Carg15558 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15558
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Plant/MOJ10-14 protein
Location	Carg_Chr11: 10816917 .. 10821546 (-)
RNA-Seq Expression	Carg15558
Synteny	Carg15558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGTAAAAAATGTAATCAATCGCCTCGTCTTGGCGCGTTAGGGGGCCATCGTTTTTCAATTTCTGCCTCTCCTTCCGGCTATGGCGATGAACCAGACCCCTTCTATTCCTTCCATGCTCTCTAGAGACCAATTGTTTCATCTTTTCAATCGCTTTTCTGTCATCGTTTCCCTCTCTGGTTATAATCTAACATTTACTCTCCTCGTTCCTCTGTTTTCCCCTAATCTTTCCCATAAATTAACGTTTTCTTTCTGCATCTGATCTTGCAGATGTGAAGAAACGGATTGCTGATGCTGTTAGGGATGATAATCAGGTGAATGTTCTTCAAAATTTGTTGATAGTTTAGTGATTTTTTGGTTTAGATGGTTTGTTGTTGCTTGTTTTGAAATGGGGTTTGATTGTTTTTCACTTGGAACTAGTTATGTGGATGAACTTCAGTCATTAAGTTGCATAAACACTCTGCCAAATCCTCCATTTGTTTAGGGGAAATGGGTTTGTTCTGTTTGGTTATTAGCTGTTCTGTAATATCCGTGAGGGTTCAATCTCATTAGACAGCTATCTAACTCAATCTGGTTGATAGGAATGACTTTGTAGTGGAATTGGGTTTGGAGGAATGCGTTTTTTAACATCTTCCTCCTCCATCAATCACTGTTCTTGTTGTGTTCTTAACCCTTTTTGTGAGATCCCACGTTGGTTGTAGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTTTCCTAGTAGACGCGTTTTAGAACCTTGGGGAAAACCCAAAGAGGATAATATCTGATAAGGGTGGGCTTGAACTATTACAAATGGTATTAGAGCCAGACACTGAGCGGTGTGTCAGTAAGGACGTTGGGCTCCAAGGGAGATGGATTGTGAGAACGAAACATTGTTTATAAGGGTGTAGAAACCTCTCCCTAATAGACGCTTTTTAAAACTTTGAGGGGAAGCTCAGAAGGGAATGCCCAAAGAGGATAATATTTGCTAGTGGTGGGCGTGGACTGTTACAAATGGTAACAGAGCCAAACACCGGACAGTGTGCCAGCGAGAGCGCTGGGCTCCAAGGGGGTGGATTGTGAGATCTCGCATTGGTTGGAGAAGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAACCTTGAAGGAAAGCCCAAAGGGGACAATATCTGCTAGTGGTGGACTTGGGATGTTACAAATGGTATCAAAGACAGACACCAGGCGGTGTATCAGCAAGGACGTTGGGCCCCAATGGGGGTGAATTGTGAGATCCCACGTTGGTTGGAGAAGAGAACGAAACATTCCTTATAAGGGTATGGAAGCCTCTCTCTAGTATGCACGTTTTAAAACCTTGAGGAAAAACCCAGAAGGGAAAGTCCCAAGAGGACAATATCTGCTAGCAGTGGGCTTGAACTGTTACAAATGGTATTAGAGCTAGACACCGCCCGGTGTGCCAGCGAGGGGATTGTGAGATCCCACATTGGTTGGAGAGGAAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGTAGGCGCGTTTTAAAACCTTAAGGGAAAGCCCAAAAGAGAGCGCAAAAAAGACAATATCTGCTAGCGGTGGACTTGGGGTATTACACCTTTTCGTTTTGTTGTTATGTTATGTACTTTTAGGTTCATTCTTTAATTCGGGGTTTCACAGACCATATAAATTTGTTAATAATGTATGAAGTTGTGATGGTGCAACTGTAGATGATGAGAAGCTTTTTATTGCCTTCTGCAGGAAGCTGTAGCAGTGACAACCGCTATTCAGGAAGAGATATTTTCTGAAATGGGAATTGGTCAGTCTTTTCCAGGCCATTACTGTTTGTTTCTTTGTCGTTTTCTTTGAACATTGTTAAAAGACGTGTTTTAAAATCGTGAGGCTGACAGTGACATGTAATGGGCCAAAGCGGACAATATTTATTAGCAGTGGGCTTGAACTGTTATAAATAGTATTAGAGTCAGACACCGAGCGGTGTGCTATTGAGGACACTGGCCTTCAAAGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAGTAGATCATTCCTTATAAGGGTGTGAAAATCTCTCCCTAAAAGTTGCGTTTTAAAACCGTGAGGCTGACAACGATACGTAACGGGTCAAAGAGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTATAAATGGTATTAGAGCTAGACACTGAGTAGTGTACCAGCGAGGACATTGGCCTCCAAAGGAGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAGCAAATCATTCCTTGTAAGGGTGTGGAAACCTCTCCTTAAAAGATGCATTTTAAAATCGTGAGGTTGACAACGACACGTAATGGGCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAAGGTATTGAGCTATGGGTTTGTGCCAGCGAGGACATGGCGAGGGTGATTGTGAGATCCACGTCGGTTGGACACGTGTGGAATGGGCCAATGGGCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTAGATCCCACGTCGGTTGGAGAGGAGCAAATCATTCCTTATAAGGGTGTGGAAACTTCTCCCTAAAAGATGCATTTTAAAATCGTGAGGCTGACAACGACACGTAATGGGCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGGGTGGTGTGCTAGCGAGGACACTGGCCTCCAAAGAGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGGGAACGAAGTAGTGGAAACCTCTCCCTTAAAGATGCGTTTTAAAACCGTGAGGCTGATGGTGATACATTATAGGCCAAAACGGACAATATCTATTAGTGGTGGGCCTGAGCTGTTACAAATGGTATTAGAGCTAAACATTGGGTGGTGTGCTAATGAGGAAGGGGATGGATTATGAGATCCTACATTGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCAAAAAAATGCGTTTTAAAATCATGAGGCTGACAGCCACACGTAATGGGCCAAAGCGGACAATATTTGTTAGTGGTGGGCTTGGACTCTTATAAATGGTATTAGAGTCAGACACTGGGCGGTGTGCTGTCGAGGACGCTGGGCCCCCAAAGGAGGTGGACTGTGAGATCCCACATCGGTTGGAGAGGGGAGCAAATCGTTCCTTACAAGGGTGTGGAAATCTCTCCCTAAAAGTTGCATTTTAAAACCGTGAGGCTAATAGCGATACGTAACGGACAAAAGCGGACAATATCTGTTAGTGGTGGGCTTGGGTTGTTACAAATGGTATTAGAGTCAGATACTGGGTAGTGTGCCAGCGAGGACGTTGCCCTCCTCCAAAGAGGGTGAATTGTGAGATCCCACATCGGTTGGAGAAGGGAGCGAAACATTCTTTTTAAGGGTGTGAATATTTATCCCTGAAAGACGCGTTTTAAAATCGTGAGATTGACGGCGATATGTAACGGACCAAAGCGGACAATACCTGTTAGCGGTGGACTTGAGCTGTTACAGAACAATACGAGAGCATTGTTGTCTGAGTTTAGTATATGGAGTGAGAAAATTCAACTTCTAATCTCTTATTCGAGAGTATATGCTTTATCTAATTGATCTAAGCTCGGGATGAGTAGATAAGGACATGGTTAACGAACTTTCCTTTCTATCAGTAGTGTTGTGCTATTTGCTTATAAACCAATAACCCAACACATCCGGGCTTTCTTCGATCATTATGTTCTACAGATTCACGATTCGGCATATCCTGCTTAGGGAAAGTGAATTCATTTTACGAGAACGATCTCGAGCTGATGGTTCGTTTCTACAAGTTCGTTGCAGCGTAAGTCGTCTCCAATTCATATTGAACTCGGTTTTCAAATATTCTTTTTGGATTAAATGAACTTATGACAGGGAAGAGATGGCATGTGATGAAGCTGAGCTTGAACCATATGAGTTTGCTGAAAAGATGAACAATGAACACCAACTACACAAAATGGTGAACTACCAAACTCTTCTCCACAATTCTTTTGAATAGCAATTGTGTTCTTGGAAACTGAATGAACGTTTCATATAGCAACTCGAGATGTTGAAACACATGCGCACGTTACACTCGGACGACCAGTCCGCTATTCTCGACAAGGTTTATACTTTTCGCCTTCAACTCACATAGCAAGAGCTAAATATTTTTCAACATGATGAACGAATTGCAATCTGATTAAGTTGTGTTCGTGTTTTTGTTTCTTGTTTTTTCTTTTGTGTCTACAGTTACACGAGCAACTGGAGAGTGCAGAATTCGACAGTTCGGCGTCGATTATGTCGTTGGAAGAGATTCAAGAGATCGTTCAAACAAAAGGTGTCTCTAGTCCGTCTGTAAGTTAAATTTTTTGACATAATGATATGTGAAATGAAATATCTACACTATACAAGAATATGATATGCATTCAAATGCTCGACTTCACCTCCGATCCAAAATACTGAAAATCTCATGGCTTCCTCGATCGTGTT

