Carg15703 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCTTGAAGAAATCTGGAAGAAATCCTGCGTTTTAGCTGTTGATCCCTTTGGCTTTTCGTTACCGGACCCACGTTGTCAGAAGCAGAGCACAGACACCACCCCAGCCAAATTCAAAAACTCCACCGCACGCAATCTAATCGAAGAACCTTCGTGGTAACGCCCTTCTGCATCGGCGCCTCTCTCTGTTGTTTGAGCAGCGCTTTCCCCACCAAGAACTCTTCCTTGAACCCATTTTCTTTTTCTCTATAGTGTTTGGATCGATTCCCTTCTTGTTTAGTCCGATTCTGATTATATTCTAATTTGGGGCCGTTCTGTTTCATTGCCCGTGGTGTCTGTTTTGGCGATTCAGAAGGTTTTCTCATCTGGGTCATCGCTCAATCACGGTTTTAGGCTATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCATAAATACGAAGAAGGTGAAGTCTGTGGGATTTGTGGCCATCGGGTTCCCGCTACATCGGAGAAAACTTCGTTGCAATTTGCCGCGTTTCCTTCAGAGATTTTGCCGGAGTTTCTTTATCTGGGAAGCTATGATAACGCTTCCCGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTGAATGTATGTTTAATTTCTTCATTATCTGTGTCGTTTGATTTTAGTGTTTTAGATTGTTCTATTTCATGAAGAAAAATCTGCGTGGTTTGAGTGTTGGAGCGACAATCATCTATTAGTTTGCTTGTTACTGTTCTTGTCTGATTGGATCTTTTGTTGGGCTGTGGCTTTCTGGTTCATCTCTTCTTCTCTGTTTCAGCTTCATGGTATAGATTATCTTGTATGGCATCGATTCTGGTCGGATGGAACGGTTCCTGTAAAAAATTCTTTGATAGTTTGCATTGGATAGAGTTCAACAGTGCAATGACCAAGGTTTTATATATATGTTAATATTGTTTGCAGACTGTGCCTGATTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTTGATGATGCAGTTGAATTCCTAGGTGGGTTTTCTTTATCTTCTCCAAAATGAACTGTATCTGCTGATTCATTTGTTGGGTTAGTCCATGTGTTGCAGTGTTTTTCATTTCAAATGTGACTTTTTTGGTATAAGAAGATAGATGTAGAAAAGAGTCATCCTATAGCTTTGTGAGATCCCACATCGGTCGGTGGGTCGGTGGGAGAGGGGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTCTTAGCAGATGTGTTCTAAAATCTTGAGGGGAAGCCCGGAAGAAGAAAGAGGACAATATTAGCTAGCGGTGGGTTTGGGCTGTTATAAATGGTATCAGAGCAAGACACTGAGCGAATGTCTAGCAAGGAGGCTAAGTCCTGAAGGGGGTGGATTGGAGGGTCCCATGTCGATTGGAGATGGGAACGAGTGCCAACGAAGACGCTGGGTCCCGAAGGGGGGTGAATTATGAGATCTCACATCAGTTGGAGAGGAGAAAGAGTGTCAACGAAGACGTTGAGTCCCGAAGGGGGGTAGATTGTGAGATCCCATGTCGGTTGGAGAGGGGAATGAAGCATCATTCTTTATAAGGGTGTGGAAACTTGTCCCTAGTAGATGCGTTTTAAAACCTTGAGGAGAAGTCTGGAAAGGAAAACCCAAATAGAACAGTATCTGCTAGCGGTGGGCTTAGGTTTGAGCTGTTACAGCTGTCTTATAGGTTTTTGCTTAATGCAATATTAGATTACCCGTTGACCGAATAAAAATGGCTTTCAGTTAAAAACATGTCGTTAGGCTTCTATAATTCACTGATTCGAGAAGTCTAACGTGCCCGATGTTGCTTGTGACGTGCAGAGCAATGTGAAAGGGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTTTGAACTTATTCTTAGATAAACTGGAACTCTGCAGTTGTATAATGTACCCAGACGACATAAGTTTAGGATATGCATAACTGTCCTCACTAATAGATTACACTGATTGATCATAGGTCTCCAGCTATTGTAATAGCGTTCTTGATGAAATGCAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGGTTAAAGAGCGGAGGCCATCCGTCGACTTAACTGAACGTATGTCTACGACACATTATCCGTTCCTTGGTCTGCTTTTCAAATAAGAAAATACCACTTTGTTATTCAATTCTCTTGATCTCTGAGTATTTCTATGAGATCCCACGTCGGTTGGAGAGAAGAACGAAACATTCTTATAAGGGTGTGGAAACCTCTCCCTAACAAACCCATTTTAAAACCGTGAGGCTGACGACGATACGTAACGGTCAAAAAAAGACAATATCTGCTTGCGGTGGGCTTGAGCCGTTACCCCTACTCTACTACTAACTATGAAGTGTACATTTTTCGTATATATATATATATATATACACTTCACCAAATGGATTGAAATTGTATAACTATTTCTTTAGGTTTGTTTATCACAGAGGCCTGCACTGCATCTGCTTGTGTTATTTTGTGGGATCCCACGTTTGTTAGAAAGATGAACGAAGCATTCCTATGTGAAAACCTCTCCCTAATAGATGCGTTTTAAAACCTTCAGGGAAAGCCCAAAAAGGACAATATCTGCTAGAGGTAGGCTTGAGCCGTTACAAATGGTATCAGAGTCAGACACCGAACGGTGTGCCAGCGACGACGCTGGGACCCCAAGGGGGGTGGATTATGAGATCCCACATTGGATGGAGAGATGAACGAAGCATTCCTTACAAGGGTGTGAAAACCTCTCCCTAGCATACGCGTTTTAAAAACTTTGAGGGCAAGCCGGGAAGGAAAGCCCAAAAATGACAATATCTGCTAGTGGTGGGTTCGGGCTTTGTAATTGAGCTTTGACGTTAGCTTTGCATTCTAATGTCGTCTGTTCTATTTGGAAATGTTTTTATCAGCAAAGAATATAGTCTGAGTAACATTTTTGGTGTGTTAAAATAGCTATCTATCAGCAGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCATCCCAAAACACCCTTCCAGTCTTCCCTCCTGTTGGTCTGCCTTCTTTTGGCTTCAACTTCCCAAAGACCAGCGACCCAGTTCCTACAACACCATTCAACACCATTGCTGCAACTTCGATCTTTACCCGCCCAACCGTAGATGTACCGTCCCACGAGTTTACATTCGGTGCTGGGCAGACTCAAAACAGTTTCGCCGCTAATCCACAGATCAACCAGCAGCCACATCCAAATGGGTAA AATCTTGAAGAAATCTGGAAGAAATCCTGCGTTTTAGCTGTTGATCCCTTTGGCTTTTCGTTACCGGACCCACGTTGTCAGAAGCAGAGCACAGACACCACCCCAGCCAAATTCAAAAACTCCACCGCACGCAATCTAATCGAAGAACCTTCGTGGTAACGCCCTTCTGCATCGGCGCCTCTCTCTGTTGTTTGAGCAGCGCTTTCCCCACCAAGAACTCTTCCTTGAACCCATTTTCTTTTTCTCTATAGTGTTTGGATCGATTCCCTTCTTGTTTAGTCCGATTCTGATTATATTCTAATTTGGGGCCGTTCTGTTTCATTGCCCGTGGTGTCTGTTTTGGCGATTCAGAAGGTTTTCTCATCTGGGTCATCGCTCAATCACGGTTTTAGGCTATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCATAAATACGAAGAAGGTGAAGTCTGTGGGATTTGTGGCCATCGGGTTCCCGCTACATCGGAGAAAACTTCGTTGCAATTTGCCGCGTTTCCTTCAGAGATTTTGCCGGAGTTTCTTTATCTGGGAAGCTATGATAACGCTTCCCGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTGAATACTGTGCCTGATTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTTGATGATGCAGTTGAATTCCTAGAGCAATGTGAAAGGGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTCTCCAGCTATTGTAATAGCGTTCTTGATGAAATGCAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCATCCCAAAACACCCTTCCAGTCTTCCCTCCTGTTGGTCTGCCTTCTTTTGGCTTCAACTTCCCAAAGACCAGCGACCCAGTTCCTACAACACCATTCAACACCATTGCTGCAACTTCGATCTTTACCCGCCCAACCGTAGATGTACCGTCCCACGAGTTTACATTCGGTGCTGGGCAGACTCAAAACAGTTTCGCCGCTAATCCACAGATCAACCAGCAGCCACATCCAAATGGGTAA ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCATAAATACGAAGAAGGTGAAGTCTGTGGGATTTGTGGCCATCGGGTTCCCGCTACATCGGAGAAAACTTCGTTGCAATTTGCCGCGTTTCCTTCAGAGATTTTGCCGGAGTTTCTTTATCTGGGAAGCTATGATAACGCTTCCCGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTGAATACTGTGCCTGATTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTTGATGATGCAGTTGAATTCCTAGAGCAATGTGAAAGGGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTCTCCAGCTATTGTAATAGCGTTCTTGATGAAATGCAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCATCCCAAAACACCCTTCCAGTCTTCCCTCCTGTTGGTCTGCCTTCTTTTGGCTTCAACTTCCCAAAGACCAGCGACCCAGTTCCTACAACACCATTCAACACCATTGCTGCAACTTCGATCTTTACCCGCCCAACCGTAGATGTACCGTCCCACGAGTTTACATTCGGTGCTGGGCAGACTCAAAACAGTTTCGCCGCTAATCCACAGATCAACCAGCAGCCACATCCAAATGGGTAA MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQFAAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPDCQNLYKNSFTYHCLQYDKTLPFDDAVEFLEQCERDKARVLVHCMSGKNRSPAIVIAFLMKCKGWRLAQSYQWLQEYEQKVFGSSQNTLPVFPPVGLPSFGFNFPKTSDPVPTTPFNTIAATSIFTRPTVDVPSHEFTFGAGQTQNSFAANPQINQQPHPNG Homology
BLAST of Carg15703 vs. NCBI nr
Match: KAG7012024.1 (Protein-tyrosine-phosphatase IBR5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 513.5 bits (1321), Expect = 1.0e-141 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Carg15703 vs. NCBI nr
Match: XP_022952855.1 (protein-tyrosine-phosphatase IBR5-like [Cucurbita moschata] >XP_022952856.1 protein-tyrosine-phosphatase IBR5-like [Cucurbita moschata]) HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-138 Identity = 244/261 (93.49%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of Carg15703 vs. NCBI nr
Match: KAG6572425.1 (Protein-tyrosine-phosphatase IBR5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 501.1 bits (1289), Expect = 5.3e-138 Identity = 243/261 (93.10%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of Carg15703 vs. NCBI nr
Match: XP_023511478.1 (protein-tyrosine-phosphatase IBR5-like [Cucurbita pepo subsp. pepo] >XP_023511479.1 protein-tyrosine-phosphatase IBR5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 494.2 bits (1271), Expect = 6.5e-136 Identity = 243/264 (92.05%), Postives = 243/264 (92.05%), Query Frame = 0
BLAST of Carg15703 vs. NCBI nr
Match: XP_022968915.1 (protein-tyrosine-phosphatase IBR5-like [Cucurbita maxima]) HSP 1 Score: 482.6 bits (1241), Expect = 1.9e-132 Identity = 237/264 (89.77%), Postives = 240/264 (90.91%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy Swiss-Prot
