Carg15606 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15606
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Carg_Chr11: 11085349 .. 11088116 (-)
RNA-Seq Expression	Carg15606
Synteny	Carg15606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATTGGCGGGCCCGGCTCGAGGTTGTGGCGAATTGCGAATTCTAGGGTTTAAGGGCGCCATTTTTCCGTTCTCGGCGCTGCGAAACCAGCGAGCATCAACACATGTCTTCTAGGGCTTAGTCATTTTTCTTGTTCATTTCTCTTAATCCTCCCTCTCTTCAAGCTCGTCTGTTCCATTAATGTCGGAAAACTCCATGGATTCCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGATGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGTAAGTTATCATTGTCGGGGTTATTTTTTTTGTTTTTGGAGTATTTTGTGGTGCGGGAATGGGGTTCGTGATGAAATCGCGGAAATAGGGTTCTGACGTTTGGTTTTATGTTTTTTGATCCGTGTTTTTTGGTTATTTGAATGCTGCTGCAGGAAAATCTTCGTTGGAGGTTTACCGAGGGAAACAACTTCCGGTTAGTTTTTTCGTACGGTTGTGCCTTTCCTATGAATTGTTGTTTTGTTGTTATTGTAATAGTGGGGGTTTCAATTGATTATTTTGCAGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATGATTAATGGGAAACAAGTAGGCCTGCATTTAGTGTTGATTTTGAGTTGGCTGTTAGGTTTCAATGATTTCAAGCTCAAACTTTCACTCAACTTTAGGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCAAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGGTAACTTATTGTTTACATGAATGATTGTTTAGATGGTACTATGAGGTATAGCGTGCTCACTTTTTAAGTGTCAAGCAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTTAGCAGAGTTCTTTCCTAGCTGAACTAATCTCACATTTTCACTTTCTATCTTTTATAGAAAATAATTTATGTACACAGGATTTTAGATTCTATTTACCAATGGGCTAGTTGTTTTTGATGAATTATCAATTCTGTTTGAGCAATGGACGAACTTGTGGTTGCATGGCCTTCGTATTTATTTTGTCGATCAATTTCTTGGATTTTGGAATCTGAACCTTTTTCTAACAAATATGATACTAAAGAGAGATTTGATTTGAAAAGTCCAAAAGTTCTGGCTTAGTAGTCAGTATTTCTTATTAGTTCCACTTCGAACCTGTCATTCAATCAAGTTCTAAATTTCTTAATCTCTATATATGTACGTGAATACAATTTACTGAACTAAGGCGAAGTTACCCCATGGCACCAGATTATTCAATTGAGAAGTCTATAGGAAGCCTCAAATTCATTTCTTGCGAGAGTTGCTCAGGGTTCATCTGGAGTGAAGTTTGAAAAAGTTTTAAATCTTTGAAATCTATTTTGCAAAATGATTTTGGAAACCACTACGCTCAGGGTTCATCTGGAGTGAAGTTTGAAAAAGTTTTAAATCTTTGAAATCTATTTTGCAAAATGATTTTGGAAACCACTAGTAAGCGAGGAAAAATGTAAACTAGTAGGAAATGGTATATATATATATATTGAAGCAGTGCTGCGTATTGTTTGATTACTTTTACCAGTTTATTGACTCTAATACTAAAACATTTTAAACTGAGAAAATCAAAGTGAATGGAATCAACTTTTGAACATTTTCATAATCAAAGCTCATTCGATCACTGCCGTTGTCTCTTACTGAAAGCCATTTTTTTTCAATCACATGCTTATCAAATTAAGATACATGTTGAAAAGAAAAGGTTAATTGCAATGAGGTTTTATATCGGTTCCTGTATGGTTTTTTCATTGTATTGGTCATGTTGAAAAGAATAGAAATTATTTACTAAATATATTCATCAGTTGAAGTCAATTTTAACAGTTAAGATTAATGCTTCTTTGTTTTAAAGGTGGAGATCAAGAAGGCCGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGGGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGAGCTGGCTTTAGCAGAGGTTATGATTTGAGAGGCGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACAGCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCGATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAACTGGTCGTTATCATCCTTATGGACGGTAG

mRNA sequence

TGAATTGGCGGGCCCGGCTCGAGGTTGTGGCGAATTGCGAATTCTAGGGTTTAAGGGCGCCATTTTTCCGTTCTCGGCGCTGCGAAACCAGCGAGCATCAACACATGTCTTCTAGGGCTTAGTCATTTTTCTTGTTCATTTCTCTTAATCCTCCCTCTCTTCAAGCTCGTCTGTTCCATTAATGTCGGAAAACTCCATGGATTCCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGATGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTCGTTGGAGGTTTACCGAGGGAAACAACTTCCGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATGATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCAAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGAGATCAAGAAGGCCGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGGGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGAGCTGGCTTTAGCAGAGGTTATGATTTGAGAGGCGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACAGCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCGATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAACTGGTCGTTATCATCCTTATGGACGGTAG