mRNA sequence

AAAGGGTAAAAAATGTAATCAATCGCCTCGTCTTGGCGCGTTAGGGGGCCATCGTTTTTCAATTTCTGCCTCTCCTTCCGGCTATGGCGATGAACCAGACCCCTTCTATTCCTTCCATGCTCTCTAGAGACCAATTGTTTCATCTTTTCAATCGCTTTTCTGTCATCGTTTCCCTCTCTGATTCACGATTCGGCATATCCTGCTTAGGGAAAGTGAATTCATTTTACGAGAACGATCTCGAGCTGATGGTTCGTTTCTACAAGTTCGTTGCAGCGGAAGAGATGGCATGTGATGAAGCTGAGCTTGAACCATATGAGTTTGCTGAAAAGATGAACAATGAACACCAACTACACAAAATGCAACTCGAGATGTTGAAACACATGCGCACGTTACACTCGGACGACCAGTCCGCTATTCTCGACAAGTTACACGAGCAACTGGAGAGTGCAGAATTCGACAGTTCGGCGTCGATTATGTCGTTGGAAGAGATTCAAGAGATCGTTCAAACAAAAGGTGTCTCTAGTCCGTCTGTAAGTTAAATTTTTTGACATAATGATATGTGAAATGAAATATCTACACTATACAAGAATATGATATGCATTCAAATGCTCGACTTCACCTCCGATCCAAAATACTGAAAATCTCATGGCTTCCTCGATCGTGTT

Coding sequence (CDS)

ATGGCGATGAACCAGACCCCTTCTATTCCTTCCATGCTCTCTAGAGACCAATTGTTTCATCTTTTCAATCGCTTTTCTGTCATCGTTTCCCTCTCTGATTCACGATTCGGCATATCCTGCTTAGGGAAAGTGAATTCATTTTACGAGAACGATCTCGAGCTGATGGTTCGTTTCTACAAGTTCGTTGCAGCGGAAGAGATGGCATGTGATGAAGCTGAGCTTGAACCATATGAGTTTGCTGAAAAGATGAACAATGAACACCAACTACACAAAATGCAACTCGAGATGTTGAAACACATGCGCACGTTACACTCGGACGACCAGTCCGCTATTCTCGACAAGTTACACGAGCAACTGGAGAGTGCAGAATTCGACAGTTCGGCGTCGATTATGTCGTTGGAAGAGATTCAAGAGATCGTTCAAACAAAAGGTGTCTCTAGTCCGTCTGTAAGTTAA

Protein sequence

MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVSSPSVS

Homology

[Close]

BLAST of Carg15558 vs. NCBI nr
Match: KAG7022661.1 (hypothetical protein SDJN02_16395 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 9.7e-74
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDSRFGISCLGKVNSFYENDLELMVRFYK 60
           MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDSRFGISCLGKVNSFYENDLELMVRFYK
Sbjct: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDSRFGISCLGKVNSFYENDLELMVRFYK 60

Query: 61  FVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLE 120
           FVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLE
Sbjct: 61  FVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLE 120

Query: 121 SAEFDSSASIMSLEEIQEIVQTKGVSSPSVS 152
           SAEFDSSASIMSLEEIQEIVQTKGVSSPSVS
Sbjct: 121 SAEFDSSASIMSLEEIQEIVQTKGVSSPSVS 151

[Close]

BLAST of Carg15558 vs. NCBI nr
Match: XP_023529832.1 (uncharacterized protein LOC111792558 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 5.2e-67
Identity = 149/185 (80.54%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMN TPSIPSMLSRDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNHTPSIPSMLSRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQGAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 152
           HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 180

[Close]

BLAST of Carg15558 vs. NCBI nr
Match: XP_022928187.1 (uncharacterized protein LOC111435086 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 4.4e-66
Identity = 148/185 (80.00%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 152
           HQLHKMQLEMLKHMRTL+SDDQSAILDKLHEQLESAEFDS ASIMSLEEIQEIVQTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLNSDDQSAILDKLHEQLESAEFDSLASIMSLEEIQEIVQTKGVS 180

[Close]

BLAST of Carg15558 vs. NCBI nr
Match: KAG6588896.1 (hypothetical protein SDJN03_17461, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.5 bits (659), Expect = 3.7e-65
Identity = 147/185 (79.46%), Postives = 148/185 (80.00%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGIS LGKVN FYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISFLGKVNLFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 152
           HQLHKMQLEMLKHMRTLHSDDQSAILDKLH+QLESAEFDSSASIMSLEEIQEIVQTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHKQLESAEFDSSASIMSLEEIQEIVQTKGVS 180

[Close]

BLAST of Carg15558 vs. NCBI nr
Match: XP_022989727.1 (uncharacterized protein LOC111486726 [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 143/180 (79.44%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMNQTPSIPSML RDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNQTPSIPSMLRRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGISCLGKV SFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISCLGKVTSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 147
           HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEI+QTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEILQTKGVS 180

[Close]

BLAST of Carg15558 vs. ExPASy TrEMBL
Match: A0A6J1EJ73 (uncharacterized protein LOC111435086 OS=Cucurbita moschata OX=3662 GN=LOC111435086 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 148/185 (80.00%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 152
           HQLHKMQLEMLKHMRTL+SDDQSAILDKLHEQLESAEFDS ASIMSLEEIQEIVQTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLNSDDQSAILDKLHEQLESAEFDSLASIMSLEEIQEIVQTKGVS 180

[Close]

BLAST of Carg15558 vs. ExPASy TrEMBL
Match: A0A6J1JGM4 (uncharacterized protein LOC111486726 OS=Cucurbita maxima OX=3661 GN=LOC111486726 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.9e-65
Identity = 143/180 (79.44%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MAMNQTPSIPSMLSRDQLFHLFNRFSVIVSLS---------------------------- 60
           MAMNQTPSIPSML RDQLFHLFNRFSVIVSLS                            
Sbjct: 1   MAMNQTPSIPSMLRRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEI 60

Query: 61  ------DSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120
                 DSRFGISCLGKV SFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE
Sbjct: 61  FSEMGIDSRFGISCLGKVTSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNE 120

Query: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVS 147
           HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEI+QTKGVS
Sbjct: 121 HQLHKMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEILQTKGVS 180

[Close]

BLAST of Carg15558 vs. ExPASy TrEMBL
Match: A0A5D3C4L8 (Plant/MOJ10-14 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001440 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44
Identity = 110/176 (62.50%), Postives = 125/176 (71.02%), Query Frame = 0


Query: 5   QTPSIPSMLSRDQLFHLFNRFSVIVSLSDSR----------------------------- 64
           +TPS PSMLSRDQLFHLF+RFS + SL D +                             
Sbjct: 11  RTPS-PSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQEIFSEMG 70

Query: 65  ----FGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLHK 124
               FGISCLGK++S+YENDLELMV FYKFVA EEMACDEAELEP EFAEKMNN+ +LH 
Sbjct: 71  VDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNNQQKLHD 130

Query: 125 MQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVSS 148
            QLEML+HMR L+SDDQSAIL+KLH+QLES EFDSSASI+S EEIQEIVQ    +S
Sbjct: 131 KQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSPAS 185

[Close]

BLAST of Carg15558 vs. ExPASy TrEMBL
Match: A0A1S3BNJ5 (uncharacterized protein LOC103491795 OS=Cucumis melo OX=3656 GN=LOC103491795 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.0e-44
Identity = 109/177 (61.58%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 5   QTPSIPSMLSRDQLFHLFNRFSVIVSLSDSR----------------------------- 64
           +TP+ PSMLSRDQLFHLF+RFS + SL D +                             
Sbjct: 11  RTPT-PSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQEEIFSEM 70

Query: 65  -----FGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLH 124
                FGISCLGK++S+YENDLELMV FYKFVA EEMACDEAELEP EFAEKMNN+ +LH
Sbjct: 71  GVDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNNQQKLH 130

Query: 125 KMQLEMLKHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVSS 148
             QLEML+HMR L+SDDQSAIL+KLH+QLES EFDSSASI+S EEIQEIVQ    +S
Sbjct: 131 DKQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSPAS 186

[Close]

BLAST of Carg15558 vs. ExPASy TrEMBL
Match: A0A6J1DTQ6 (uncharacterized protein LOC111023401 OS=Momordica charantia OX=3673 GN=LOC111023401 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.6e-44
Identity = 105/170 (61.76%), Postives = 121/170 (71.18%), Query Frame = 0


Query: 12  MLSRDQLFHLFNRFSVIVSLS----------------------------------DSRFG 71
           MLSR QLFHLF+RFS + SLS                                  D++FG
Sbjct: 1   MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG 60

Query: 72  ISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEML 131
           +SCLGKVNSFYEND ELMV FYKF+A EEMACDEAELEP EFAEKM+++ QLH+ QLEML
Sbjct: 61  MSCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML 120

Query: 132 KHMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQEIVQTKGVSS 148
           KHMR LHSDDQ AIL+KLH+QLESAEFD  ASI+S EE+QEIV+ +GVSS
Sbjct: 121 KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEMQEIVERRGVSS 170

[Close]

BLAST of Carg15558 vs. TAIR 10
Match: AT3G27050.1 (unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 2.5e-27
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 12  MLSRDQLFHLFNRFSVIVSLSDSR---------------------------------FGI 71
           ML+++Q+ +LF+RF  + S SD +                                 FGI
Sbjct: 10  MLTKEQMVYLFDRFDYLTSQSDVKKRISDAVDDKQEAVAVTTAIQEEIFLEMGIDPGFGI 69

Query: 72  SCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLHKMQLEMLK 131
            CLGK+NS YEND ELM+ FYKF+A EEMAC+EAEL    F +KM    QL + QLEMLK
Sbjct: 70  GCLGKLNSAYENDKELMIGFYKFLAKEEMACEEAELGQDGFEQKMKALQQLQEQQLEMLK 129

Query: 132 HMRTLHSDDQSAILDKLHEQLESAEFDSSASIMSLEEIQE 139
           +MR    DDQSAIL KL +QLE+A F+  AS++S EE++E
Sbjct: 130 YMRKFSLDDQSAILQKLQKQLENAGFEPEASLLSGEEMEE 169

The following BLAST results are available for this feature:

BLAST of Carg15558 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022661.1	9.7e-74	100.00	hypothetical protein SDJN02_16395 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529832.1	5.2e-67	80.54	uncharacterized protein LOC111792558 [Cucurbita pepo subsp. pepo]	[more]
XP_022928187.1	4.4e-66	80.00	uncharacterized protein LOC111435086 [Cucurbita moschata]	[more]
KAG6588896.1	3.7e-65	79.46	hypothetical protein SDJN03_17461, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022989727.1	1.8e-64	79.44	uncharacterized protein LOC111486726 [Cucurbita maxima]	[more]

BLAST of Carg15558 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ73	2.1e-66	80.00	uncharacterized protein LOC111435086 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]
A0A6J1JGM4	8.9e-65	79.44	uncharacterized protein LOC111486726 OS=Cucurbita maxima OX=3661 GN=LOC111486726...	[more]
A0A5D3C4L8	1.0e-44	62.50	Plant/MOJ10-14 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BNJ5	3.0e-44	61.58	uncharacterized protein LOC103491795 OS=Cucumis melo OX=3656 GN=LOC103491795 PE=...	[more]
A0A6J1DTQ6	6.6e-44	61.76	uncharacterized protein LOC111023401 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Carg15558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27050.1	2.5e-27	45.63	unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36763	EXPRESSED PROTEIN	coord: 33..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15558-RA	Carg15558-RA	mRNA