Carg15801 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGCGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGGTATGAAAACTTTAATTTTTTGAGATCCCATTTTTAGAAGAATCATAATTTATGAAGCTTGTGAAATATTGCATGTTCGTGTTCCATGCTTTCTTTTTGAACAATGTTCATCACATCATTCTTTTTGAACAATGGAAAATTTTAAGTTTTCATAGTGGCACTAATATGCTGCAACCTTCCCCTCTGTCCTAATTCACACATGACCCCATCGTCTCTTAGGAACTACGAGATCACCTCATAGACGTCTTCGATATTCAGAGGTCGTGGAACGACCATAGAACCTTGTTCAATAAATAGAACGCATTAGATTGCAGTTATATTTTAGAAATAGTTCTTCTTCGTGCAGATCATATTCTCATGTTTTAAAAACAACTTAAAACACCCTTCTAGCTTGAAAATATACAAATCATACTGTTTTGTCTATTGACCTTAGATCGAATTCATACTACAGATGAAATTCTTGGCGTAGTATAACCAAAAACCTAACCCTATTGCTCAGAATTTGCTGATTGTATCCCATCTAAGTTTGTATTTCTGATCAGTTTGAATCTTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA ATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGCGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTTTGAATCTTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA ATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGCGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTTTGAATCTTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLNELASTKTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSDNGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWIDTCGSELAEVKEFEPSLNLNPECSEINVSDDENDIGKRRCLCSIM Homology
BLAST of Carg15801 vs. NCBI nr
Match: KAG7032877.1 (hypothetical protein SDJN02_06927, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 435.3 bits (1118), Expect = 3.3e-118 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Carg15801 vs. NCBI nr
Match: XP_022953125.1 (uncharacterized protein LOC111455621 isoform X1 [Cucurbita moschata] >XP_022953133.1 uncharacterized protein LOC111455621 isoform X1 [Cucurbita moschata]) HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110 Identity = 213/223 (95.52%), Postives = 213/223 (95.52%), Query Frame = 0
BLAST of Carg15801 vs. NCBI nr
Match: XP_023535450.1 (uncharacterized protein LOC111796883 [Cucurbita pepo subsp. pepo] >XP_023535457.1 uncharacterized protein LOC111796883 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.4 bits (1038), Expect = 6.2e-109 Identity = 212/223 (95.07%), Postives = 213/223 (95.52%), Query Frame = 0
BLAST of Carg15801 vs. NCBI nr
Match: XP_022953140.1 (uncharacterized protein LOC111455621 isoform X2 [Cucurbita moschata]) HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99 Identity = 200/223 (89.69%), Postives = 200/223 (89.69%), Query Frame = 0
BLAST of Carg15801 vs. NCBI nr
Match: XP_022990463.1 (uncharacterized protein LOC111487315 [Cucurbita maxima] >XP_022990464.1 uncharacterized protein LOC111487315 [Cucurbita maxima]) HSP 1 Score: 364.8 bits (935), Expect = 5.4e-97 Identity = 198/223 (88.79%), Postives = 199/223 (89.24%), Query Frame = 0
BLAST of Carg15801 vs. ExPASy TrEMBL
Match: A0A6J1GMI6 (uncharacterized protein LOC111455621 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455621 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110 Identity = 213/223 (95.52%), Postives = 213/223 (95.52%), Query Frame = 0
BLAST of Carg15801 vs. ExPASy TrEMBL
Match: A0A6J1GNU0 (uncharacterized protein LOC111455621 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455621 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.4e-100 Identity = 200/223 (89.69%), Postives = 200/223 (89.69%), Query Frame = 0
BLAST of Carg15801 vs. ExPASy TrEMBL
Match: A0A6J1JS42 (uncharacterized protein LOC111487315 OS=Cucurbita maxima OX=3661 GN=LOC111487315 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97 Identity = 198/223 (88.79%), Postives = 199/223 (89.24%), Query Frame = 0
BLAST of Carg15801 vs. ExPASy TrEMBL
Match: A0A6J1BV87 (uncharacterized protein LOC111006056 OS=Momordica charantia OX=3673 GN=LOC111006056 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 9.4e-79 Identity = 171/225 (76.00%), Postives = 180/225 (80.00%), Query Frame = 0
BLAST of Carg15801 vs. ExPASy TrEMBL
Match: A0A0A0K9H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055390 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78 Identity = 165/225 (73.33%), Postives = 181/225 (80.44%), Query Frame = 0
BLAST of Carg15801 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26 Identity = 94/238 (39.50%), Postives = 133/238 (55.88%), Query Frame = 0
BLAST of Carg15801 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26 Identity = 94/238 (39.50%), Postives = 133/238 (55.88%), Query Frame = 0
BLAST of Carg15801 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23 Identity = 85/230 (36.96%), Postives = 114/230 (49.57%), Query Frame = 0
BLAST of Carg15801 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05 Identity = 34/101 (33.66%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of Carg15801 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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