Match: Q84JU4 (Protein-tyrosine-phosphatase IBR5 OS=Arabidopsis thaliana OX=3702 GN=IBR5 PE=1 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-81 Identity = 150/243 (61.73%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy Swiss-Prot
Match: Q91790 (Dual specificity protein phosphatase 1-A OS=Xenopus laevis OX=8355 GN=dusp1-a PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15 Identity = 60/223 (26.91%), Postives = 106/223 (47.53%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy Swiss-Prot
Match: Q8BFV3 (Dual specificity protein phosphatase 4 OS=Mus musculus OX=10090 GN=Dusp4 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.5e-15 Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy Swiss-Prot
Match: Q62767 (Dual specificity protein phosphatase 4 OS=Rattus norvegicus OX=10116 GN=Dusp4 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.5e-15 Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy Swiss-Prot
Match: Q13115 (Dual specificity protein phosphatase 4 OS=Homo sapiens OX=9606 GN=DUSP4 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15 Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy TrEMBL
Match: A0A6J1GLD2 (protein-tyrosine-phosphatase IBR5-like OS=Cucurbita moschata OX=3662 GN=LOC111455422 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 8.8e-139 Identity = 244/261 (93.49%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy TrEMBL
Match: A0A6J1HYI4 (protein-tyrosine-phosphatase IBR5-like OS=Cucurbita maxima OX=3661 GN=LOC111468088 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 9.4e-133 Identity = 237/264 (89.77%), Postives = 240/264 (90.91%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy TrEMBL
Match: A0A6J1D2M4 (protein-tyrosine-phosphatase IBR5 OS=Momordica charantia OX=3673 GN=LOC111016771 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 7.5e-122 Identity = 217/254 (85.43%), Postives = 226/254 (88.98%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy TrEMBL
Match: A0A6J1JNG0 (protein-tyrosine-phosphatase IBR5 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486281 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121 Identity = 215/254 (84.65%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Carg15703 vs. ExPASy TrEMBL
Match: A0A6J1EXL2 (protein-tyrosine-phosphatase IBR5-like OS=Cucurbita moschata OX=3662 GN=LOC111437111 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121 Identity = 215/254 (84.65%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Carg15703 vs. TAIR 10
Match: AT2G04550.1 (indole-3-butyric acid response 5 ) HSP 1 Score: 304.3 bits (778), Expect = 8.8e-83 Identity = 150/243 (61.73%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of Carg15703 vs. TAIR 10
Match: AT2G04550.3 (indole-3-butyric acid response 5 ) HSP 1 Score: 268.1 bits (684), Expect = 7.0e-72 Identity = 122/161 (75.78%), Postives = 144/161 (89.44%), Query Frame = 0
BLAST of Carg15703 vs. TAIR 10
Match: AT3G23610.1 (dual specificity protein phosphatase 1 ) HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Carg15703 vs. TAIR 10
Match: AT3G23610.2 (dual specificity protein phosphatase 1 ) HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Carg15703 vs. TAIR 10
Match: AT3G23610.3 (dual specificity protein phosphatase 1 ) HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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