Carg15666 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15666
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein CONSTANS-LIKE 5-like
Location	Carg_Chr19: 8994928 .. 8996167 (-)
RNA-Seq Expression	Carg15666
Synteny	Carg15666

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGGGCAGCAATGTTTGCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGCCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCACCCCAATATTGTTGTGATGATAAACCACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGATGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATGAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGTATGTCCACCCATCTCTTTCTTTTGAAGGATACAGATTAAAGACAAAATTTTAAATTTTGATTTTATAATGTGATATTTATTTACATCCTTGGATGTGGATGAACTTAATGATATAGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCAAACGTGAAGGTTGGCCGCTACTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGCTACTTGAAGAAAAGAAACCAAAGAAATTTCACCAAAACCATAAAGGTATCCACGTTAAAATCAACATATGGAGATCTATTTTTTACTTATAAACCCATGATCAAACCCCTGGATAGATAGTTGACGTGGGACTTCTCTCCTAATAATTCTCAACAATATTGATATATCATTCGTTTATGTAAAACAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTGCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAAGAACCTAATCCAGCAAAGAATGATACTTGTATTCTTCACATGGACAATGAATTAGTATACAACCATGAGTTGGGTGTCCAGGTATAAAAAAAAAGATCCGAAAAAGCCAAGTGGTTAAGGTTTCTTTGTTCCAAAAGCTCTCTCCTCCAAGTTTTTTCTTGCTTCTTTTACTTGTTTCGACATATTTCGATCGATGGTCAAATCCAACACGAAAACCCCTCCAACCCACGTCCCATTATGCTTCTAATTCAATTATGATAAAATGTTCATCATTTTTGCAGTTGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAGTAGCTGA

mRNA sequence

ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGGGCAGCAATGTTTGCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGCCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCACCCCAATATTGTTGTGATGATAAACCACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGATGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATGAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCAAACGTGAAGGTTGGCCGCTACTCTGAAGAATATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTGCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAAGAACCTAATCCAGCAAAGAATGATACTTGTATTCTTCACATGGACAATGAATTAGTATACAACCATGAGTTGGGTGTCCAGTTGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAGTAGCTGA

Coding sequence (CDS)

ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGGGCAGCAATGTTTGCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGCCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCACCCCAATATTGTTGTGATGATAAACCACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGATGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATGAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCAAACGTGAAGGTTGGCCGCTACTCTGAAGAATATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTGCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAAGAACCTAATCCAGCAAAGAATGATACTTGTATTCTTCACATGGACAATGAATTAGTATACAACCATGAGTTGGGTGTCCAGTTGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAGTAGCTGA

Protein sequence

MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHPPSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGLVPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEEYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKDEEEWEQEMRSLMYLPYISS

Homology

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BLAST of Carg15666 vs. NCBI nr
Match: KAG7012060.1 (hypothetical protein SDJN02_26968, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 505.0 bits (1299), Expect = 3.5e-139
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEEYACRKTLADRRIRVRGRFARN 180
           VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEEYACRKTLADRRIRVRGRFARN
Sbjct: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEEYACRKTLADRRIRVRGRFARN 180

Query: 181 NEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKDEEEWEQEMRSLMYLPYISS 237
           NEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKDEEEWEQEMRSLMYLPYISS
Sbjct: 181 NEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKDEEEWEQEMRSLMYLPYISS 236

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BLAST of Carg15666 vs. NCBI nr
Match: XP_022952990.1 (uncharacterized protein LOC111455505 [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 230/259 (88.80%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPSPQYCCDDK PPP LSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSPQYCCDDK-PPPTLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPEMKPLHQPLPPHNWEIQSNEVPVAEDSN+KV RYSEE                     
Sbjct: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNMKVARYSEEVRKQRILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 240

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BLAST of Carg15666 vs. NCBI nr
Match: XP_023511729.1 (uncharacterized protein LOC111776500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 227/259 (87.64%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFYSDYTPTGAAMF NDLYDLPPPTTPSTA TPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPS QYCCDDK PPPPLSSAIDPTSFPQLNIPSINGG QNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSSQYCCDDK-PPPPLSSAIDPTSFPQLNIPSINGGRQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPE+KPLHQPLPPHNWEIQSNEVPVAEDSN+KVGRYSEE                     
Sbjct: 121 VPEIKPLHQPLPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQ+KKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQMKKD 240

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BLAST of Carg15666 vs. NCBI nr
Match: XP_022969399.1 (uncharacterized protein LOC111468419 [Cucurbita maxima])

HSP 1 Score: 468.4 bits (1204), Expect = 3.7e-128
Identity = 226/259 (87.26%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFY DYTPTGAAMF NDLYDLPPPTTPSTA TPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYPDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPS QYCCDDK P PPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSAQYCCDDK-PSPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPE+KPL+QPLPPHNWEIQSNEVPVAEDSN+KVGRYSEE                     
Sbjct: 121 VPEIKPLYQPLPPHNWEIQSNEVPVAEDSNIKVGRYSEEVRKERILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 240

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BLAST of Carg15666 vs. NCBI nr
Match: KAG6572460.1 (Zinc finger protein CONSTANS-LIKE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125
Identity = 223/259 (86.10%), Postives = 225/259 (86.87%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFYSDYTPTGAAMF NDLYDLPPPTTPSTA TPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPEMKPLHQPLPPHNWEIQSNEVPVAEDSN+KVGRYSEE                     
Sbjct: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNEL         LKKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNEL---------LKKD 240

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BLAST of Carg15666 vs. ExPASy TrEMBL
Match: A0A6J1GNF3 (uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC111455505 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.2e-130
Identity = 230/259 (88.80%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPSPQYCCDDK PPP LSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSPQYCCDDK-PPPTLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPEMKPLHQPLPPHNWEIQSNEVPVAEDSN+KV RYSEE                     
Sbjct: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNMKVARYSEEVRKQRILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 240

[Close]

BLAST of Carg15666 vs. ExPASy TrEMBL
Match: A0A6J1I2H1 (uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.8e-128
Identity = 226/259 (87.26%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MASIPQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGEETLVPLFHEFGLLHP 60
           MASIPQFY DYTPTGAAMF NDLYDLPPPTTPSTA TPGGPFWGEETLVPLFHEFGLLHP
Sbjct: 1   MASIPQFYPDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLLHP 60

Query: 61  PSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120
           PSLSPS QYCCDDK P PPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL
Sbjct: 61  PSLSPSAQYCCDDK-PSPPLSSAIDPTSFPQLNIPSINGGCQNSCLDHHFHEFQDDCFGL 120

Query: 121 VPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------------------- 180
           VPE+KPL+QPLPPHNWEIQSNEVPVAEDSN+KVGRYSEE                     
Sbjct: 121 VPEIKPLYQPLPPHNWEIQSNEVPVAEDSNIKVGRYSEEVRKERILRYLKKRNQRNFTKT 180

Query: 181 --YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 237
             YACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD
Sbjct: 181 IKYACRKTLADRRIRVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKD 240

[Close]

BLAST of Carg15666 vs. ExPASy TrEMBL
Match: A0A6J1ES17 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437041 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.9e-64
Identity = 149/273 (54.58%), Postives = 172/273 (63.00%), Query Frame = 0


Query: 1   MASIPQ-FYSDYTPTGAAMFANDLYD-LPPPTTPSTAATPGGPFWGEETLVPLFHEFGLL 60
           MASIPQ FY+DYT T  ++  ND  +  PPPT P   A  GG  WGEET VPLF +FGL 
Sbjct: 1   MASIPQFFYTDYTTTTTSIIPNDFCEQRPPPTAP---ALGGGVLWGEETSVPLFDDFGLH 60

Query: 61  HPPSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSI-----NGGCQNSCL-----DH 120
           H P +SPS QY        P      D  + PQLN PSI        CQ+ C+     DH
Sbjct: 61  HQPPISPS-QYSSHKPGLTPTSFPHQDMIALPQLNTPSICATNNAAPCQSFCVGYQPDDH 120

Query: 121 HFHEFQDDCFGLVPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------- 180
              ++ DDCF LVPE +PL+ PLPP NWEIQS++VPV+EDSN+KVGRYSEE         
Sbjct: 121 PLFQYPDDCFRLVPETEPLYHPLPPDNWEIQSSQVPVSEDSNMKVGRYSEEVRKERILRY 180

Query: 181 --------------YACRKTLADRRIRVRGRFARNNEACDQEPNPAK-NDTCILHMDNEL 237
                         YACRKTLADRRIRVRGRFARNNEACDQ+ NP K N TCI   D +L
Sbjct: 181 LKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTCIHKADTQL 240

[Close]

BLAST of Carg15666 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.9e-62
Identity = 147/273 (53.85%), Postives = 171/273 (62.64%), Query Frame = 0


Query: 1   MASIPQ-FYSDYTPTGAAMFANDLYD-LPPPTTPSTAATPGGPFWGEETLVPLFHEFGLL 60
           MASIPQ FY+DYT T  ++  ND  +  PPPT P      GG  WGEETLVPLF +FGL 
Sbjct: 1   MASIPQFFYTDYTAT-TSLIPNDFCEQRPPPTAPPLG---GGVLWGEETLVPLFDDFGLH 60

Query: 61  HPPSLSPSPQYCCDDKPPPPPLSSAIDPTSFPQLNIPSI-----NGGCQNSCL-----DH 120
           H P +SPS QY        P      D  + P+LN PS+        CQN C+     DH
Sbjct: 61  HQPPISPS-QYSSHKPGLTPTSFPHQDMIALPELNTPSMCATNNAAPCQNFCVGYQPDDH 120

Query: 121 HFHEFQDDCFGLVPEMKPLHQPLPPHNWEIQSNEVPVAEDSNVKVGRYSEE--------- 180
              ++ DDCF LVPE +PL+ PLPP NWEIQSN+VPV+EDSN+KVGRYSEE         
Sbjct: 121 PLFQYPDDCFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRY 180

Query: 181 --------------YACRKTLADRRIRVRGRFARNNEACDQEPNPAK-NDTCILHMDNEL 237
                         YACRKTLADRRIRVRGRFARNNEACDQ+ NP K N T I  +D +L
Sbjct: 181 LKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQL 240

[Close]

BLAST of Carg15666 vs. ExPASy TrEMBL
Match: A0A5D3BX03 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00030 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.4e-48
Identity = 141/276 (51.09%), Postives = 163/276 (59.06%), Query Frame = 0


Query: 1   MASI--PQFYSDYTPTGAAMFANDLYDLPPPTTPSTAATPGGPFWGE-----ETLVPLFH 60
           MASI   QFY D   T +A          PP T ++    GGPFWG+     + LVPL  
Sbjct: 1   MASIIPDQFYYDDHYTSSA---------APPPTAASVGIGGGPFWGDHDETADNLVPLLE 60

Query: 61  E--FGLLHPPSLSPSPQYCCDDKPPPPPLSSAIDPT--SFPQLN-IPSI---------NG 120
           +  FG LH       P    D      P S  IDP   SFPQ + +PS          N 
Sbjct: 61  DDNFGALHRRRRHHQPY--TDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNN 120

Query: 121 GCQNSCLDHH------------FHEFQDDCFGLVPEMKPL---HQPLPPHNWEIQSNEVP 180
              +SC D +            F+EFQDDCFGLVPE+KP    + PLP HN + QSN+V 
Sbjct: 121 ARGSSCQDFNCHLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVS 180

Query: 181 VAEDSNVKVGRYSEEYACRKTLADRRIRVRGRFARNNEA-CDQEPNPA--KNDTCILHMD 237
           VAEDSN+KVGRYSEEYACRKTLADRRIRVRGRFARNNEA  DQE NP    NDT I   D
Sbjct: 181 VAEDSNMKVGRYSEEYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMNNDTTI-QKD 240

[Close]

BLAST of Carg15666 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 51/170 (30.00%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 92  LNIPSINGGCQNSCLDHHFHEF----QDDCFGLVPEMKPLHQPLP-PHNWEIQSNEVPVA 151
           +++P  N   Q   +++  H F      + +G  PE+KPL +P     +W   ++E  + 
Sbjct: 67  VSVPEYNNYYQKMSVNNATHYFHGGDHQEYYGFSPEIKPLFRPATGEQSW--GNSEGGIQ 126

Query: 152 EDSNVKVGRYSEE-----------------------YACRKTLADRRIRVRGRFARNNEA 211
            + N KVGRYS E                       Y CRKTLADRR+RVRGRFARNN+ 
Sbjct: 127 AEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDT 186

Query: 212 CDQEPNPAKNDTCILHMDNELVY-NHELGVQLKKDEEEWEQEMRSLMYLP 233
           C+++P+ +KN       + ++   + +  +Q++ D+    + M +L+  P
Sbjct: 187 CEEQPHMSKNHNNHSEKEEDMFSGSDDYLIQMEHDDGWLHEAMSNLIPFP 234

[Close]

BLAST of Carg15666 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 139 QSNEVPVAEDSNVKVGRYSEE-----------------------YACRKTLADRRIRVRG 198
           +++ +P +E+ N KVGRYS E                       YACRKTLAD R R+RG
Sbjct: 193 ENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRG 252

Query: 199 RFARNNEACDQEPNPAKNDTCILHMD 202
           RFARN+E   + PN   +D+ +  +D
Sbjct: 253 RFARNDEVV-EIPNIEDDDSELWKLD 277

[Close]

BLAST of Carg15666 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-05
Identity = 53/169 (31.36%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 80  LSSAIDPTSFPQLNIPSINGG--CQNSCL------DHHFHEFQDDCFGLVPEMKPLHQP- 139
           L S   P+    + I + NGG  C +         DHH         G+  +   + QP 
Sbjct: 206 LGSDFKPSHDQLMEIQADNGGLFCPDPIKPIFNPGDHHLQGLD----GVENQNHMVAQPV 265

Query: 140 LPPHNWEIQSNEVP--------VAEDSNVKVGRYSE-----------EYACRKTLADRRI 199
           LP    EI   + P         AE    K+ RY +           +YACRKTLAD R 
Sbjct: 266 LPQLGTEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRP 325

Query: 200 RVRGRFARNNEACDQEPNPAKNDTCILHMDNELVYNHELGVQLKKDEEE 221
           RVRGRFA+N+E    EPN      C  H +++   + ++GV   K+EE+
Sbjct: 326 RVRGRFAKNDEF--GEPN---RQACSSHHEDD---DDDVGV---KEEEQ 359

[Close]

BLAST of Carg15666 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-05
Identity = 26/59 (44.07%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 147 EDSNVKVGRYSEE-----------------------YACRKTLADRRIRVRGRFARNNE 183
           ++ +++VGRYS E                       YACRKTLAD R RVRGRFARN+E
Sbjct: 178 DEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDE 236

[Close]

BLAST of Carg15666 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 0


Query: 159 EYACRKTLADRRIRVRGRFARNNEACDQE 188
           +Y CRKTLAD R R+RGRFARN+E   QE
Sbjct: 184 KYECRKTLADSRPRIRGRFARNDEISQQE 212

The following BLAST results are available for this feature:

BLAST of Carg15666 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012060.1	3.5e-139	100.00	hypothetical protein SDJN02_26968, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022952990.1	1.5e-129	88.80	uncharacterized protein LOC111455505 [Cucurbita moschata]	[more]
XP_023511729.1	1.7e-128	87.64	uncharacterized protein LOC111776500 [Cucurbita pepo subsp. pepo]	[more]
XP_022969399.1	3.7e-128	87.26	uncharacterized protein LOC111468419 [Cucurbita maxima]	[more]
KAG6572460.1	1.7e-125	86.10	Zinc finger protein CONSTANS-LIKE 1, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Carg15666 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15666 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNF3	7.2e-130	88.80	uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A6J1I2H1	1.8e-128	87.26	uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419...	[more]
A0A6J1ES17	6.9e-64	54.58	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JLF7	4.9e-62	53.85	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A5D3BX03	2.4e-48	51.09	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Carg15666 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	1.0e-14	30.00	activator of spomin::LUC2	[more]
AT5G41380.1	1.5e-07	38.37	CCT motif family protein	[more]
AT1G04500.1	7.2e-05	31.36	CCT motif family protein	[more]
AT1G63820.1	7.2e-05	44.07	CCT motif family protein	[more]
AT5G59990.1	1.6e-04	68.97	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 159..180 e-value: 8.1E-7 score: 29.0
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..159 coord: 160..236
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..159 coord: 160..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15666-RA	Carg15666-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding