Carg15555 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15555
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	squamosa promoter-binding-like protein 13A
Location	Carg_Chr11: 10804091 .. 10805371 (+)
RNA-Seq Expression	Carg15555
Synteny	Carg15555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGGTAAACATTAACAATAACAAGAACAATAACAAGAACAACAACAAGAACAACAAAAAAATGATGGGTTTCGTTTGTTTTGCTGTAATTTTGCCTCAAAATGTATGGTTTCTTGTTTTGGTTTCTTGTGGAGTCTAAAAGTATTGTAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACACAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTTATCTATCCCTCCTCAAATCCATAGAAATTTCTTATGATTCTGTTCTTGTTCTGTTTGTAAAATTGGGTTATCCTCCTCAAATCCATAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTATGAGAAATGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAG

mRNA sequence

ATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACACAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTATGAGAAATGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAG

Coding sequence (CDS)

ATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACACAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTATGAGAAATGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAG

Protein sequence

MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLHASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE

Homology

[Close]

BLAST of Carg15555 vs. NCBI nr
Match: KAG7022658.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 698.4 bits (1801), Expect = 3.2e-197
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of Carg15555 vs. NCBI nr
Match: XP_023531790.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_023531791.1 squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 692.2 bits (1785), Expect = 2.3e-195
Identity = 343/347 (98.85%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEE ILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEPILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMV+GEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVKGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WPMR EENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of Carg15555 vs. NCBI nr
Match: XP_022989683.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima])

HSP 1 Score: 688.3 bits (1775), Expect = 3.3e-194
Identity = 341/347 (98.27%), Postives = 343/347 (98.85%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRK SGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQES TSHGSSKRTRLLH
Sbjct: 1   MDWGWRKISGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESYTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WPMR EENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPD I
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDTI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSP+DSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPDDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of Carg15555 vs. NCBI nr
Match: XP_022928509.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 687.6 bits (1773), Expect = 5.7e-194
Identity = 344/347 (99.14%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP R EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 346

[Close]

BLAST of Carg15555 vs. NCBI nr
Match: KAG6588893.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.2 bits (1393), Expect = 6.6e-150
Identity = 284/347 (81.84%), Postives = 284/347 (81.84%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCK                      
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCK---------------------- 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
                                                    GKHMVSSQFCFNQQLPDAI
Sbjct: 181 -----------------------------------------GKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 284

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 284

[Close]

BLAST of Carg15555 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 130/364 (35.71%), Postives = 171/364 (46.98%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTF-QENKQNPTSFSDSIGSNNEE------------------------ 60
           MDW ++  SG    F QE   +P   S S G +++                         
Sbjct: 1   MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDT 60

Query: 61  EQILKGSSQESS-------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSNCKEYHRRH 120
           EQ++  S  + S       +   SSKRTR      NQ   CLVDGCDSD SNC+EYH+RH
Sbjct: 61  EQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRH 120

Query: 121 RVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL 180
           +VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +
Sbjct: 121 KVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Query: 181 FISSRDFLSNCKGPIVLQFSDQQVHVP------DELGRSLWPMRNEENSSLIPSNSSGFF 240
                +F +  +G  +L+FS      P         G SL  +    N S    + S   
Sbjct: 181 G-RPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVV 240

Query: 241 SFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPED 300
              G    +   + P + S      ++ QF F Q+      + S   +       +   D
Sbjct: 241 ---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSRTASLCERMTSCIHD 300

Query: 301 SGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAV 325
           S CAL LLSS        + +  L+Q  LSL   +QE  E  F     F  +    D +V
Sbjct: 301 SDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGSGLFENASAVSDGSV 345

[Close]

BLAST of Carg15555 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 130/364 (35.71%), Postives = 171/364 (46.98%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTF-QENKQNPTSFSDSIGSNNEE------------------------ 60
           MDW ++  SG    F QE   +P   S S G +++                         
Sbjct: 1   MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDT 60

Query: 61  EQILKGSSQESS-------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSNCKEYHRRH 120
           EQ++  S  + S       +   SSKRTR      NQ   CLVDGCDSD SNC+EYH+RH
Sbjct: 61  EQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRH 120

Query: 121 RVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL 180
           +VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +
Sbjct: 121 KVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Query: 181 FISSRDFLSNCKGPIVLQFSDQQVHVP------DELGRSLWPMRNEENSSLIPSNSSGFF 240
                +F +  +G  +L+FS      P         G SL  +    N S    + S   
Sbjct: 181 G-RPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVV 240

Query: 241 SFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPED 300
              G    +   + P + S      ++ QF F Q+      + S   +       +   D
Sbjct: 241 ---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSRTASLCERMTSCIHD 300

Query: 301 SGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAV 325
           S CAL LLSS        + +  L+Q  LSL   +QE  E  F     F  +    D +V
Sbjct: 301 SDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGSGLFENASAVSDGSV 345

[Close]

BLAST of Carg15555 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 9.5e-35
Identity = 100/224 (44.64%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 65  QTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVK 124
           + C VDGC SDLS C++YHRRH+VC+ H+KTPVV+V G+E+RFCQQCSRFH+L EFD+ K
Sbjct: 91  EACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGK 150

Query: 125 RSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFS--DQQVHVPDELGRSLWP 184
           +SCRKRLDGHNRRRRKPQ ++L  + R FL   +     QFS   Q   + D+   +L  
Sbjct: 151 KSCRKRLDGHNRRRRKPQHDAL--NPRSFLPYHQAN---QFSVYPQTFPIADQNADAL-- 210

Query: 185 MRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQP-KNGSKQGKHMVSSQFCFNQQLPDAIS 244
           MR  +       + SG F     + KQ PF+Q   +G    +H +   F   +   D  +
Sbjct: 211 MRPLDRHPPFSISFSGTFR----EPKQFPFMQDGGSGLGAARHDLLRPFSSPE---DGAN 270

Query: 245 QVSEGDSQKTVPPNNSPEDSGCALYLLSS--HPVQALPEAGLSS 284
             +   +   VP    PE   CAL LLSS  HP    P AG+SS
Sbjct: 271 ITTTRSACNGVPHGLDPE---CALSLLSSSLHP---SPAAGISS 294

[Close]

BLAST of Carg15555 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-32
Identity = 67/104 (64.42%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 63  QNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDE 122
           Q  +C VDGC +DLS  ++YHRRH+VC+ HSKTPVV+V G E RFCQQCSRFH LGEFDE
Sbjct: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170

Query: 123 VKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFS 167
            KRSCRKRLDGHNRRRRKPQ +S+  SS  F+++ +G     F+
Sbjct: 171 AKRSCRKRLDGHNRRRRKPQADSM--SSGSFMTSQQGTRFASFT 212

[Close]

BLAST of Carg15555 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 69/117 (58.97%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 46  SSTSHGSSKRTRLLHASQNQ---TCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRG 105
           ++ S   +KR R   A+  Q   +C VDGC  DLS C++YHRRH+VC+ HSKTP+V+V G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 106 EEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKG 160
            E RFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQP+ +  +S  +L++ +G
Sbjct: 154 REMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQG 208

[Close]

BLAST of Carg15555 vs. ExPASy TrEMBL
Match: A0A6J1JR21 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111486693 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.6e-194
Identity = 341/347 (98.27%), Postives = 343/347 (98.85%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRK SGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQES TSHGSSKRTRLLH
Sbjct: 1   MDWGWRKISGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESYTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WPMR EENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPD I
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDTI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSP+DSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPDDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of Carg15555 vs. ExPASy TrEMBL
Match: A0A6J1EL17 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111435296 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 2.7e-194
Identity = 344/347 (99.14%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP R EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 348
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 346

[Close]

BLAST of Carg15555 vs. ExPASy TrEMBL
Match: A0A1S3BNK6 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103491800 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.5e-139
Identity = 273/359 (76.04%), Postives = 297/359 (82.73%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQN-PTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLL 60
           MDW W KFSGE   F ENKQN P+SFSDSIGSN       KGSSQESS+SHGSSKRTRLL
Sbjct: 1   MDWVWGKFSGE-PNFPENKQNPPSSFSDSIGSN-------KGSSQESSSSHGSSKRTRLL 60

Query: 61  HASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120
           H +QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGE
Sbjct: 61  HGNQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120

Query: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGR 180
           FDEVKRSCRKRLDGHNRRRRKPQPESLF+SSRDFLSNCKGPIVLQFSDQQ+ HV DE+GR
Sbjct: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGR 180

Query: 181 SLWPMR--NEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQL 240
           SLWP+R   E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K MVSSQ  FNQQL
Sbjct: 181 SLWPVRTEGEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQL 240

Query: 241 PDAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQ 300
           PD ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT 
Sbjct: 241 PDVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT- 300

Query: 301 EETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 348
            ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 HETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Carg15555 vs. ExPASy TrEMBL
Match: A0A0A0L895 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 9.6e-139
Identity = 271/359 (75.49%), Postives = 298/359 (83.01%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTS-FSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLL 60
           MDWGW KFSGE + F ENKQNP S FSDSIGSN       KGSSQESS+SHGSSKRTRLL
Sbjct: 1   MDWGWGKFSGEPI-FPENKQNPPSTFSDSIGSN-------KGSSQESSSSHGSSKRTRLL 60

Query: 61  HASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120
           HA+QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGE
Sbjct: 61  HANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120

Query: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGR 180
           FDEVKRSCRKRLDGHNRRRRKPQPESLF+SS DFLSNCKGPIVLQFSDQQ+ HV +E+GR
Sbjct: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGR 180

Query: 181 SLWPMR--NEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQL 240
           SLWP+R   E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K +VSSQ  FNQQL
Sbjct: 181 SLWPVRTEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQL 240

Query: 241 PDAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQ 300
           P+ ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT 
Sbjct: 241 PNVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT- 300

Query: 301 EETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 348
            ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 HETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of Carg15555 vs. ExPASy TrEMBL
Match: A0A5D3C4M7 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001560 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.6e-138
Identity = 272/359 (75.77%), Postives = 296/359 (82.45%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQN-PTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLL 60
           MDW W KFSGE   F ENKQN P+SFSDSIGSN       K SSQESS+SHGSSKRTRLL
Sbjct: 1   MDWVWGKFSGE-PNFPENKQNPPSSFSDSIGSN-------KDSSQESSSSHGSSKRTRLL 60

Query: 61  HASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120
           H +QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGE
Sbjct: 61  HGNQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGE 120

Query: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGR 180
           FDEVKRSCRKRLDGHNRRRRKPQPESLF+SSRDFLSNCKGPIVLQFSDQQ+ HV DE+GR
Sbjct: 121 FDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGR 180

Query: 181 SLWPMR--NEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQL 240
           SLWP+R   E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K MVSSQ  FNQQL
Sbjct: 181 SLWPVRTEGEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQL 240

Query: 241 PDAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQ 300
           PD ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT 
Sbjct: 241 PDVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT- 300

Query: 301 EETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 348
            ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 HETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Carg15555 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 130/364 (35.71%), Postives = 171/364 (46.98%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTF-QENKQNPTSFSDSIGSNNEE------------------------ 60
           MDW ++  SG    F QE   +P   S S G +++                         
Sbjct: 1   MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDT 60

Query: 61  EQILKGSSQESS-------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSNCKEYHRRH 120
           EQ++  S  + S       +   SSKRTR      NQ   CLVDGCDSD SNC+EYH+RH
Sbjct: 61  EQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRH 120

Query: 121 RVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL 180
           +VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +
Sbjct: 121 KVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Query: 181 FISSRDFLSNCKGPIVLQFSDQQVHVP------DELGRSLWPMRNEENSSLIPSNSSGFF 240
                +F +  +G  +L+FS      P         G SL  +    N S    + S   
Sbjct: 181 G-RPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVV 240

Query: 241 SFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPED 300
              G    +   + P + S      ++ QF F Q+      + S   +       +   D
Sbjct: 241 ---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSRTASLCERMTSCIHD 300

Query: 301 SGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAV 325
           S CAL LLSS        + +  L+Q  LSL   +QE  E  F     F  +    D +V
Sbjct: 301 SDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGSGLFENASAVSDGSV 345

[Close]

BLAST of Carg15555 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 130/364 (35.71%), Postives = 171/364 (46.98%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTF-QENKQNPTSFSDSIGSNNEE------------------------ 60
           MDW ++  SG    F QE   +P   S S G +++                         
Sbjct: 1   MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDT 60

Query: 61  EQILKGSSQESS-------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSNCKEYHRRH 120
           EQ++  S  + S       +   SSKRTR      NQ   CLVDGCDSD SNC+EYH+RH
Sbjct: 61  EQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRH 120

Query: 121 RVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL 180
           +VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +
Sbjct: 121 KVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Query: 181 FISSRDFLSNCKGPIVLQFSDQQVHVP------DELGRSLWPMRNEENSSLIPSNSSGFF 240
                +F +  +G  +L+FS      P         G SL  +    N S    + S   
Sbjct: 181 G-RPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVV 240

Query: 241 SFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPED 300
              G    +   + P + S      ++ QF F Q+      + S   +       +   D
Sbjct: 241 ---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSRTASLCERMTSCIHD 300

Query: 301 SGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAV 325
           S CAL LLSS        + +  L+Q  LSL   +QE  E  F     F  +    D +V
Sbjct: 301 SDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGSGLFENASAVSDGSV 345

[Close]

BLAST of Carg15555 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 130/364 (35.71%), Postives = 171/364 (46.98%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTF-QENKQNPTSFSDSIGSNNEE------------------------ 60
           MDW ++  SG    F QE   +P   S S G +++                         
Sbjct: 1   MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDT 60

Query: 61  EQILKGSSQESS-------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSNCKEYHRRH 120
           EQ++  S  + S       +   SSKRTR      NQ   CLVDGCDSD SNC+EYH+RH
Sbjct: 61  EQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRH 120

Query: 121 RVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL 180
           +VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +
Sbjct: 121 KVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Query: 181 FISSRDFLSNCKGPIVLQFSDQQVHVP------DELGRSLWPMRNEENSSLIPSNSSGFF 240
                +F +  +G  +L+FS      P         G SL  +    N S    + S   
Sbjct: 181 G-RPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVV 240

Query: 241 SFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPED 300
              G    +   + P + S      ++ QF F Q+      + S   +       +   D
Sbjct: 241 ---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSRTASLCERMTSCIHD 300

Query: 301 SGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAV 325
           S CAL LLSS        + +  L+Q  LSL   +QE  E  F     F  +    D +V
Sbjct: 301 SDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGSGLFENASAVSDGSV 345

[Close]

BLAST of Carg15555 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 122.5 bits (306), Expect = 6.8e-28
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 41  GSSQESSTSHG---SSKRTRLLH-ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTP 100
           G+  + ++S G    SK++R  +  SQN  C V GC  DLS+ K+YH+RHRVC+ HSKT 
Sbjct: 94  GNDDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTS 153

Query: 101 VVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKP 142
           VV+V G E+RFCQQCSRFH L EFD+ KRSCR+RL GHN RRRKP
Sbjct: 154 VVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKP 198

[Close]

BLAST of Carg15555 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 53/76 (69.74%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 67  CLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRS 126
           C +DGC+ DLS+ K+YHR+HRVC+ HSK P V+V G E+RFCQQCSRFH++ EFDE KRS
Sbjct: 176 CQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRS 235

Query: 127 CRKRLDGHNRRRRKPQ 143
           CRKRL  HN RRRKPQ
Sbjct: 236 CRKRLSHHNARRRKPQ 251

The following BLAST results are available for this feature:

BLAST of Carg15555 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022658.1	3.2e-197	100.00	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]
XP_023531790.1	2.3e-195	98.85	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022989683.1	3.3e-194	98.27	squamosa promoter-binding-like protein 13A [Cucurbita maxima]	[more]
XP_022928509.1	5.7e-194	99.14	squamosa promoter-binding-like protein 13A [Cucurbita moschata]	[more]
KAG6588893.1	6.6e-150	81.84	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Carg15555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	4.6e-37	35.71	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	4.6e-37	35.71	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q2R3Y1	9.5e-35	44.64	Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni...	[more]
Q0J0K1	1.2e-32	64.42	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q6YZE8	1.5e-32	58.97	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Carg15555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JR21	1.6e-194	98.27	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EL17	2.7e-194	99.14	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BNK6	2.5e-139	76.04	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034918...	[more]
A0A0A0L895	9.6e-139	75.49	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE...	[more]
A0A5D3C4M7	1.6e-138	75.77	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Carg15555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.2e-38	35.71	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.2e-38	35.71	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.2e-38	35.71	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G69170.1	6.8e-28	59.05	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G27370.1	1.2e-27	69.74	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 67..140 e-value: 3.1E-30 score: 104.3
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 64..141 score: 31.547325
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 59..128 e-value: 1.9E-31 score: 110.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 66..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..57
None	No IPR available	PANTHER	PTHR31251:SF93	TRANSCRIPTION FACTOR SBP FAMILY-RELATED	coord: 36..323
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 36..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15555-RA	Carg15555-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding