Carg15778 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15778
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein DOF1.2-like
Location	Carg_Chr04: 18846563 .. 18847213 (-)
RNA-Seq Expression	Carg15778
Synteny	Carg15778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGACGCCGCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAACCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCACAGCCTCGTTACTTCTGTAAATCCTGCCGCCGTTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCCAACGTAATTTCAACCCAAATTACCGAACCCTCTTCCCAATCCAATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCACCAAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCGAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAACATCGGATTACAAACGACTATGAAAATTTCCCATTTGAATTACAACCCGAACTAACCATTGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTCGTGA

mRNA sequence

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGACGCCGCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAACCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCACAGCCTCGTTACTTCTGTAAATCCTGCCGCCGTTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCCAACGTAATTTCAACCCAAATTACCGAACCCTCTTCCCAATCCAATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCACCAAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCGAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAACATCGGATTACAAACGACTATGAAAATTTCCCATTTGAATTACAACCCGAACTAACCATTGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTCGTGA

Coding sequence (CDS)

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGACGCCGCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAACCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCACAGCCTCGTTACTTCTGTAAATCCTGCCGCCGTTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCCAACGTAATTTCAACCCAAATTACCGAACCCTCTTCCCAATCCAATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCACCAAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCGAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAACATCGGATTACAAACGACTATGAAAATTTCCCATTTGAATTACAACCCGAACTAACCATTGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTCGTGA

Protein sequence

MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAVFAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS

Homology

[Close]

BLAST of Carg15778 vs. NCBI nr
Match: KAG7032855.1 (Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448.7 bits (1153), Expect = 2.8e-122
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120

Query: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180
           FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP
Sbjct: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS 217
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS 216

[Close]

BLAST of Carg15778 vs. NCBI nr
Match: KAG6602163.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.8 bits (1148), Expect = 1.0e-121
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQS+IDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSDIDLAAV 120

Query: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180
           FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP
Sbjct: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS 217
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFS 216

[Close]

BLAST of Carg15778 vs. NCBI nr
Match: XP_022923477.1 (dof zinc finger protein DOF1.2-like [Cucurbita moschata])

HSP 1 Score: 437.6 bits (1124), Expect = 6.4e-119
Identity = 210/215 (97.67%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPPTPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSS+S+IDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAV 120

Query: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180
           FAKFLNTPPSTK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPEHRITNDYENFP
Sbjct: 121 FAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 216
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 215

[Close]

BLAST of Carg15778 vs. NCBI nr
Match: XP_023513410.1 (dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 205/215 (95.35%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHL    PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHL----PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITE SS+S+IDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAV 120

Query: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180
           FAKFLNTP STKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPE RIT DYENFP
Sbjct: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 216
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 211

[Close]

BLAST of Carg15778 vs. NCBI nr
Match: XP_022989804.1 (dof zinc finger protein DOF1.2-like [Cucurbita maxima])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPP TPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQ-SNIDLAA 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVIST+ITEPSS  S+IDLAA
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTKITEPSSNGSDIDLAA 120

Query: 121 VFAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENF 180
           VFAKFLNTPPSTKP VSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPE RIT +YENF
Sbjct: 121 VFAKFLNTPPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKNYENF 180

Query: 181 PFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 216
           PF LQPELTIDELWPSQPIEQLQEW+SF CNYNAEF
Sbjct: 181 PFGLQPELTIDELWPSQPIEQLQEWKSFLCNYNAEF 216

[Close]

BLAST of Carg15778 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 26  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 85
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 86  GCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAVFAKFLNTPP 130
           GCRK+RR KSS+ +    ++ +          +IDLA V+A FLN  P
Sbjct: 73  GCRKSRRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]

BLAST of Carg15778 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 22  LERKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 81
           +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 82  PVGGGCRKTRRSKSSTSSTILPN------VISTQITEPSSQ--SNIDLAAVFAKFL-NTP 141
           PVGGGCRK  RS+ ++      N      +I+      SS   S+IDLAAVFA+++ +  
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 142 PSTKPHVSTSSPES--TDPSDNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPF 201
           PS+  + + S  +S  T  +  L + + +I  E   DL     FN    +   D E F  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEVFGQ 201

Query: 202 ELQPELTIDELWPSQP-IEQLQEWESFSCNYNAE 215
            LQ +   +E++  Q  ++  +  E   C+++ E
Sbjct: 202 FLQEDR--EEIFEFQGLLDDKEIQEILECSFSEE 233

