Carg15856 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATTACAGATAATTTATAGCTATAATTCTCAACTTCACGTCTGAGAATATAGGACGCGCGAAAGCCAGGGGACAAGAAGACTGTCGCGAAGTTTCGGTCACGACCGTAAGGTCCGATCATGTATCACCCTACTAGAGGCGGCGTTCGTGGCGGTCGAGATCGTAAGCTACTTATTTATCTTCCTCGATTTCCACTTTGTTGATTGTTTCCCTTTTTTCGTTATTGATGAATTAGGCTTTCCCGGGATTAGATCAGCGGCTGAGAGTTCGAGAACCGTTGTGGATCTGAATCCGCCATCTAGGGTTTTTGTGCTCTTCCGATATTTGGATACGCGTTTTTTTGTAGGGTGATTGGTATCGTTTCAGAAAATTTTATTAGGGTTTTTGGGATGCTTTTTTCGAATTTAAAGATTTGATATAGCTAGTCAAATGGACATGAAGTTTATGCGTTGTTGAATTAAGATTTTGATGCCTTTATTGTTGGTCTGGCGGTAGTTTATGTGGTTATGTACGTCTATTGTGATGAATGTCGTCAAATGATGGGTCATTAGGATTTTAGGGCTTGTTAGTGTTCGAGTGCCTGTGCTGGATATCTTTTGTTTGTTTGTTTTTTTGTTAATATTCATGTGTTTGTATCGGCAATAGCTTCAAAAAATTCGCATTCCAGTCTATGATTCGAGATATAATCGTTCTTTTCTTCTGCATTTTCCCCTTTGAAACGTTGTTGGCATTCTGTTCATATCCTCCCGTCTCTTGTAGTGCTTCTACAACGGGTGGGTTCATAAGTTGGACTGTTGGTGTTCGATGTTAAAGTCAGAAGATGTTATAGTTAGTATGCAGATCATAAACATGATTGGATAAATAGAGGCTAGAGTATGTTTTGAATACTTCCTATGCTTCAAGCCTTCAATATGCAGTCATTTACGAGAGCGTTGGTCTTATTTTTATGTTTATTTCTCCCTGTTCTTCATGTCTATTTTGACTCTGTAATTTAAATTTACTCGTTGATGAGTATAATCTCAATCATTCCATGTTGACTTTATAAATCTGGAAACTACTGCTTGATATGACATTTAGAAGTTGAAGAAGTCATGATTATCTATTCAGGTGTAAGGATTTATTTCAAACCCCATGACCACTTTTTTATCCAATATGTCTCTTAAGTTTCTTAACCAATGTATATTCACTGTCAAACCCTTTGGAATGTTGAACGAGTAAACAATTATTGCACCTGTTGAAGTATCTTTCCTGAATTTAGCCACCGACTCTCTAACATATGGGATTTCACTCGTATGATGTGCAGAATTTAATTGGGACGATGTGAAAGTTGACAAACATCGGGAAAACTTCCTTGGCCACAGCATCAAAGCACCTGTTGGAAGATGGCAAAAAGGTAAGGTATTATTGTGAAAGCCTACTATGGTTTGGTGAAGTATGTAAGTTGAGCGATTGTATCAATTAAATGGCTTTCTTAATACAAGGCGCTAGATTTCTCAATGGAAAAATTATTTGCTTTTTTTTTTTTTTTAACTTAGAGCATGTTCTAAAATGTAGTTATGTTCTGTTTTCATTATCTATGTTGCCTCCAAGTTGGCGTTATATTATTCTCCTACTTCTGTGGTTATTTGGGAGGCATATTATTATTCCTGCTTTCATCAATTTGCAAACTATTTTGACCAGTTTTGCATTCCTACTTTTATATACATTGGCTTGAATTACGACATGCTGATTCTTATTTGGTTATGGACAATCCCTCTCACTTCATTGCCCCTGAAATTGTTTGCTGATAAAATGTTTTAACAATACTGTTTTTAATAACAAAACAGGGAAAGATCTACACTGGTATGCACGGGATAAAAAATCGAGTTCGAATGTTGATGTTGCAAAGGAAGAGATAAGATTGATCAAGGAGCAGGAGGAACAGGCGATGAGGGAGGCTCTTGGATTAGCTCCTAAAACTGCTGGCCGATCTCAGGGCAATCGTCTTGATAAGCATGAGTTCTCAGAACTTGTGAAGCGAGGTAGCACTGCAGAAGACTTGGGTGCGGGCCATGCTGAAGCTGCACGGGTTCAGGGTCTTGGTTTTTTGAGGTTAGATCTACCAATATTAAATTGAATTTCCTTTTTATCTGGTTGTGTGGAAATTTCCTTTTTATCTGGTTGTGTGGAAACAAGGTTAGGGATGCATGGAAACTTAGCCCATCATTCAATTATCAGAATTGAATTGTCTATTTGTAGATACGATCCTGGGAATTTAAACAGTCCGAACCTAAATTCATTTTTTCATTAGCATCAATATTACTTGCATTTTGTAATGCCTACCTTCTGGTCTTATTGTCCTGTTAAATTCTGTCTACAAACTGGTTGCAGAGCTCCACATGCCTGGGAAGAATCCAAGTCTCTTCCGCCTGATCAAACGGGCACCTCTGCTGGTTCGGAGAAAACAGATGTTCCTGACCCGCCTGTTAGGAATGCAGAAGAAGAGGAAGTGGAGGATGAAAAGAACAGCAAGAAAAGGAGGCGTGAAGAGAGGCGCGGGGAGAGGCATGAAGAGAGACACGAGAGGCGTGGGGAGAGGCGTGAAGAGAAGCGGGAGAGGCATGAAGAGAGGCGTGAAAGGCGTGAGAGACATGAAAAGTACGAGAAGAAACATTCTCAGGATTCCAGGAAGAAACGGAGTAGTAGAGACAAAGAGAGGGGAAGACACGACTCTGATTGA AAATTACAGATAATTTATAGCTATAATTCTCAACTTCACGTCTGAGAATATAGGACGCGCGAAAGCCAGGGGACAAGAAGACTGTCGCGAAGTTTCGGTCACGACCGTAAGGTCCGATCATGTATCACCCTACTAGAGGCGGCGTTCGTGGCGGTCGAGATCGCTTTCCCGGGATTAGATCAGCGGCTGAGAGTTCGAGAACCGTTGTGGATCTGAATCCGCCATCTAGGGTTTTTGTGCTCTTCCGATATTTGGATACGCAATTTAATTGGGACGATGTGAAAGTTGACAAACATCGGGAAAACTTCCTTGGCCACAGCATCAAAGCACCTGTTGGAAGATGGCAAAAAGGGAAAGATCTACACTGGTATGCACGGGATAAAAAATCGAGTTCGAATGTTGATGTTGCAAAGGAAGAGATAAGATTGATCAAGGAGCAGGAGGAACAGGCGATGAGGGAGGCTCTTGGATTAGCTCCTAAAACTGCTGGCCGATCTCAGGGCAATCGTCTTGATAAGCATGAGTTCTCAGAACTTGTGAAGCGAGGTAGCACTGCAGAAGACTTGGGTGCGGGCCATGCTGAAGCTGCACGGGTTCAGGGTCTTGGTTTTTTGAGAGCTCCACATGCCTGGGAAGAATCCAAGTCTCTTCCGCCTGATCAAACGGGCACCTCTGCTGGTTCGGAGAAAACAGATGTTCCTGACCCGCCTGTTAGGAATGCAGAAGAAGAGGAAGTGGAGGATGAAAAGAACAGCAAGAAAAGGAGGCGTGAAGAGAGGCGCGGGGAGAGGCATGAAGAGAGACACGAGAGGCGTGGGGAGAGGCGTGAAGAGAAGCGGGAGAGGCATGAAGAGAGGCGTGAAAGGCGTGAGAGACATGAAAAGTACGAGAAGAAACATTCTCAGGATTCCAGGAAGAAACGGAGTAGTAGAGACAAAGAGAGGGGAAGACACGACTCTGATTGA ATGTATCACCCTACTAGAGGCGGCGTTCGTGGCGGTCGAGATCGCTTTCCCGGGATTAGATCAGCGGCTGAGAGTTCGAGAACCGTTGTGGATCTGAATCCGCCATCTAGGGTTTTTGTGCTCTTCCGATATTTGGATACGCAATTTAATTGGGACGATGTGAAAGTTGACAAACATCGGGAAAACTTCCTTGGCCACAGCATCAAAGCACCTGTTGGAAGATGGCAAAAAGGGAAAGATCTACACTGGTATGCACGGGATAAAAAATCGAGTTCGAATGTTGATGTTGCAAAGGAAGAGATAAGATTGATCAAGGAGCAGGAGGAACAGGCGATGAGGGAGGCTCTTGGATTAGCTCCTAAAACTGCTGGCCGATCTCAGGGCAATCGTCTTGATAAGCATGAGTTCTCAGAACTTGTGAAGCGAGGTAGCACTGCAGAAGACTTGGGTGCGGGCCATGCTGAAGCTGCACGGGTTCAGGGTCTTGGTTTTTTGAGAGCTCCACATGCCTGGGAAGAATCCAAGTCTCTTCCGCCTGATCAAACGGGCACCTCTGCTGGTTCGGAGAAAACAGATGTTCCTGACCCGCCTGTTAGGAATGCAGAAGAAGAGGAAGTGGAGGATGAAAAGAACAGCAAGAAAAGGAGGCGTGAAGAGAGGCGCGGGGAGAGGCATGAAGAGAGACACGAGAGGCGTGGGGAGAGGCGTGAAGAGAAGCGGGAGAGGCATGAAGAGAGGCGTGAAAGGCGTGAGAGACATGAAAAGTACGAGAAGAAACATTCTCAGGATTCCAGGAAGAAACGGAGTAGTAGAGACAAAGAGAGGGGAAGACACGACTCTGATTGA MYHPTRGGVRGGRDRFPGIRSAAESSRTVVDLNPPSRVFVLFRYLDTQFNWDDVKVDKHRENFLGHSIKAPVGRWQKGKDLHWYARDKKSSSNVDVAKEEIRLIKEQEEQAMREALGLAPKTAGRSQGNRLDKHEFSELVKRGSTAEDLGAGHAEAARVQGLGFLRAPHAWEESKSLPPDQTGTSAGSEKTDVPDPPVRNAEEEEVEDEKNSKKRRREERRGERHEERHERRGERREEKRERHEERRERRERHEKYEKKHSQDSRKKRSSRDKERGRHDSD Homology
BLAST of Carg15856 vs. NCBI nr
Match: KAG7032931.1 (Multiple myeloma tumor-associated protein 2-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 517.3 bits (1331), Expect = 8.2e-143 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg15856 vs. NCBI nr
Match: KAG6602252.1 (Multiple myeloma tumor-associated protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 434.9 bits (1117), Expect = 5.4e-118 Identity = 248/281 (88.26%), Postives = 248/281 (88.26%), Query Frame = 0
BLAST of Carg15856 vs. NCBI nr
Match: XP_022956180.1 (multiple myeloma tumor-associated protein 2 homolog [Cucurbita moschata]) HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-114 Identity = 247/292 (84.59%), Postives = 247/292 (84.59%), Query Frame = 0
BLAST of Carg15856 vs. NCBI nr
Match: XP_022990446.1 (multiple myeloma tumor-associated protein 2 homolog [Cucurbita maxima]) HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111 Identity = 237/281 (84.34%), Postives = 240/281 (85.41%), Query Frame = 0
BLAST of Carg15856 vs. NCBI nr
Match: XP_023523487.1 (multiple myeloma tumor-associated protein 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109 Identity = 246/322 (76.40%), Postives = 246/322 (76.40%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy Swiss-Prot
Match: Q5M9I6 (Multiple myeloma tumor-associated protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Mmtag2 PE=2 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10 Identity = 92/303 (30.36%), Postives = 138/303 (45.54%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy Swiss-Prot
Match: Q99LX5 (Multiple myeloma tumor-associated protein 2 homolog OS=Mus musculus OX=10090 GN=Mmtag2 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.3e-09 Identity = 90/298 (30.20%), Postives = 138/298 (46.31%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy Swiss-Prot
Match: Q9BU76 (Multiple myeloma tumor-associated protein 2 OS=Homo sapiens OX=9606 GN=MMTAG2 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07 Identity = 84/286 (29.37%), Postives = 124/286 (43.36%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy Swiss-Prot
Match: Q58DU0 (Multiple myeloma tumor-associated protein 2 homolog OS=Bos taurus OX=9913 GN=MMTAG2 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05 Identity = 83/294 (28.23%), Postives = 134/294 (45.58%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy TrEMBL
Match: A0A6J1GX39 (multiple myeloma tumor-associated protein 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111457948 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114 Identity = 247/292 (84.59%), Postives = 247/292 (84.59%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy TrEMBL
Match: A0A6J1JMZ3 (multiple myeloma tumor-associated protein 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111487301 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 1.1e-111 Identity = 237/281 (84.34%), Postives = 240/281 (85.41%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy TrEMBL
Match: A0A0A0K9D7 (MMtag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046210 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 2.6e-94 Identity = 212/285 (74.39%), Postives = 229/285 (80.35%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy TrEMBL
Match: A0A1S3C4W8 (multiple myeloma tumor-associated protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103496515 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91 Identity = 206/282 (73.05%), Postives = 220/282 (78.01%), Query Frame = 0
BLAST of Carg15856 vs. ExPASy TrEMBL
Match: A0A6J1BY12 (multiple myeloma tumor-associated protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111006747 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.6e-88 Identity = 207/283 (73.14%), Postives = 221/283 (78.09%), Query Frame = 0
BLAST of Carg15856 vs. TAIR 10
Match: AT3G52220.1 (CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). ) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-56 Identity = 145/282 (51.42%), Postives = 178/282 (63.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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