Carg15776 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGGAAGAGAGCAGCGGAAATGGAGTCAGAAATGAGGTCTGCAACGGCGCAGCTTTCGGTGGATCATGCCGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCTATGTGATACTTCGATTTCTGGGTATTTCTCTGTTCCTCTCTGAGAATTGTAGAAAGGGAATGGAATGGTTGTGTTAAATGGGGGATTTTGTTGTTGTTGTTGCTGCTGCAGATAAGGTAGGGCCGACAATGGCGGTTCTCCGACAGGACATTCATCAGAACATTCAGGTAGAAACAGAGCATTAAAATGGGGAACATGTGTGTGTGTGTGTGTGTTTATGCCTCTACTGATGATACTAAGTGGTGGTGGGTTGAAATGCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGGTAGCTACTTGTGTTGCTTCCTTGACTTCTGCTAACTGCTTGTGATGCAAATTGTTAGTTCCTAAGCTTTTGTTGTGTTCTGTGTGGTTGAGAAAAAATCTATTTCAGTAACGGCCTAAGTCTACCTCGAGCAGATATGGTCCTTTTTCGACTTTTCCTTGCTTTCACATCAGAATGTTTCGTTCTCCTCCTTAGCTGATGCAGGGTCTCACAATATCCACCCTCTTCGAGGACCAACATCCTCACCAACTGATGTGGGATCTCATAATATCTACCTCCTTCGGGGACCAACGTCTTCGCTGACACTTGTTCTTTTTTCCAATCGTGTTTCGTTCTCCTCTCCAACCGATGTGGAGTCTCACAATATCCATCCTCTAGCGTCCTCCCTAACTGATGTGAGGTCTCACAAAATCTACCTCCTTCAGGGACCAACGTCCTCGCTAACACTCGTTCCTTTCTCCAATCGATGTGGGGTTCTCTTTGGGCTTTTCCTTTCGGACTTCCCCTTAAGGTTTTAAAAACGTGTCTACTAGAGAGCGGTTTTCACACTTTTATAAAGAATGCTTTGTTCTCCTCCCCAACCGATATGAGATCTCACAATATCCACTCCCTTCGGGCCCAACGTCTTCGCTGAGACTTGTTCCCTTCTCCAATCGAAGTGAGTTCTCTTTGGACTTTTCCTTTCGGATTTTTCCTCAAAGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCTACACTCTTATAAAGAATGCTTCGTTCTTCTCCCTAACTGATGTGAGATTTCACCGTTTCCTTTGCCTGTGTTTCTCTTTCCCCTATTCTCTTCTATGTGTAGTTGTGGATTAGGAGTTTTATGGAGCTTTACTTTGATATAGGTCCCTGGATTTTACAGTGGCGTTATTAGAGAAGTCAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCCGCTGTCAAAGTATTGTCTCTTTTGCTTTTGTTTGCCATCATGGTACTTCTGTATAAACCAAAAACCTATGGTTCTTGTAGATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTCGATCGTCTCCTAACAGCCAACGAGGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTAAGCCCAAGTATTACTTTCAGCACTATAATCAATTTCATGACAGTTAACCAACCGAGAGTGTTCTTATGTGTCTTTTCCCAGAGACTGTACAGGTTAGATCGATTAAAGTCTGCCTAGAGAAGAAGTAATGGACAAAGGAATGAAGAATGGATCCTGAAGTTCTGACATTTTCTTGTAAATACACTGCCATACGTGTCACAGAAAAGTTTCCCTCTTTTTCAGATCTCACGTCAGTTTGGCGAAGCCAAAAGGGTGTGAAAATCTCTCCCTAGCAGACACGTTTTAAAATCGTGAGGCTGACGGCAATACGTAACTAACCAAAGCAGACAATATCAGCTAGCCCACCTTAGACTGTTACATATTGTATTCATACACTTCTAATCTAAGTTTTCTTACAGATGTAATGGTTAGGCTTGTAATGTAAGTAATAGAGTTTCTAGGCCTTACGTCGAATCTCTAATCTTCGACCGTGCTGTTTAGTCAATGGCAACAAAACAATTACCTCATAAAGATATGCTTCCGTTCTGCTACCAAATTCTGCTTATTGTTCCAATCCCTTAATATATAGCTGACAGATGCTCAATCTGTTCCTAGTCCATCCAGAATAAACTAATATGTGAGGAAAAGTAGATATCAGTTCTAAGTTTTCAGTCAAAATGTATCATTCTTTCAACCTGAAGCTTCCTCATCTTCAATGGCTGCAGTTAACTTGATGGCCACTTTCACGATTCTGATGTTCTCCTGCAATTGTTTCATCATAAGTCCTGACACAATAATAATGTTAAAGAGTTAAAATATAAGGGATGAACTCAGTTTTCTTCCGGTTAATGCAAAATTTACCATTGTAAGATCATTGACACGCATCTCAATTTACCATTGTCAGCCAACAATTACCACGAACATCACTGACATTCAGCTTCACATTTCTAGTCGGTACCTCATTTCAATTATGTTTATACAATCCAAAAATGCCAGAAAAATAAAACAGAATAAACCTGAGATCGAAACAACAGCAAAAATTATGGTAAGTTCACTGTTCTTGATTAGTCTATAAACAATATAGTTAACGAAGAGTTGCATGGAGGGGAAATCAGCGGTATTTACATCCCCCCCTACAATTGTTCAGTGGAAAGAGAAGAGTTTACTTAGATTTATAGCTCAAAGTCACCAGGTTTTCCCTACAGATGATAGAATCCAAAACCATCGTTTATTCCTTTCGTGTTTTCTCCTGTATCTGTGGCTAATTGGATGGGTTTAAGGTAACGGGTTAGCTCTACAAGGGACCAAGACTGGTACTTTTTGCCAGTTAATGTCCCCGCCATTGACATGTCTATTCTAAGCTAAGAATATCAGCATGGTTAAAAATCATGCCAACATATGAGTTTCGTCATTTACATTATACAAAGACACCATGTTATCTGCCGATTCTATTTCGAGAAGCGGAGGATTTTGATTGGGAATGTTGTCTCTTACAATTGGATATTCCACTGTCGCTTACACTGCCTTGAGTAAGATTTTCTTCAGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCACTCTTCCGCTGCTCTTCATGCCGTTTAA ATGAAGAGGAAGAGAGCAGCGGAAATGGAGTCAGAAATGAGGTCTGCAACGGCGCAGCTTTCGGTGGATCATGCCGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCTATGTGATACTTCGATTTCTGGATAAGGTAGGGCCGACAATGGCGGTTCTCCGACAGGACATTCATCAGAACATTCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCCGCTGTCAAAATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTCGATCGTCTCCTAACAGCCAACGAGGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCACTCTTCCGCTGCTCTTCATGCCGTTTAA ATGAAGAGGAAGAGAGCAGCGGAAATGGAGTCAGAAATGAGGTCTGCAACGGCGCAGCTTTCGGTGGATCATGCCGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCTATGTGATACTTCGATTTCTGGATAAGGTAGGGCCGACAATGGCGGTTCTCCGACAGGACATTCATCAGAACATTCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCCGCTGTCAAAATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTCGATCGTCTCCTAACAGCCAACGAGGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCACTCTTCCGCTGCTCTTCATGCCGTTTAA MKRKRAAEMESEMRSATAQLSVDHAAPDIPTKPFLSLCYVILRFLDKVGPTMAVLRQDIHQNIQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTREEPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANEERNDTLVEEIDSFISQLSPFLEHIHSILVQKILLTRNSKESDDYHPWHSSAALHAV Homology
BLAST of Carg15776 vs. NCBI nr
Match: KAG7032853.1 (Glycolipid transfer protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-116 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Carg15776 vs. NCBI nr
Match: XP_022923457.1 (glycolipid transfer protein 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96 Identity = 188/202 (93.07%), Postives = 189/202 (93.56%), Query Frame = 0
BLAST of Carg15776 vs. NCBI nr
Match: KAG6602162.1 (Glycolipid transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96 Identity = 188/201 (93.53%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of Carg15776 vs. NCBI nr
Match: XP_022923464.1 (glycolipid transfer protein 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 361.3 bits (926), Expect = 5.8e-96 Identity = 187/201 (93.03%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of Carg15776 vs. NCBI nr
Match: XP_023546404.1 (glycolipid transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355.1 bits (910), Expect = 4.2e-94 Identity = 184/202 (91.09%), Postives = 187/202 (92.57%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.0e-48 Identity = 109/223 (48.88%), Postives = 142/223 (63.68%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.1e-44 Identity = 102/215 (47.44%), Postives = 135/215 (62.79%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.6e-24 Identity = 62/171 (36.26%), Postives = 91/171 (53.22%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy Swiss-Prot
Match: D3ZY60 (Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.5e-14 Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy Swiss-Prot
Match: Q96JA3 (Pleckstrin homology domain-containing family A member 8 OS=Homo sapiens OX=9606 GN=PLEKHA8 PE=1 SV=3) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13 Identity = 42/145 (28.97%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy TrEMBL
Match: A0A6J1E660 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 9.6e-97 Identity = 188/202 (93.07%), Postives = 189/202 (93.56%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy TrEMBL
Match: A0A6J1E6H1 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 2.8e-96 Identity = 187/201 (93.03%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy TrEMBL
Match: A0A6J1JGT9 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93 Identity = 182/207 (87.92%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy TrEMBL
Match: A0A6J1JRD9 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 6.5e-93 Identity = 181/201 (90.05%), Postives = 186/201 (92.54%), Query Frame = 0
BLAST of Carg15776 vs. ExPASy TrEMBL
Match: A0A6J1JZV8 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489777 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.5e-76 Identity = 154/212 (72.64%), Postives = 172/212 (81.13%), Query Frame = 0
BLAST of Carg15776 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 191.8 bits (486), Expect = 5.7e-49 Identity = 109/223 (48.88%), Postives = 142/223 (63.68%), Query Frame = 0
BLAST of Carg15776 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 ) HSP 1 Score: 178.3 bits (451), Expect = 6.5e-45 Identity = 102/215 (47.44%), Postives = 135/215 (62.79%), Query Frame = 0
BLAST of Carg15776 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 141.4 bits (355), Expect = 8.8e-34 Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of Carg15776 vs. TAIR 10
Match: AT3G21260.1 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 136.0 bits (341), Expect = 3.7e-32 Identity = 67/133 (50.38%), Postives = 91/133 (68.42%), Query Frame = 0
BLAST of Carg15776 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 ) HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25 Identity = 62/171 (36.26%), Postives = 91/171 (53.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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