Carg15889 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15889
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein IQ-DOMAIN 14-like
Location	Carg_Chr08: 6934333 .. 6935122 (+)
RNA-Seq Expression	Carg15889
Synteny	Carg15889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCATTGATCATGGCTCAGGCTCGAGCTCGTGCCGAACGGATCAGGATGATCGAAGGGAAAAACCCTTCGGTTAACAAAGATCACTTTGGTTATACTGATCATGTAAGTATCCTTCTTTTGCGCTTAACTTGAACATTGCTTGAAACATCAGTAAAGTAGGAACTTCAACAAACCCATTTCAATATTCTGAATGAAGGTTGCAGAGGAAAACATTAAGATTGTGGAGATGGATCATGGAGAGAGTATACGAGGCTCGAAGAACAGGACAAGAGATGAACGTAGGTTCACACATCAAGCACACCTTGTCTCACTAGTACCATCTACTCAAACCGACATCGACCCACGAGGTTGCAGTCGTCATTTCGAGGACCCACAAGATTCCACAACAAATTGTATGCAGTCTCTGTCTTTTGAGTATCCAATGTTCCCAAGTTACATGGCCAATACACAATCTTCAAGAGCCAAAGTACGGTCACAGAGTGCGCCAAAGACGAGGCCCGAATCATTTGAGAGACAATCAAGCAGAAGGCGGGCACCAACTGAGCGATCGTCGTCTTCTCATATGGGCTGTGCACCTCAAGACTTCCAGTATCCATGGACAATGAAGCTTGCCAAGTCTGCAAGTTCAGTCAATAATAGTGAATGTGGTTCCACATGTACAGTGCTCACAAGTACCAACTACAGATCTCTTGTTGCATGTGAAGTAAGAAAAGTTCCTGACTGCCACTGTCAGGAACCACTCTGTACAGTGGTTCCATGTTTAGAATTCAAGGACAGGAAATGA

mRNA sequence

ATGCAAGCATTGATCATGGCTCAGGCTCGAGCTCGTGCCGAACGGATCAGGATGATCGAAGGGAAAAACCCTTCGGTTAACAAAGATCACTTTGGTTATACTGATCATGTTGCAGAGGAAAACATTAAGATTGTGGAGATGGATCATGGAGAGAGTATACGAGGCTCGAAGAACAGGACAAGAGATGAACGTAGGTTCACACATCAAGCACACCTTGTCTCACTAGTACCATCTACTCAAACCGACATCGACCCACGAGGTTGCAGTCGTCATTTCGAGGACCCACAAGATTCCACAACAAATTGTATGCAGTCTCTGTCTTTTGAGTATCCAATGTTCCCAAGTTACATGGCCAATACACAATCTTCAAGAGCCAAAGTACGGTCACAGAGTGCGCCAAAGACGAGGCCCGAATCATTTGAGAGACAATCAAGCAGAAGGCGGGCACCAACTGAGCGATCGTCGTCTTCTCATATGGGCTGTGCACCTCAAGACTTCCAGTATCCATGGACAATGAAGCTTGCCAAGTCTGCAAGTTCAGTCAATAATAGTGAATGTGGTTCCACATGTACAGTGCTCACAAGTACCAACTACAGATCTCTTGTTGCATGTGAAGTAAGAAAAGTTCCTGACTGCCACTGTCAGGAACCACTCTGTACAGTGGTTCCATGTTTAGAATTCAAGGACAGGAAATGA

Coding sequence (CDS)

ATGCAAGCATTGATCATGGCTCAGGCTCGAGCTCGTGCCGAACGGATCAGGATGATCGAAGGGAAAAACCCTTCGGTTAACAAAGATCACTTTGGTTATACTGATCATGTTGCAGAGGAAAACATTAAGATTGTGGAGATGGATCATGGAGAGAGTATACGAGGCTCGAAGAACAGGACAAGAGATGAACGTAGGTTCACACATCAAGCACACCTTGTCTCACTAGTACCATCTACTCAAACCGACATCGACCCACGAGGTTGCAGTCGTCATTTCGAGGACCCACAAGATTCCACAACAAATTGTATGCAGTCTCTGTCTTTTGAGTATCCAATGTTCCCAAGTTACATGGCCAATACACAATCTTCAAGAGCCAAAGTACGGTCACAGAGTGCGCCAAAGACGAGGCCCGAATCATTTGAGAGACAATCAAGCAGAAGGCGGGCACCAACTGAGCGATCGTCGTCTTCTCATATGGGCTGTGCACCTCAAGACTTCCAGTATCCATGGACAATGAAGCTTGCCAAGTCTGCAAGTTCAGTCAATAATAGTGAATGTGGTTCCACATGTACAGTGCTCACAAGTACCAACTACAGATCTCTTGTTGCATGTGAAGTAAGAAAAGTTCCTGACTGCCACTGTCAGGAACCACTCTGTACAGTGGTTCCATGTTTAGAATTCAAGGACAGGAAATGA

Protein sequence

MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRTRDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANTQSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASSVNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK

Homology

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BLAST of Carg15889 vs. NCBI nr
Match: KAG7026222.1 (hypothetical protein SDJN02_12721, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT
Sbjct: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK
Sbjct: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 231

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BLAST of Carg15889 vs. NCBI nr
Match: KAG6593877.1 (Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFERQSSRRRAPTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 387

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BLAST of Carg15889 vs. NCBI nr
Match: XP_023000240.1 (uncharacterized protein LOC111494521 [Cucurbita maxima])

HSP 1 Score: 447.2 bits (1149), Expect = 8.6e-122
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEEN+KIVEMDHGE IRGSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENVKIVEMDHGECIRGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           R ERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RHERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFE+QSSRRRAPTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFEKQSSRRRAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQE LCTVVPCLEFKDRK
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQESLCTVVPCLEFKDRK 387

[Close]

BLAST of Carg15889 vs. NCBI nr
Match: XP_022930512.1 (uncharacterized protein LOC111436944 [Cucurbita moschata])

HSP 1 Score: 441.8 bits (1135), Expect = 3.6e-120
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFG TDHVAEE IKIVEMDHGESIRGSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKDHFGCTDHVAEEKIKIVEMDHGESIRGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           R ERRFTHQAHLVSLVPST+TDIDP+GCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RHERRFTHQAHLVSLVPSTRTDIDPQGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFERQSSRR APTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFERQSSRRWAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 387

[Close]

BLAST of Carg15889 vs. NCBI nr
Match: XP_023515088.1 (uncharacterized protein LOC111779223 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.7 bits (1132), Expect = 8.0e-120
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNK+HFG TDHVAEENIKIVEMDHGE I+GSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKNHFGCTDHVAEENIKIVEMDHGECIQGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           R ERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RHERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFERQSSRRRAPTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQE LCTVVPCLEFKD+K
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQESLCTVVPCLEFKDKK 387

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BLAST of Carg15889 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 101/241 (41.91%), Postives = 126/241 (52.28%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEG--KNP--SVNKDHFGYTDHVAEENIKIVEMDHGESIRGS 60
           MQALI  QA+AR +RIRMI G   NP  S++K       H  EENIKIVEMD        
Sbjct: 212 MQALITLQAKAREQRIRMIGGDSTNPRTSIHKTRINNFYHENEENIKIVEMD-------- 271

Query: 61  KNRTRDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFED-----PQDSTTNCMQSL----- 120
                       Q+ + S  PS  T++ PR  S HFED        S+  C         
Sbjct: 272 -----------IQSKMYSPAPSALTEMSPRAYSSHFEDCNSFNTAQSSPQCFSRFKEYYN 331

Query: 121 -----SFEYPMFPSYMANTQSSRAKVRSQSAPKTR-PESFERQ-SSRRRAPTE------- 180
                S++YP+FP+YMANTQSS+AK RSQSAPK R PE +E+Q S RRR+  E       
Sbjct: 332 GDTLSSYDYPLFPNYMANTQSSKAKARSQSAPKQRPPEIYEKQMSGRRRSSMEAPRNNGV 391

Query: 181 ------RSSSSHMG--CAPQDFQ------YPW-TMKLAKSASSVNNSECGSTCTVLTSTN 199
                 + SSS +G   A +  Q      YPW  +KL +S  S+  SECGST TV+T+TN
Sbjct: 392 PRAVRMQRSSSQLGSNTAKESQQHHHHQYYPWMAIKLDRSNISLMESECGSTSTVMTNTN 433

[Close]

BLAST of Carg15889 vs. ExPASy TrEMBL
Match: A0A6J1KHT1 (uncharacterized protein LOC111494521 OS=Cucurbita maxima OX=3661 GN=LOC111494521 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.2e-122
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEEN+KIVEMDHGE IRGSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENVKIVEMDHGECIRGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           R ERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RHERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFE+QSSRRRAPTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFEKQSSRRRAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQE LCTVVPCLEFKDRK
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQESLCTVVPCLEFKDRK 387

[Close]

BLAST of Carg15889 vs. ExPASy TrEMBL
Match: A0A6J1EQR0 (uncharacterized protein LOC111436944 OS=Cucurbita moschata OX=3662 GN=LOC111436944 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.7e-120
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALIMAQARARAERIRMIEGKNPSVNKDHFG TDHVAEE IKIVEMDHGESIRGSKNRT
Sbjct: 158 MQALIMAQARARAERIRMIEGKNPSVNKDHFGCTDHVAEEKIKIVEMDHGESIRGSKNRT 217

Query: 61  RDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 120
           R ERRFTHQAHLVSLVPST+TDIDP+GCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT
Sbjct: 218 RHERRFTHQAHLVSLVPSTRTDIDPQGCSRHFEDPQDSTTNCMQSLSFEYPMFPSYMANT 277

Query: 121 QSSRAKVRSQSAPKTRPESFERQSSRRRAPTERSSSSHMGCAPQDFQYPWTMKLAKSASS 180
           QSSRAKVRSQSAPKTRPESFERQSSRR APTER SSSHMGCAPQDFQYPWTMKLAKSASS
Sbjct: 278 QSSRAKVRSQSAPKTRPESFERQSSRRWAPTER-SSSHMGCAPQDFQYPWTMKLAKSASS 337

Query: 181 VNNSECGSTCTVLTSTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 232
           VNNSECGSTCTVLT+TNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK
Sbjct: 338 VNNSECGSTCTVLTNTNYRSLVACEVRKVPDCHCQEPLCTVVPCLEFKDRK 387

[Close]

BLAST of Carg15889 vs. ExPASy TrEMBL
Match: A0A6J1L2Z1 (protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111499373 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.5e-66
Identity = 155/246 (63.01%), Postives = 170/246 (69.11%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKNPSVNKDHFGYTDHVAEENIKIVEMDHGESIRGSKNRT 60
           MQALI AQARARA+RIRMI+G   SV  DHFGY +HV+EENIKIVEMDHGE   GSKNRT
Sbjct: 182 MQALITAQARARAQRIRMIDGMKGSVGDDHFGYGNHVSEENIKIVEMDHGEYKPGSKNRT 241

Query: 61  ------RDERRF-------THQAHLVSLVPSTQTDIDPRGCSRHFED---------PQ-- 120
                 + ERRF       TH +HLVS VPS  TDID RGCS HFED         PQ  
Sbjct: 242 SYVSDQQHERRFRTDHVFATHHSHLVSQVPSDLTDIDARGCSSHFEDYSICTIQSSPQDY 301

Query: 121 ------DSTTNCMQSLSFEYPMFPSYMANTQSSRAKVRSQSAPKTRPESFERQSSRRRAP 180
                 D T  CMQSLSFEYPMFPSYMANT+SSRAK RSQSAPKTRP SFERQ SRR+A 
Sbjct: 302 LVKSKPDPTPECMQSLSFEYPMFPSYMANTESSRAKTRSQSAPKTRPASFERQPSRRKAS 361

Query: 181 TE-----------RSSSSHMGCAPQDFQYPWTMKLAKSASSVNNSECGSTCTVLTSTNYR 206
           T+           + SSS +GC  QD Q+P  MKL KS  S++NSECGST TVLT+TNYR
Sbjct: 362 TDGKNVPKAAVLIKRSSSFVGCGTQDLQFPLLMKLDKSTGSLHNSECGSTSTVLTNTNYR 421

[Close]

BLAST of Carg15889 vs. ExPASy TrEMBL
Match: A0A5D3E3I4 (Protein IQ-DOMAIN 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001250 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 155/253 (61.26%), Postives = 170/253 (67.19%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKN-----------PSVNKDHFGYTDHVAEENIKIVEMDH 60
           MQALI AQARARA+RI+MIE  N            SVN+DHFGY +H AEENIKIVEMDH
Sbjct: 180 MQALITAQARARAQRIKMIEATNNLSYQRQPFLAESVNEDHFGYANHAAEENIKIVEMDH 239

Query: 61  GESIRGSKNRTRDERRF-THQAHLVSLVPSTQTDIDPRGCSRHFED---------PQD-- 120
            E  RGSKNRT  E+ F TH  H VS VPS  TDID RGCS HFED         PQD  
Sbjct: 240 VEYKRGSKNRTSYEQVFATHHPHHVSQVPSALTDIDARGCSGHFEDYSICTVQSSPQDYL 299

Query: 121 ---------------STTNCMQSLSFEYPMFPSYMANTQSSRAKVRSQSAPKTRPESFER 180
                          ST  C+QS+SFEYPMFPSYMANT+SSRAK RSQSAPKTRPESFER
Sbjct: 300 AKSKPDPSKSSPIGFSTRECIQSMSFEYPMFPSYMANTESSRAKARSQSAPKTRPESFER 359

Query: 181 QSSRRRAPTE----------RSSSSHMGCAPQDFQYPWTMKLAKSASSVNNSECGSTCTV 206
           Q SRR+A TE          + S+S +GCA QD QYP  M+L KS SS+NNSECGST TV
Sbjct: 360 QPSRRKASTEGKSIPKAMQIQRSASLVGCAAQDLQYPLLMRLDKSTSSLNNSECGSTSTV 419

[Close]

BLAST of Carg15889 vs. ExPASy TrEMBL
Match: A0A1S3BLS5 (uncharacterized protein LOC103491236 OS=Cucumis melo OX=3656 GN=LOC103491236 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 155/253 (61.26%), Postives = 170/253 (67.19%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEGKN-----------PSVNKDHFGYTDHVAEENIKIVEMDH 60
           MQALI AQARARA+RI+MIE  N            SVN+DHFGY +H AEENIKIVEMDH
Sbjct: 203 MQALITAQARARAQRIKMIEATNNLSYQRQPFLAESVNEDHFGYANHAAEENIKIVEMDH 262

Query: 61  GESIRGSKNRTRDERRF-THQAHLVSLVPSTQTDIDPRGCSRHFED---------PQD-- 120
            E  RGSKNRT  E+ F TH  H VS VPS  TDID RGCS HFED         PQD  
Sbjct: 263 VEYKRGSKNRTSYEQVFATHHPHHVSQVPSALTDIDARGCSGHFEDYSICTVQSSPQDYL 322

Query: 121 ---------------STTNCMQSLSFEYPMFPSYMANTQSSRAKVRSQSAPKTRPESFER 180
                          ST  C+QS+SFEYPMFPSYMANT+SSRAK RSQSAPKTRPESFER
Sbjct: 323 AKSKPDPSKSSPIGFSTRECIQSMSFEYPMFPSYMANTESSRAKARSQSAPKTRPESFER 382

Query: 181 QSSRRRAPTE----------RSSSSHMGCAPQDFQYPWTMKLAKSASSVNNSECGSTCTV 206
           Q SRR+A TE          + S+S +GCA QD QYP  M+L KS SS+NNSECGST TV
Sbjct: 383 QPSRRKASTEGKSIPKAMQIQRSASLVGCAAQDLQYPLLMRLDKSTSSLNNSECGSTSTV 442

[Close]

BLAST of Carg15889 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 101/241 (41.91%), Postives = 126/241 (52.28%), Query Frame = 0


