (Asparagine synthetase [glutamine-hydrolyzing] OS=Cricetulus griseus OX=10029 GN=ASNS PE=2 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 7.3e-05 Identity = 29/110 (26.36%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy TrEMBL
Match: A0A6J1EV81 (stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111436894 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 6.4e-137 Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy TrEMBL
Match: A0A6J1H4E0 (stem-specific protein TSJT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460374 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126 Identity = 220/247 (89.07%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy TrEMBL
Match: A0A6J1CAR8 (stem-specific protein TSJT1-like OS=Momordica charantia OX=3673 GN=LOC111009531 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 5.1e-126 Identity = 220/247 (89.07%), Postives = 233/247 (94.33%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy TrEMBL
Match: A0A0A0KDR1 (Glutamine amidotransferase type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G154500 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125 Identity = 220/247 (89.07%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of Carg15922 vs. ExPASy TrEMBL
Match: A0A1S3C892 (stem-specific protein TSJT1-like OS=Cucumis melo OX=3656 GN=LOC103497929 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125 Identity = 220/247 (89.07%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of Carg15922 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 365.2 bits (936), Expect = 4.3e-101 Identity = 173/228 (75.88%), Postives = 198/228 (86.84%), Query Frame = 0
BLAST of Carg15922 vs. TAIR 10
Match: AT5G19140.2 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 334.3 bits (856), Expect = 8.1e-92 Identity = 162/228 (71.05%), Postives = 187/228 (82.02%), Query Frame = 0
BLAST of Carg15922 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 195.7 bits (496), Expect = 4.5e-50 Identity = 93/229 (40.61%), Postives = 141/229 (61.57%), Query Frame = 0
BLAST of Carg15922 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 178.7 bits (452), Expect = 5.7e-45 Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 0
BLAST of Carg15922 vs. TAIR 10
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 174.9 bits (442), Expect = 8.2e-44 Identity = 95/232 (40.95%), Postives = 132/232 (56.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|