[Close]

BLAST of Carg15778 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.0e-28
Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 15  PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 74
           PP  A  +ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 75  RNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAVFAKFLNTPPSTKPH 134
           RN+PVGGG RK +RS S++SS           + PSS S+     +FA   NTP    PH
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSS-----------SSPSSSSS-SKKPLFAN-NNTPTPPLPH 144

Query: 135 VSTSSPES 143
           ++    E+
Sbjct: 150 LNPKIGEA 144

[Close]

BLAST of Carg15778 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 11  PPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTK 70
           PP      A   ER+ +P  EKA NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+
Sbjct: 55  PPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTE 114

Query: 71  GGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAA 120
           GGSLRNVPVGGG RK +RS SS +S    +  +      S+  ++ +A+
Sbjct: 115 GGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMAS 163

[Close]

BLAST of Carg15778 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 10  LPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 69
           L P  PP      ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 70  KGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQ 106
           +GGSLRN+PVGGG RK +RS SS+S     +  STQ
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQ 124

[Close]

BLAST of Carg15778 vs. ExPASy TrEMBL
Match: A0A6J1E679 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111431155 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.1e-119
Identity = 210/215 (97.67%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPPTPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSS+S+IDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAV 120

Query: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180
           FAKFLNTPPSTK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPEHRITNDYENFP
Sbjct: 121 FAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 216
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 215

[Close]

BLAST of Carg15778 vs. ExPASy TrEMBL
Match: A0A6J1JQE1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPP TPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQ-SNIDLAA 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVIST+ITEPSS  S+IDLAA
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTKITEPSSNGSDIDLAA 120

Query: 121 VFAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENF 180
           VFAKFLNTPPSTKP VSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPE RIT +YENF
Sbjct: 121 VFAKFLNTPPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKNYENF 180

Query: 181 PFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 216
           PF LQPELTIDELWPSQPIEQLQEW+SF CNYNAEF
Sbjct: 181 PFGLQPELTIDELWPSQPIEQLQEWKSFLCNYNAEF 216

[Close]

BLAST of Carg15778 vs. ExPASy TrEMBL
Match: A0A6J1FHI1 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111445412 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 155/226 (68.58%), Postives = 174/226 (76.99%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQ   LPPP PPPFA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 6   MSDHHQ---LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYF 65

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNV---ISTQITEPSSQS-NID 120
           CKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +     STQITE SS   +ID
Sbjct: 66  CKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDID 125

Query: 121 LAAVFAKFLNT-PPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPEHR 180
           LAAVFA++LNT PPST+ H  TSSPES DP +N      EIFFE LSDL     NQP+ +
Sbjct: 126 LAAVFARYLNTAPPSTEAHALTSSPESVDPLENC-----EIFFEGLSDLLTEEENQPQEQ 185

Query: 181 ---ITNDYENFPFELQPELTI-DELWPSQPIEQLQEWESFSCNYNA 214
              I  +YEN PF L  EL + +E+W SQ   Q+QE +SFSCNYNA
Sbjct: 186 KQGIMGNYENTPFGLHAELGVEEEVWASQ---QIQELDSFSCNYNA 220

[Close]

BLAST of Carg15778 vs. ExPASy TrEMBL
Match: A0A6J1JZV1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.0e-70
Identity = 153/226 (67.70%), Postives = 173/226 (76.55%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQ+    PP PPPFA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 6   MSDHHQLPQ--PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYF 65

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNV---ISTQITEPSSQS-NID 120
           CKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +     STQITE SS   +ID
Sbjct: 66  CKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDID 125

Query: 121 LAAVFAKFLN-TPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPEHR 180
           LAAVFA++LN TPPST+ H  TSSPES DP +N      EIFFE L+DL     NQP+ +
Sbjct: 126 LAAVFARYLNTTPPSTEHHTLTSSPESVDPLENC-----EIFFEGLTDLLIEEENQPQEQ 185

Query: 181 ---ITNDYENFPFELQPELTI-DELWPSQPIEQLQEWESFSCNYNA 214
              I  +YEN PF L  EL + +ELW SQ   Q+QE +SFSCNYNA
Sbjct: 186 KQGIMGNYENTPFGLHAELGVEEELWASQ---QIQELDSFSCNYNA 221

[Close]

BLAST of Carg15778 vs. ExPASy TrEMBL
Match: A0A5A7USP7 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00270 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 9.1e-63
Identity = 141/226 (62.39%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQ+    PP PPPF +HLERKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQL----PPPPPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI----LPNVISTQITEPSSQSNID 120
           CKSCRRYWTKGGSLRNVPVGGGCRK+RR+KSS SS I     P++ S      SS S+ID
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDID 120

Query: 121 LAAVFAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHR----- 180
           LAAVFA+FLN    ++P   TSSPES DP      +  EIF E LSDL  + E++     
Sbjct: 121 LAAVFARFLN----SEPQALTSSPESVDP-----LEISEIFLEGLSDLLLEDENQREEGK 180

Query: 181 --ITNDYENFPFELQPELTID-ELWPSQPI-EQLQEWESFSCNYNA 214
             I  ++EN  F L+ EL ID E+W SQ + EQ+QE +SFSCNY A
Sbjct: 181 QGIPGNHENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYA 213

[Close]

BLAST of Carg15778 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.7e-33
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 26  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 85
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 86  GCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAVFAKFLNTPP 130
           GCRK+RR KSS+ +    ++ +          +IDLA V+A FLN  P
Sbjct: 73  GCRKSRRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]

BLAST of Carg15778 vs. TAIR 10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 22  LERKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 81
           +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 82  PVGGGCRKTRRSKSSTSSTILPN------VISTQITEPSSQ--SNIDLAAVFAKFL-NTP 141
           PVGGGCRK  RS+ ++      N      +I+      SS   S+IDLAAVFA+++ +  
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 142 PSTKPHVSTSSPES--TDPSDNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPF 201
           PS+  + + S  +S  T  +  L + + +I  E   DL     FN    +   D E F  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEVFGQ 201

Query: 202 ELQPELTIDELWPSQP-IEQLQEWESFSCNYNAE 215
            LQ +   +E++  Q  ++  +  E   C+++ E
Sbjct: 202 FLQEDR--EEIFEFQGLLDDKEIQEILECSFSEE 233

[Close]

BLAST of Carg15778 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-29
Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 15  PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 74
           PP  A  +ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 75  RNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAVFAKFLNTPPSTKPH 134
           RN+PVGGG RK +RS S++SS           + PSS S+     +FA   NTP    PH
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSS-----------SSPSSSSS-SKKPLFAN-NNTPTPPLPH 144

Query: 135 VSTSSPES 143
           ++    E+
Sbjct: 150 LNPKIGEA 144

[Close]

BLAST of Carg15778 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 10  LPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 69
           L P  PP      ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 70  KGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQ 106
           +GGSLRN+PVGGG RK +RS SS+S     +  STQ
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQ 124

[Close]

BLAST of Carg15778 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 32  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKS 91
           +A NCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+ +RS S
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 92  STSS 96
           S  S
Sbjct: 106 SAFS 109

The following BLAST results are available for this feature:

BLAST of Carg15778 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032855.1	2.8e-122	100.00	Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6602163.1	1.0e-121	99.54	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923477.1	6.4e-119	97.67	dof zinc finger protein DOF1.2-like [Cucurbita moschata]	[more]
XP_023513410.1	1.2e-112	95.35	dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989804.1	1.2e-112	94.44	dof zinc finger protein DOF1.2-like [Cucurbita maxima]	[more]

BLAST of Carg15778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC5	1.4e-31	60.19	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
P68349	5.4e-28	42.06	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]
Q84JQ8	7.0e-28	53.91	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q9SXG8	2.7e-27	55.96	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q8LAP8	2.7e-27	63.54	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]

BLAST of Carg15778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E679	3.1e-119	97.67	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11143115...	[more]
A0A6J1JQE1	5.6e-113	94.44	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 ...	[more]
A0A6J1FHI1	1.8e-71	68.58	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11144541...	[more]
A0A6J1JZV1	2.0e-70	67.70	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 ...	[more]
A0A5A7USP7	9.1e-63	62.39	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Carg15778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52440.1	9.7e-33	60.19	Dof-type zinc finger DNA-binding family protein	[more]
AT1G21340.1	3.8e-29	42.06	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	5.0e-29	53.91	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	1.9e-28	63.54	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28510.1	1.6e-27	82.81	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 32..88 e-value: 4.8E-32 score: 109.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 36..72
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 34..88 score: 28.574398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..150
None	No IPR available	PANTHER	PTHR31992:SF198	DOF ZINC FINGER PROTEIN DOF1.2	coord: 13..155
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 13..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15778-RA	Carg15778-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding