Carg15546 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15546
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L7a
Location	Carg_Chr11: 10739020 .. 10741681 (+)
RNA-Seq Expression	Carg15546
Synteny	Carg15546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTCTTATTTTGCCCTAGCCGTCTGCTCTCCCTCTCTGCTTCAGTTTGCCGCCGCTTATTTATATTCCATCCTTCTTCTCAATCTCCCTTTCACCAGGCTCGGATAAAATGGTATGAATCTCCCCACTCTCTTCTCTATTTTGATTCTGTTTATCAGTTTAGTTTGCGTTTTCTGGAGCTTTCAGATTCAATCTTTTGTTTTCAGATGCTATAATAGAATCAGTCCATGAATGTGTTTTTGTTTGGATGACTGAGACCGAAAACTATGTATCATGGTTGCGTTGCTGTTATGTTTTCTGCGATTTTAAGTTTTGAAATTTCTAGATGCATTCTTTTTATTAGGTTTTGAGAGAAGTTTTCCTCTCGATCGTCGGACAATATGGTGTGTCATTTGATGCTTTTGAAATCACGAGGTTTTGATCGCTGAATCTGTTTGGCTTATTTTGATATGAAGCAGTTTCTGTCGGAGGTTGATTTTGATGTGTTTTTGGCTTCTTTTGAAAAATGCTTGCTAGGTAGATTTACTGAGTTGAGACTTAAGAGACATTCACTTTTTGGATTTAGCCACTTAGTGTTCTTTCATGGACACTCCTGGTTTTCAGGCCTTTACTACTTGTTAGCATATTGATCATCGTTTTATTATCAAATACAATTCATGGCAGTTACACTTGTAACATTAGCACTAATAGGCTTGAAAGTAGTCCAGTTGGTAAAAGCGTCAGTTGCCTTACCTCAAGGTTATTGATTGAATTCACATCCCTTGTTTGAATTGTAGTATCCTGAAAAAACACTTATGTAATCAAATTATGATAGTTGTACCTTGCAACAAAATATGAAGAAAATGGTTTTGTACAAAATTGAAGTGTTTTTATGATTTCTTTTAATACTTTCAAGACTCTAGGAGAGATAGATGTCTACACATTTTAAGATGTAAGATAAAATTCCTTCCCCTAACAATCTTTTTGTCATTATACTTGAATCCCTCTTTGTGTATTATAGTTGATTTGTTCTCTTTATGATTTCTTAGATGTTTACATCTTTGCCTGGAATGAAATTTGCTGACATCATTTTATTGTACTTTTAAAGGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGTAAGTGATTCTTTTCCTTGATGAATGTTTTCTTTTTTATTATTGTTCAGTCTTTTTGCTGTTTTTTTAATACAGTGTTGTGTGTTGTTAACAGGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCGCCAAAGAGGGATTTGACAAGGTTTGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTTAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAAACCCTTGACAAAAATCTTGGTAAACTATTAGATTTTAGTTGTGATTGTTGTCTTGTTCTTTTAAGGTATGCCTTTTAGCCATATTGGATTAATGAGGTTCTAATGCCTTCAATGATTTTTACTTGTTAATTATATGTTTCAGTTTGGTTTCATTGAGACTGTTTCTTGTTTGACCTTGCAAATATATTTTCAAAGTTGATTACTGCTGATCATAAACTTCAGTCTCTGAATCTAGATTGCTGATTGATCCGTGCCTTCATTTTTACTGATGGGTTTTTATTACTTTTGCTGCTCACTTTGGTCATTTGGAAAAAATGTAATAGAAAATTCCTTATCTGATTCCAACAATTGTGTCTGTTCAACATTTATTTTGTTTTGGTTAGATTATATGTATACTGTCTCCTTTACCTCTGTTCTTTGTATTGATATCAAGTTCAATATTTAATGTGTATACAGCCACGAACCTGTTCAAGATGCTTTTGAAGTACAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATATGGTCTCAACCATGTCACCTATCTCATTGAGCAGGTTTTATTTTGTTCGGTCGTCGTACATTTGAATATTTTGGTTATCCAACTGTTATACTGCCTGGAATCATGTATACTCATAATGTGAACTTCCTTTCCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTTCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGGTAATTACGACCGTTTATTTGCGATACTTTCCACTCTTTTGAATCCACAAGTGCCAATGCCTTTAATTTTTCCTTTACAACAGATTGTCCATCAAAAGACTGCATCTGTATTGTGCTTGACAACCGTGAAGAACGAAGATAAATTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGTGATTTACATAATCGTTTTCGTCGCTTCTTATCTAACATTGCGATTTGATTGGCGTAGTTATAATATTGTGTCGGTTGTTTGTTTTAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTGGCCAAAGAAGCTGCTCAAAGAATGTCTTAG

mRNA sequence

TTGTTCTTATTTTGCCCTAGCCGTCTGCTCTCCCTCTCTGCTTCAGTTTGCCGCCGCTTATTTATATTCCATCCTTCTTCTCAATCTCCCTTTCACCAGGCTCGGATAAAATGGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCGCCAAAGAGGGATTTGACAAGGTTTGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTTAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAAACCCTTGACAAAAATCTTGCCACGAACCTGTTCAAGATGCTTTTGAAGTACAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATATGGTCTCAACCATGTCACCTATCTCATTGAGCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTTCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGATTGTCCATCAAAAGACTGCATCTGTATTGTGCTTGACAACCGTGAAGAACGAAGATAAATTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTGGCCAAAGAAGCTGCTCAAAGAATGTCTTAG

Coding sequence (CDS)

ATGGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCGCCAAAGAGGGATTTGACAAGGTTTGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTTAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAAACCCTTGACAAAAATCTTGCCACGAACCTGTTCAAGATGCTTTTGAAGTACAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATATGGTCTCAACCATGTCACCTATCTCATTGAGCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTTCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGATTGTCCATCAAAAGACTGCATCTGTATTGTGCTTGACAACCGTGAAGAACGAAGATAAATTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTGGCCAAAGAAGCTGCTCAAAGAATGTCTTAG

Protein sequence

MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS

Homology

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BLAST of Carg15546 vs. NCBI nr
Match: XP_022928506.1 (60S ribosomal protein L7a-1 [Cucurbita moschata] >XP_022989710.1 60S ribosomal protein L7a-1 [Cucurbita maxima] >XP_023531601.1 60S ribosomal protein L7a-1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531602.1 60S ribosomal protein L7a-1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6588885.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022649.1 60S ribosomal protein L7a-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494.6 bits (1272), Expect = 5.2e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. NCBI nr
Match: XP_022983551.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima])

HSP 1 Score: 489.2 bits (1258), Expect = 2.2e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLVKRAQEEAEGKAHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. NCBI nr
Match: XP_022928907.1 (60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_022970187.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_023551211.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo] >KAG7017115.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 2.9e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. NCBI nr
Match: XP_022934368.1 (60S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo] >KAG6581109.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017841.1 60S ribosomal protein L7a-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 2.9e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKAHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. NCBI nr
Match: KAG6579663.1 (60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 487.6 bits (1254), Expect = 6.4e-134
Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKAL+KKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALSKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 441.4 bits (1134), Expect = 6.9e-123
Identity = 221/257 (85.99%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKK V  A  KK AEKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 1   MAPKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKER++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of Carg15546 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-121
Identity = 219/257 (85.21%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKK V K  +KKK EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+ +AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKER++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of Carg15546 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 2.4e-120
Identity = 225/259 (86.87%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MAPKKAVGKA--LAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRK 60
           MAPK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR+
Sbjct: 1   MAPKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQ 60

Query: 61  KRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKP 120
           +RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERL+KRAQ EAEGK 
Sbjct: 61  RRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKT 120

Query: 121 HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGK 180
            +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK
Sbjct: 121 VEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK 180

Query: 181 ARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQ 240
           ARLG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQ
Sbjct: 181 ARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQ 240

Query: 241 AKTKAKERLLAKEAAQRMS 258
           AKTKA+E+LLAKEAAQRM+
Sbjct: 241 AKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Carg15546 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 2.4e-120
Identity = 225/259 (86.87%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MAPKKAVGKA--LAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRK 60
           MAPK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR+
Sbjct: 1   MAPKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQ 60

Query: 61  KRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKP 120
           +RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERL+KRAQ EAEGK 
Sbjct: 61  RRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKT 120

Query: 121 HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGK 180
            +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK
Sbjct: 121 VEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK 180

Query: 181 ARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQ 240
           ARLG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQ
Sbjct: 181 ARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQ 240

Query: 241 AKTKAKERLLAKEAAQRMS 258
           AKTKA+E+LLAKEAAQRM+
Sbjct: 241 AKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Carg15546 vs. ExPASy Swiss-Prot
Match: Q2TBQ5 (60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3)

HSP 1 Score: 286.2 bits (731), Expect = 3.7e-76
Identity = 148/261 (56.70%), Postives = 198/261 (75.86%), Query Frame = 0


Query: 4   KKAVGKALA-------KKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQ 63
           KKA GK +A       K++A+KVVNPLFEKRPK FGIG  + PKRDLTRFVKWP+ +++Q
Sbjct: 5   KKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQ 64

Query: 64  RKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEG 123
           R++ IL +RLKVPPA+NQFT+ LD+  AT L K+  KYRPE K +K++RL+ RA+++A G
Sbjct: 65  RQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAG 124

Query: 124 KPH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 183
           K     K+P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+
Sbjct: 125 KGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCII 184

Query: 184 KGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGS 243
           KGKARLG +VH+KT + +  T V +EDK   ++++EAI+ N+ND+YDE R+ WGG ++G 
Sbjct: 185 KGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGP 244

Query: 244 KSQAKTKAKERLLAKEAAQRM 257
           KS A+    E+  AKE A ++
Sbjct: 245 KSVARIAKLEKAKAKELATKL 265

[Close]

BLAST of Carg15546 vs. ExPASy TrEMBL
Match: A0A6J1JN50 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111486710 PE=3 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.5e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. ExPASy TrEMBL
Match: A0A6J1EKG8 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435292 PE=3 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.5e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. ExPASy TrEMBL
Match: A0A6J1J2M5 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111482120 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLVKRAQEEAEGKAHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. ExPASy TrEMBL
Match: A0A6J1HZX8 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. ExPASy TrEMBL
Match: A0A6J1EL96 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKERLLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg15546 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 441.4 bits (1134), Expect = 4.9e-124
Identity = 221/257 (85.99%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKK V  A  KK AEKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 1   MAPKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKER++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of Carg15546 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 437.2 bits (1123), Expect = 9.2e-123
Identity = 219/257 (85.21%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 1   MAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60
           MAPKK V K  +KKK EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+ +AQ EAEGKP +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKERLLAKEAAQRMS 258
           TKAKER++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of Carg15546 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 127 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 186
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 187 QKTASVLCLTTVKNEDKLE 206
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Carg15546 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 127 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 186
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 187 QKTASVLCLTTVKNEDKLE 206
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Carg15546 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 127 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 186
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 187 QKTASVLCLTTVKNEDKLE 206
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:

BLAST of Carg15546 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928506.1	5.2e-136	100.00	60S ribosomal protein L7a-1 [Cucurbita moschata] >XP_022989710.1 60S ribosomal p...	[more]
XP_022983551.1	2.2e-134	98.83	60S ribosomal protein L7a-2-like [Cucurbita maxima]	[more]
XP_022928907.1	2.9e-134	98.83	60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ...	[more]
XP_022934368.1	2.9e-134	98.83	60S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal p...	[more]
KAG6579663.1	6.4e-134	98.44	60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg15546 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49692	6.9e-123	85.99	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
Q9LZH9	1.3e-121	85.21	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P35685	2.4e-120	86.87	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	2.4e-120	86.87	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
Q2TBQ5	3.7e-76	56.70	60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3	[more]

BLAST of Carg15546 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN50	2.5e-136	100.00	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111486710 PE=3 SV=1	[more]
A0A6J1EKG8	2.5e-136	100.00	60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435292 PE=3 SV=...	[more]
A0A6J1J2M5	1.1e-134	98.83	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111482120 PE=3 SV=1	[more]
A0A6J1HZX8	1.4e-134	98.83	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1	[more]
A0A6J1EL96	1.4e-134	98.83	60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=...	[more]

BLAST of Carg15546 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47610.1	4.9e-124	85.99	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G62870.1	9.2e-123	85.21	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	2.3e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	2.3e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	2.3e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 162..172 score: 64.46 coord: 172..186 score: 56.36 coord: 146..159 score: 71.43 coord: 127..141 score: 45.76
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 45..62 score: 60.1 coord: 28..45 score: 71.21 coord: 123..143 score: 62.77 coord: 184..208 score: 48.36 coord: 216..236 score: 68.4 coord: 89..102 score: 62.34 coord: 65..84 score: 74.09
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 114..204 e-value: 1.6E-25 score: 88.7
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 49..232 e-value: 1.1E-80 score: 271.6
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 87..228
None	No IPR available	PANTHER	PTHR23105:SF168	BNAA03G47020D PROTEIN	coord: 2..255
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..255
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 165..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15546-RA	Carg15546-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding