Carg15890 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCTGTTCCTCTCGTTCTCCTTAGTTAGCTTCTGCGCTTCCAGCAATTCACAAAAATACGCTTAAAAGTTCGGATTTTGAAGAAGGGAAGCGGCGCTCCGCCGATTCTACCCTTCCTCCGGCACCGGATTGACCGCTCTTTCTTTCTCTGTAGTTTCTATCTGCCCCACCAGTTTCACTGCACATAAATCGACTAGGGAGTATCAATGGCGGAAGCAGAGACAGGATCAGCTACAGGCAGCAGTGGCGGAAGAGCGGAGGCGTCGCTGAAGGACAAGGGCAATGAGTTTTTCAAAGCAGGAAACTATCTCAAAGCGGCTGCACTTTACACTCAGGCTATCAAGCTAGACCCTTCGAATCATGCTCTTTATAGGTATATTACTCTTTCCCTTTTCTTTTGCTTGATACTGTTTTCGTAATTATTAAGAATGTTACTCTCGTGTGTTCTTTGCACTATTTGATTGATTGTGAATACAATGTTTCTCCTGATCTGGATGTTACCTTAGTCGAGAGCTCAATTATTGACTCCCGGTAGCTCATCAACACTGATTAGGTTATAGAATATCACCATGGCCTAGTGGTCAATAAAGGCTAATGTAAGTAGTACAAGTGATATGAACCAACGCGGCATCTCAATCATGCAATATTAATATCAATCAAGATTCATTCAAGTAGGGCTTCATTTATTCATAATTTAGTATTTGGATATTCGTGAATGTATTTTGAGACTTTTATTTATTTAAAGTTACATTTATAGTGGTTAATTATTGTCATAAAGTATGAAAGTTACGACTCTTCGAATGCCTCATAGAAGGTTAAGGGTTTTCATTTTGAGGCTATATAAAGTCATGTTATCATTGTAAGGGAAACTTGGAAAATGTAGTCAAAGGAGCCGGCTAAGTTTCTTTGCGATTCTATGTAGTTTAGGTTGCATGTAGAATTATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAATGTTCTTGCCTTGAGATATTTGATCAACAAGGTAATCCGAATCTTACTTCCCTTGTAGTGATTATGTGCAAGTTGGCTTGGTCAGCCGTGGATATAAAAGAAAAACGAGATTAGGCTATTGAATTTACGACAGTCTAGTCTGTAAGAAGAAGAAAGTTGCATACTCATGCATAGTATTTGAGAAACATAGGCCAACATCCACTTTTCAGTCAGCTGCAAAACCCTTTTCTGAATTGGAGGAATTATAAGGAACTCATGCCCACTTGCAATCAAACTGGAATTACAAAGAAAATTAAGGAAAAACTGAAGTTTCCTTTATTTGTTGTGGTGAATTACACTTGTCCATTTGCCTAATTTTGATCATTGGCTGGCAGCACACGAGACGACGAGACAATGGATAGTTTTAAAATATTTGTGCTTCGTTACGATATGCTTGTACAAAGTATAAGTTGAGCTGATATATTTTCGGTTTTCCAGCAATCGTGCTGCTGCCTTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCCGACGCTGAGATGACAATTTCATTGAACCCACAATGGGAAAAGGTAACAAATTCCATTCCATGTATTGTTTGAGCCAGATCCTTTTCAGTTCCGTTCATTCAGTCTCTGCAGTTTTGATATGCCACAGGGATATTTCAGAAAGGGATGCGTTTTGGAAGCCATGGAAAAATATGACGATGTATGTTGAATGCTTCCTTTGCAACGTTCGTGTCAATGACGTACATAATATTTTACTAACTATGGCTGAATTCATCTGATAGTTCAAACGTTCTTGTTGTAGGCATTGTCTGCATTTCAAGCCGCCTTACGGTACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATCAAAAGGGTTTCACAGTTAGTGAAAGATAAAATGAGAGCCCAAGAGGTGGAGAACAAGAGATCAAATATAGATATGAAGAAGCACTTGGATAAGCTGAAATCTGAACTGGTGAGTTGCATTCATCCAACCGAGGCTCATTTCACAGCATATACTGTAATAGGTTATGAAAATAGCAATTTTCCACGTTTCGATTCTCTAGAGATGAATTTACTCTTGAATTAGCCCTCCCGACGTGTATGGATAACCATCGCTTTCTATTTGCAGTCTGACAAATATGGCTCGGAAGAAGGCTGCAAAGACGTATTTTCTTTTCTTGTTGAGACAATGGAGGCTGCTGTGAGATCATGGCATGAAACTTCCAATGTGGATGCTAAAGTGTACTATTTACTCGATAAGGAAAAGACGGATACCGAAAAATATGCTCCAATTGTTAACATTGATAAGGTGTTCGCCGTCTACCGTTATTCTCAAAACTCGAATATTGAGTCTGAACTGTTTATTTGTTTCCTAGAAGAAACAGTGTAACCATTATATACCAACCATTCCTGTTTTTTATGCAATGCAGGCATTTGAATCGCCTCACACGCATGGTGATTGTTTTCAGTTCTTAAGGAAATATGCCGAGGATTCAGTCGCCCGAGCAGCATGCTTAGTTGCTCCCAAAAGCTTGATATCTTACCCACAGGTGAGGTTTAATGTCTTTGTTTCTACATAGGAAAGATATAATATATCCATAAAACTCCATTTTTACATCTATCTTCATCTCCTCTAACTCCCTCTGTTCATAAACAACTTTTTTGTCACTATTCTAATAGTATTCCTAGGAACCTTCAGTTGTGCAAAAATTCTTGTTTGCAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAGCATGATGGTTTCTTTGTTCAGCTTGAAACTCCTTCCCTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGACGACCATTGTGCCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGCTACACTTAGTGTTTTTCATGCATATAAATTGCACTTGTTCTATGCAAAACTGCCATCAAGGAACACGATCATCTTAAACGTTTCTTTTGCCTCAATTCTACGTCTGGGTTGCATAATTTTATTTGACATGGAAGGTTTCCCCCATTTTCGTGTGTTTTTCATGTGGTTTTTTAACCTCAGTTCGATTGCAACCTGTCGTTTTCTTTACCATAAAGCAATTGCAAGATGATCTCCATGGACAAGAATCAAGCTCTGTACAAAACTGTGGTTTATGCGAACGATTTATCTATCATCCTTTGTTAATTAACTACTTCTATGGTTTGTTGGATTTTTCTCATCTATAGACTGTAATATCAACGTTTTAGTAACTTTGAGATCGGTATCCATGGTCACAGCATTCATGTCTTATTTTTCAGGGATCCTGAGGTTCTGGATATCGGTGCACATGAACTAATACCGCGCATATTTAAAGAAAAGCTGTCGAGCACTTAG CCCTGTTCCTCTCGTTCTCCTTAGTTAGCTTCTGCGCTTCCAGCAATTCACAAAAATACGCTTAAAAGTTCGGATTTTGAAGAAGGGAAGCGGCGCTCCGCCGATTCTACCCTTCCTCCGGCACCGGATTGACCGCTCTTTCTTTCTCTGTAGTTTCTATCTGCCCCACCAGTTTCACTGCACATAAATCGACTAGGGAGTATCAATGGCGGAAGCAGAGACAGGATCAGCTACAGGCAGCAGTGGCGGAAGAGCGGAGGCGTCGCTGAAGGACAAGGGCAATGAGTTTTTCAAAGCAGGAAACTATCTCAAAGCGGCTGCACTTTACACTCAGGCTATCAAGCTAGACCCTTCGAATCATGCTCTTTATAGCAATCGTGCTGCTGCCTTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCCGACGCTGAGATGACAATTTCATTGAACCCACAATGGGAAAAGGGATATTTCAGAAAGGGATGCGTTTTGGAAGCCATGGAAAAATATGACGATGCATTGTCTGCATTTCAAGCCGCCTTACGGTACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATCAAAAGGGTTTCACAGTTAGTGAAAGATAAAATGAGAGCCCAAGAGGTGGAGAACAAGAGATCAAATATAGATATGAAGAAGCACTTGGATAAGCTGAAATCTGAACTGTCTGACAAATATGGCTCGGAAGAAGGCTGCAAAGACGTATTTTCTTTTCTTGTTGAGACAATGGAGGCTGCTGTGAGATCATGGCATGAAACTTCCAATGTGGATGCTAAAGTGTACTATTTACTCGATAAGGAAAAGACGGATACCGAAAAATATGCTCCAATTGTTAACATTGATAAGTGTAACCATTATATACCAACCATTCCTGTTTTTTATGCAATGCAGGCATTTGAATCGCCTCACACGCATGGTGATTGTTTTCAGTTCTTAAGGAAATATGCCGAGGATTCAGTCGCCCGAGCAGCATGCTTAGTTGCTCCCAAAAGCTTGATATCTTACCCACAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAGCATGATGGTTTCTTTGTTCAGCTTGAAACTCCTTCCCTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGACGACCATTGTGCCGGGATCCTGAGGTTCTGGATATCGGTGCACATGAACTAATACCGCGCATATTTAAAGAAAAGCTGTCGAGCACTTAG ATGGCGGAAGCAGAGACAGGATCAGCTACAGGCAGCAGTGGCGGAAGAGCGGAGGCGTCGCTGAAGGACAAGGGCAATGAGTTTTTCAAAGCAGGAAACTATCTCAAAGCGGCTGCACTTTACACTCAGGCTATCAAGCTAGACCCTTCGAATCATGCTCTTTATAGCAATCGTGCTGCTGCCTTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCCGACGCTGAGATGACAATTTCATTGAACCCACAATGGGAAAAGGGATATTTCAGAAAGGGATGCGTTTTGGAAGCCATGGAAAAATATGACGATGCATTGTCTGCATTTCAAGCCGCCTTACGGTACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATCAAAAGGGTTTCACAGTTAGTGAAAGATAAAATGAGAGCCCAAGAGGTGGAGAACAAGAGATCAAATATAGATATGAAGAAGCACTTGGATAAGCTGAAATCTGAACTGTCTGACAAATATGGCTCGGAAGAAGGCTGCAAAGACGTATTTTCTTTTCTTGTTGAGACAATGGAGGCTGCTGTGAGATCATGGCATGAAACTTCCAATGTGGATGCTAAAGTGTACTATTTACTCGATAAGGAAAAGACGGATACCGAAAAATATGCTCCAATTGTTAACATTGATAAGTGTAACCATTATATACCAACCATTCCTGTTTTTTATGCAATGCAGGCATTTGAATCGCCTCACACGCATGGTGATTGTTTTCAGTTCTTAAGGAAATATGCCGAGGATTCAGTCGCCCGAGCAGCATGCTTAGTTGCTCCCAAAAGCTTGATATCTTACCCACAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAGCATGATGGTTTCTTTGTTCAGCTTGAAACTCCTTCCCTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGACGACCATTGTGCCGGGATCCTGAGGTTCTGGATATCGGTGCACATGAACTAATACCGCGCATATTTAAAGAAAAGCTGTCGAGCACTTAG MAEAETGSATGSSGGRAEASLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTISLNPQWEKGYFRKGCVLEAMEKYDDALSAFQAALRYNPQSAEVSRKIKRVSQLVKDKMRAQEVENKRSNIDMKKHLDKLKSELSDKYGSEEGCKDVFSFLVETMEAAVRSWHETSNVDAKVYYLLDKEKTDTEKYAPIVNIDKCNHYIPTIPVFYAMQAFESPHTHGDCFQFLRKYAEDSVARAACLVAPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSNELGRPLCRDPEVLDIGAHELIPRIFKEKLSST Homology
BLAST of Carg15890 vs. NCBI nr
Match: KAG7026223.1 (Hsp70-Hsp90 organizing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 696.0 bits (1795), Expect = 1.6e-196 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
BLAST of Carg15890 vs. NCBI nr
Match: KAG6593878.1 (Hsp70-Hsp90 organizing protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 651.4 bits (1679), Expect = 4.5e-183 Identity = 329/346 (95.09%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Carg15890 vs. NCBI nr
Match: XP_022930514.1 (serine/threonine-protein phosphatase 5-like [Cucurbita moschata]) HSP 1 Score: 647.9 bits (1670), Expect = 5.0e-182 Identity = 328/346 (94.80%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Carg15890 vs. NCBI nr
Match: XP_023515089.1 (RNA polymerase II-associated protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 644.0 bits (1660), Expect = 7.2e-181 Identity = 326/346 (94.22%), Postives = 328/346 (94.80%), Query Frame = 0
BLAST of Carg15890 vs. NCBI nr
Match: XP_023000241.1 (serine/threonine-protein phosphatase 5-like [Cucurbita maxima]) HSP 1 Score: 642.9 bits (1657), Expect = 1.6e-180 Identity = 325/346 (93.93%), Postives = 328/346 (94.80%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy Swiss-Prot
Match: Q7ZWU1 (Stress-induced-phosphoprotein 1 OS=Xenopus laevis OX=8355 GN=stip1 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19 Identity = 47/120 (39.17%), Postives = 72/120 (60.00%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy Swiss-Prot
Match: Q9LNB6 (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.2e-18 Identity = 47/117 (40.17%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy Swiss-Prot
Match: Q9STH1 (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.1e-17 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy Swiss-Prot
Match: Q5XEP2 (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-16 Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy Swiss-Prot
Match: Q43468 (Hsp70-Hsp90 organizing protein 1 OS=Glycine max OX=3847 GN=HOP1 PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy TrEMBL
Match: A0A6J1ERM7 (serine/threonine-protein phosphatase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111436945 PE=4 SV=1) HSP 1 Score: 647.9 bits (1670), Expect = 2.4e-182 Identity = 328/346 (94.80%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy TrEMBL
Match: A0A6J1KFC1 (serine/threonine-protein phosphatase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111494522 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 7.7e-181 Identity = 325/346 (93.93%), Postives = 328/346 (94.80%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy TrEMBL
Match: A0A0A0LNU0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G223130 PE=4 SV=1) HSP 1 Score: 605.9 bits (1561), Expect = 1.0e-169 Identity = 306/346 (88.44%), Postives = 316/346 (91.33%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy TrEMBL
Match: A0A1S3BME6 (stress-induced-phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103491237 PE=4 SV=1) HSP 1 Score: 600.1 bits (1546), Expect = 5.7e-168 Identity = 302/346 (87.28%), Postives = 316/346 (91.33%), Query Frame = 0
BLAST of Carg15890 vs. ExPASy TrEMBL
Match: A0A6J1H534 (RNA polymerase II-associated protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460130 PE=4 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164 Identity = 301/346 (86.99%), Postives = 313/346 (90.46%), Query Frame = 0
BLAST of Carg15890 vs. TAIR 10
Match: AT1G04190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 484.6 bits (1246), Expect = 6.8e-137 Identity = 243/346 (70.23%), Postives = 284/346 (82.08%), Query Frame = 0
BLAST of Carg15890 vs. TAIR 10
Match: AT1G12270.1 (stress-inducible protein, putative ) HSP 1 Score: 93.2 bits (230), Expect = 4.4e-19 Identity = 47/117 (40.17%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Carg15890 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative ) HSP 1 Score: 92.4 bits (228), Expect = 7.5e-19 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of Carg15890 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative ) HSP 1 Score: 92.4 bits (228), Expect = 7.5e-19 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of Carg15890 vs. TAIR 10
Match: AT1G62740.1 (stress-inducible protein, putative ) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17 Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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