Query: 1   MQALIMAQARARAERIRMIEG--KNP--SVNKDHFGYTDHVAEENIKIVEMDHGESIRGS 60
           MQALI  QA+AR +RIRMI G   NP  S++K       H  EENIKIVEMD        
Sbjct: 153 MQALITLQAKAREQRIRMIGGDSTNPRTSIHKTRINNFYHENEENIKIVEMD-------- 212

Query: 61  KNRTRDERRFTHQAHLVSLVPSTQTDIDPRGCSRHFED-----PQDSTTNCMQSL----- 120
                       Q+ + S  PS  T++ PR  S HFED        S+  C         
Sbjct: 213 -----------IQSKMYSPAPSALTEMSPRAYSSHFEDCNSFNTAQSSPQCFSRFKEYYN 272

Query: 121 -----SFEYPMFPSYMANTQSSRAKVRSQSAPKTR-PESFERQ-SSRRRAPTE------- 180
                S++YP+FP+YMANTQSS+AK RSQSAPK R PE +E+Q S RRR+  E       
Sbjct: 273 GDTLSSYDYPLFPNYMANTQSSKAKARSQSAPKQRPPEIYEKQMSGRRRSSMEAPRNNGV 332

Query: 181 ------RSSSSHMG--CAPQDFQ------YPW-TMKLAKSASSVNNSECGSTCTVLTSTN 199
                 + SSS +G   A +  Q      YPW  +KL +S  S+  SECGST TV+T+TN
Sbjct: 333 PRAVRMQRSSSQLGSNTAKESQQHHHHQYYPWMAIKLDRSNISLMESECGSTSTVMTNTN 374

[Close]

BLAST of Carg15889 vs. TAIR 10
Match: AT4G23060.1 (IQ-domain 22 )

HSP 1 Score: 42.4 bits (98), Expect = 5.9e-04
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 95  PQDSTTNCMQSLSFEYPMFPSYMANTQSSRAKVRSQSAPKTRPESF-ERQSSRR 148
           P D T +C           PSYMA T+SSRAK RS SAPK+RP+ F ER SS+R
Sbjct: 389 PSDCTKSCCDG------DHPSYMACTESSRAKARSASAPKSRPQLFYERPSSKR 436

The following BLAST results are available for this feature:

BLAST of Carg15889 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026222.1	1.2e-126	100.00	hypothetical protein SDJN02_12721, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6593877.1	1.4e-124	99.13	Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023000240.1	8.6e-122	96.97	uncharacterized protein LOC111494521 [Cucurbita maxima]	[more]
XP_022930512.1	3.6e-120	96.54	uncharacterized protein LOC111436944 [Cucurbita moschata]	[more]
XP_023515088.1	8.0e-120	96.10	uncharacterized protein LOC111779223 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15889 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1P8B590	3.2e-26	41.91	Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1	[more]

BLAST of Carg15889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHT1	4.2e-122	96.97	uncharacterized protein LOC111494521 OS=Cucurbita maxima OX=3661 GN=LOC111494521...	[more]
A0A6J1EQR0	1.7e-120	96.54	uncharacterized protein LOC111436944 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]
A0A6J1L2Z1	5.5e-66	63.01	protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111499373 PE=4 SV=1	[more]
A0A5D3E3I4	1.4e-64	61.26	Protein IQ-DOMAIN 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216...	[more]
A0A1S3BLS5	1.4e-64	61.26	uncharacterized protein LOC103491236 OS=Cucumis melo OX=3656 GN=LOC103491236 PE=...	[more]

BLAST of Carg15889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14750.1	2.2e-27	41.91	IQ-domain 19	[more]
AT4G23060.1	5.9e-04	53.70	IQ-domain 22	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025064	Domain of unknown function DUF4005	PFAM	PF13178	DUF4005	coord: 101..155 e-value: 2.6E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..138
None	No IPR available	PANTHER	PTHR32295	IQ-DOMAIN 5-RELATED	coord: 104..189 coord: 1..98
None	No IPR available	PANTHER	PTHR32295:SF208	IQ CALMODULIN-BINDING MOTIF PROTEIN	coord: 104..189 coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15889-RA	Carg15889-RA	mRNA