Coding sequence (CDS)

ATGTCGGAAAACTCCATGGATTCCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGATGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTCGTTGGAGGTTTACCGAGGGAAACAACTTCCGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATGATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCAAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGAGATCAAGAAGGCCGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGGGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGAGCTGGCTTTAGCAGAGGTTATGATTTGAGAGGCGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACAGCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCGATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAACTGGTCGTTATCATCCTTATGGACGGTAG

Protein sequence

MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGYDGAGSTPTGRYHPYGR

Homology

[Close]

BLAST of Carg15606 vs. NCBI nr
Match: KAG7022708.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 745.3 bits (1923), Expect = 2.5e-211
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPTGRYHPYGR 384
           RGGGGGYDGAGSTPTGRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPTGRYHPYGR 383

[Close]

BLAST of Carg15606 vs. NCBI nr
Match: XP_023530403.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.2 bits (1894), Expect = 5.8e-208
Identity = 380/387 (98.19%), Postives = 382/387 (98.71%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGKQVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAG YDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGIYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R----GGGGGYDGAGSTPTGRYHPYGR 384
           R    GGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGGGGGYDGAGSTPSGRYHPYGR 387

[Close]

BLAST of Carg15606 vs. NCBI nr
Match: XP_022989120.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 733.4 bits (1892), Expect = 9.9e-208
Identity = 376/383 (98.17%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYSAYN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPTGRYHPYGR 384
           RGGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPSGRYHPYGR 383

[Close]

BLAST of Carg15606 vs. NCBI nr
Match: XP_022928542.1 (heterogeneous nuclear ribonucleoprotein A3-like [Cucurbita moschata])

HSP 1 Score: 733.0 bits (1891), Expect = 1.3e-207
Identity = 380/388 (97.94%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGKQVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYDLRGGYGGPDESYS YNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R-----GGGGGYDGAGSTPTGRYHPYGR 384
           R     GGGGGYDGAGSTPTGRYHPYGR
Sbjct: 361 RGGGGGGGGGGYDGAGSTPTGRYHPYGR 388

[Close]

BLAST of Carg15606 vs. NCBI nr
Match: KAG6588940.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731.9 bits (1888), Expect = 2.9e-207
Identity = 380/390 (97.44%), Postives = 382/390 (97.95%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGKQVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSY+MGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYNMGIGAGYPAGGRGSIYGS 360

Query: 361 R-------GGGGGYDGAGSTPTGRYHPYGR 384
           R       GGGGGYDGAGSTPTGRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGYDGAGSTPTGRYHPYGR 390

[Close]

BLAST of Carg15606 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 147/398 (36.93%), Postives = 209/398 (52.51%), Query Frame = 0


Query: 46  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE 105
           GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DSHMINGKQVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ ++V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGGGY 285
           A PK ANP               + Y  +  SY G             G+    +G  GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYRED----P 345
           G G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Sbjct: 246 GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPA 305

Query: 346 SMGY-SARYGAGFSR-GYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIG------ 383
           S GY +  YG+G +  GY + G    P +S S Y++ G    GGY+GS D G G      
Sbjct: 306 SSGYGNPGYGSGAAHSGYGVPGA-APPTQSPSGYSNQGY-GYGGYSGS-DSGYGNQAAYG 365

[Close]

BLAST of Carg15606 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 132/350 (37.71%), Postives = 171/350 (48.86%), Query Frame = 0


Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-E 106
           K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 107 DSHMINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F +YG+++  
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKALSKQ-EMQSAGSQ 215

Query: 227 RYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGY 286
           R    R   SG +    G FGGG  GG F  GG +G RGG  GG GG    YGG D  GY
Sbjct: 216 R---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD-GGY 275

Query: 287 GMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGY 346
             +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Sbjct: 276 NGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFGGGNY 335

Query: 347 AG--------------SYDMGIGAGYPAGGR------GSIYGSRGGGGGY 368
            G                + G   G   GGR      G  YGS GG GGY
Sbjct: 336 GGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGY 374

[Close]

BLAST of Carg15606 vs. ExPASy Swiss-Prot
Match: Q6URK4 (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 132/350 (37.71%), Postives = 171/350 (48.86%), Query Frame = 0


Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-E 106
           K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 107 DSHMINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F +YG+++  
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKALSKQ-EMQSAGSQ 215

Query: 227 RYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGY 286
           R    R   SG +    G FGGG  GG F  GG +G RGG  GG GG    YGG D  GY
Sbjct: 216 R---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD-GGY 275

Query: 287 GMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGY 346
             +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Sbjct: 276 NGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFGGGNY 335

Query: 347 AG--------------SYDMGIGAGYPAGGR------GSIYGSRGGGGGY 368
            G                + G   G   GGR      G  YGS GG GGY
Sbjct: 336 GGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGY 374

[Close]

BLAST of Carg15606 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-32
Identity = 124/346 (35.84%), Postives = 170/346 (49.13%), Query Frame = 0


Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE- 106
           K+F+GGL  ETT     +HF ++G +TD V+M+D  T   RGFGFVTYA    VD  +  
Sbjct: 15  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query: 107 DSHMINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F QYG+++  
Sbjct: 75  RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           +IM D  + + RGF F+TF+   +VD+++         G   E++KA  K+     + S+
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYH-TVNGHNCEVRKALSKQEMASASSSQ 194

Query: 227 RYHDSRPSYSGGYGDAY---------GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGS 286
           R      ++ GG G  +         G F G G  GG R GG YG  G  Y G+G  GG 
Sbjct: 195 RGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGY 254

Query: 287 DFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRG-GYGGPDESYSAYNSGGAPN 346
              G G                G S  YG+G  +GY  +G GYGG   SY +YN+GG   
Sbjct: 255 GGGGPGY--------------SGGSRGYGSG-GQGYGNQGSGYGG-SGSYDSYNNGGGGG 314

Query: 347 TGGYAGSYDMGIGAGYPAGGRGSIYGSRGG---GGGYDGAGSTPTG 377
            GG +GS + G G  Y   G  +   S  G   GG + G  S P G
Sbjct: 315 FGGGSGS-NFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYG 342

[Close]

BLAST of Carg15606 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31
Identity = 131/349 (37.54%), Postives = 170/349 (48.71%), Query Frame = 0


Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-E 106
           K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 107 DSHMINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F +YG+++  
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKALSKQ-EMQSAGSQ 215

Query: 227 RYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGY 286
           R    R   SG +    G FGGG  GG F  GG +G RGG  GG GG    YGG D  GY
Sbjct: 216 R---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD-GGY 275

Query: 287 GMYGTSSIGAYREDPSMGYSARYG-AGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYA 346
             +G    G Y   P  GYS+R G  G   GY  +GG  G    Y  YN GG    G Y 
Sbjct: 276 NGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYG 335

Query: 347 G--------------SYDMGIGAGYPAGGR------GSIYGSRGGGGGY 368
           G                + G   G   GGR      G  YGS GG GGY
Sbjct: 336 GGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGY 373

[Close]

BLAST of Carg15606 vs. ExPASy TrEMBL
Match: A0A6J1JLH8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486284 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 4.8e-208
Identity = 376/383 (98.17%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYSAYN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPTGRYHPYGR 384
           RGGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPSGRYHPYGR 383

[Close]

BLAST of Carg15606 vs. ExPASy TrEMBL
Match: A0A6J1EK86 (heterogeneous nuclear ribonucleoprotein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111435320 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.3e-208
Identity = 380/388 (97.94%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGKQVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYDLRGGYGGPDESYS YNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R-----GGGGGYDGAGSTPTGRYHPYGR 384
           R     GGGGGYDGAGSTPTGRYHPYGR
Sbjct: 361 RGGGGGGGGGGYDGAGSTPTGRYHPYGR 388

[Close]

BLAST of Carg15606 vs. ExPASy TrEMBL
Match: A0A6J1F7E2 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC111441536 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.9e-189
Identity = 350/393 (89.06%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+H+INGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYD RGGYGGPDESY AYNS  APNTGGYAGSYDMGIG GYP+GGRGS YGS
Sbjct: 301 RYGAGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGS 360

Query: 361 R----------GGGGGYDGAGSTPTGRYHPYGR 384
           R          GGGGGYDGAGS P+GRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 390

[Close]

BLAST of Carg15606 vs. ExPASy TrEMBL
Match: A0A6J1J2Y6 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481383 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.8e-189
Identity = 349/391 (89.26%), Postives = 360/391 (92.07%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+H+INGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKSNPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGAGFSRGYD RGGYGGPDESY AYNS  APNTGGYAGSYDMGIG GYP+GGRGS YGS
Sbjct: 301 RYGAGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGS 360

Query: 361 R--------GGGGGYDGAGSTPTGRYHPYGR 384
           R        GGGGGYDGAGS P+GRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 388

[Close]

BLAST of Carg15606 vs. ExPASy TrEMBL
Match: A0A0A0LG75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.6e-187
Identity = 346/386 (89.64%), Postives = 359/386 (93.01%), Query Frame = 0


Query: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+H+INGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG V+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGGGYGG FRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  +GAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGSFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA 300

Query: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGA FSRGYD RGGYGGPDESY AYNSGGAP+TGGYAGSYDMG+G GY AGGRGS YGS
Sbjct: 301 RYGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGS 360

Query: 361 R---GGGGGYDGAGSTPTGRYHPYGR 384
           R   GGGGGYDGAGS P+GRYHPYGR
Sbjct: 361 RGGGGGGGGYDGAGSAPSGRYHPYGR 383

[Close]

BLAST of Carg15606 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 385.6 bits (989), Expect = 4.7e-107
Identity = 247/429 (57.58%), Postives = 284/429 (66.20%), Query Frame = 0


Query: 6   MDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGA-SAGKIFVGGLPRETTSAQFVN 65
           MD    + V   E  DPK S   +D     +P  G G  SAGKIFVGGL RETTSA+F+ 
Sbjct: 1   MDPYGTETVIEDEIHDPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLK 60

Query: 66  HFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRTIPKG 125
           HFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI+D+H+I GKQVEIKRTIP+G
Sbjct: 61  HFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRG 120

Query: 126 SSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFET 185
           S SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE++EHQIMRDHST RSRGFGF+T+E+
Sbjct: 121 SMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYES 180

Query: 186 EQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFG 245
           E  VD LLA GNR+E +G+QVEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   
Sbjct: 181 EDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYGDGYGGGH 240

Query: 246 GGGY---GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYG-TSSIGAYREDPSMGYSA 305
           GGGY   GG +++GG YG  GG  GGYGGYGG +F GYG  G    +G YR +P++GYS 
Sbjct: 241 GGGYGGPGGPYKSGGGYG--GGRSGGYGGYGG-EFGGYGGGGYGGGVGPYRGEPALGYSG 300

Query: 306 RY---GAGFSR-GYDL---------------------RGGYGGPDESY---------SAY 365
           RY   G G++R GY +                      GGYGGP  SY           Y
Sbjct: 301 RYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGY 360

Query: 366 NSG-GAPNTGGY--AGSYDM---------GIGAGYPAGGRGSIYGSRGGGGGYDGAGSTP 384
             G G    GGY   G YDM         G GAG    G GS YG  GG GGY G GS  
Sbjct: 361 GGGMGGAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGGGS-- 420

[Close]

BLAST of Carg15606 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 311.6 bits (797), Expect = 8.7e-85
Identity = 201/365 (55.07%), Postives = 243/365 (66.58%), Query Frame = 0


Query: 32  SRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADPSVVDKVIEDSHMINGKQVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+ADPSVVDKVIED+H+INGKQVEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 211
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QVEIKK
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKK 184

Query: 212 AEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGG--GGYG---GGFRA-GGPYGARGG 271
           AEPKK+     PS   H    S +  Y    G +GG  GGYG   G  R+ GGP     G
Sbjct: 185 AEPKKSLNRSPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAG 244

Query: 272 SYG-GYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSAR---YGAGF-SRGYDLRGGYGG 331
            YG G G  G     GY  YG  S+G YR +P +GYS+R   YG+GF   GY  RGG G 
Sbjct: 245 GYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYG-RGGEG- 304

Query: 332 PDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGYDGAGSTPTGRY 384
              +Y  Y  GG    GGY G    G G  Y +GG G   GS  G GG  G G + + RY
Sbjct: 305 ---AYLGYPRGGGEGYGGYGGP---GYGGAYESGGPG---GSYEGAGGPYGRGYSSSSRY 358

[Close]

BLAST of Carg15606 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 255.0 bits (650), Expect = 9.7e-68
Identity = 120/180 (66.67%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 32  SRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADPSVVDKVIEDSHMINGKQVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+ADPSVVDKVIED+H+INGKQVEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 210
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QV + K
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSLYK 184

[Close]

BLAST of Carg15606 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 208.8 bits (530), Expect = 7.9e-54
Identity = 147/357 (41.18%), Postives = 200/357 (56.02%), Query Frame = 0


Query: 36  RPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYA 95
           R S    +S GK+FVGG+  ETT+  F N+FG++GE+ DSVIM DR TG+PRGFGFVT+A
Sbjct: 56  RHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFA 115

Query: 96  DPSVVDKVIEDSHMINGKQVEIKRTIPKGSSSS---RDFKTKKIFVGGIPTSVDEDEFRD 155
           D +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVGG+P  ++EDE ++
Sbjct: 116 DSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKN 175

Query: 156 FFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEP 215
           +F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E    QVEIK+AEP
Sbjct: 176 YFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEP 235

Query: 216 KKANPPPA----PSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGY 275
           K+     +     +   +D   SYSG   + Y  +   GYGG              YGGY
Sbjct: 236 KRTGRDNSFRSYGASGKYDQEDSYSGKANEDYSMY--SGYGG--------------YGGY 295

Query: 276 GGYGGSDF-SGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSAYN 335
           G Y G+   +  G YG                  YG G+  GY    GYGG       Y 
Sbjct: 296 GAYAGNSMVNPAGFYG------------------YGGGYGYGY----GYGG-QMFNMGYG 355

Query: 336 SGGAPNTGGYAGSYDMGIGAGYPAG---GRGSIYGSRGGGGGYDGAGSTPTGRYHPY 382
           +GG  + G     Y +   A Y  G   G G+   S G G G +G+G     RYHPY
Sbjct: 356 AGGYSHMG---SGYGVAAAAAYGGGKSHGNGNNGSSSGKGNGTNGSG---PDRYHPY 367

[Close]

BLAST of Carg15606 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 165.6 bits (418), Expect = 7.7e-41
Identity = 147/398 (36.93%), Postives = 209/398 (52.51%), Query Frame = 0


Query: 46  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE 105
           GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DSHMINGKQVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ ++V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGGGY 285
           A PK ANP               + Y  +  SY G             G+    +G  GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYRED----P 345
           G G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Sbjct: 246 GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPA 305

Query: 346 SMGY-SARYGAGFSR-GYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIG------ 383
           S GY +  YG+G +  GY + G    P +S S Y++ G    GGY+GS D G G      
Sbjct: 306 SSGYGNPGYGSGAAHSGYGVPGA-APPTQSPSGYSNQGY-GYGGYSGS-DSGYGNQAAYG 365

The following BLAST results are available for this feature:

BLAST of Carg15606 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022708.1	2.5e-211	100.00	Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023530403.1	5.8e-208	98.19	heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022989120.1	9.9e-208	98.17	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]	[more]
XP_022928542.1	1.3e-207	97.94	heterogeneous nuclear ribonucleoprotein A3-like [Cucurbita moschata]	[more]
KAG6588940.1	2.9e-207	97.44	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Carg15606 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.1e-39	36.93	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q8BG05	1.7e-32	37.71	Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P...	[more]
Q6URK4	1.7e-32	37.71	Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrn...	[more]
P09651	3.7e-32	35.84	Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE...	[more]
P51991	1.4e-31	37.54	Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE...	[more]

BLAST of Carg15606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLH8	4.8e-208	98.17	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EK86	6.3e-208	97.94	heterogeneous nuclear ribonucleoprotein A3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F7E2	2.9e-189	89.06	heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J2Y6	3.8e-189	89.26	heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LG75	1.6e-187	89.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1	[more]

BLAST of Carg15606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40490.1	4.7e-107	57.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.2	8.7e-85	55.07	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.1	9.7e-68	66.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G17640.1	7.9e-54	41.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	7.7e-41	36.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 47..118 e-value: 6.2E-22 score: 88.9 coord: 135..208 e-value: 3.0E-20 score: 83.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 48..115 e-value: 2.0E-15 score: 56.4 coord: 136..205 e-value: 3.8E-16 score: 58.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 46..122 score: 16.534245
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 134..212 score: 19.075499
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 45..123 e-value: 8.9E-25 score: 88.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 124..222 e-value: 4.8E-25 score: 90.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR48033:SF5	NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED	coord: 6..383
None	No IPR available	PANTHER	PTHR48033	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..383
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 129..241
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 40..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15606-RA	Carg15606-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0048578	positive regulation of long-day photoperiodism, flowering
biological_process	GO:0048576	positive regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003730	mRNA 3'-UTR binding
molecular_function	GO:0097157	pre-mRNA intronic binding
molecular_function	GO:0003676	nucleic acid binding