Carg15483 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15483
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	vesicle transport protein GOT1-like
Location	Carg_Chr06: 10010380 .. 10012095 (-)
RNA-Seq Expression	Carg15483
Synteny	Carg15483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGTTCTTCTCTCTTTCTCCTTTCATTACTCTTAACTCTTCGTTATGCATTCGTATTCCTTTAATTCCGCTGTTTTCCTTGCATAACAACAATAATCGCCTGCAATTTGCTGCTTTCTCTTATGCTCATACTGATTTAATTGATGTAAATATCTTTCTCTTTGTTATGTTCCAGGTTTTTATTAGATTTGTTCTCGAAACCTTGTTATTTGTTGTTCTGGTTGATTGATTGATTGATGGAACTTCATCTGGATCTTGTATGACTTTTCTCAATTTTTGCTGCGCTAACCCTAGGATTTTTGTTGATTGAAGTTGCTTTGCTGATCTGATCGGCCTGTTTCTTCTTGATTTCGTTTTGAAATTATGCAGTGAAGGCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAGTAAGTTTACTATTTCTTGCCGATGGACTATCCTGTGAAGTGGATCGGTTTCTCCTTTCAAGTAATTAGCTATTGGTTTAGGCCACTTGACTATTACAGTATTATCGTTTTATTCTGTTTGTAGTTTGGTAATTAGAATGGTTGGAATGAGTGTTCTGTTGGTCATAGGTTTGAATATGGTGAATCCGGCGTTGGCAATGGCCATGCGATGGAGTTTTTGATCACTTAATCTAGTATTTGCTTCTCGTCTGTATTTGCTTTCTTGGAACCGAAAATGTGTTGAAATGGAATTTTTGGTCTTTAACTAAGTTTAGTGGCTGGACACCATTTATAGAAATTTGTATCCTATTAAGTCATAGATTGCTTTCACACATATTCTTAATGCTACGTATTTAGTTGATTTTTGCGTGTCTACTTTGGTAATATTCACGCATATAGGAGTGAAGCTGTGTGGTCTTTTCTAATTGTTTTGTTTCTTATATGGAATTGTTAATTTGTAATGGCATTAACGAGGAAATTTCCAAATGAGCAGAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATGTAAGTGTAAAATTTATATTTTTGTCGACCCAAGTAAAAAGATTTATAATGCTTTTTTCATTTCAATGTAAACTCTTAACACTTCCTCTTTTCTGATTTGCTGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTCAGTGCCAGAGATAGATACTCTTTTCCTCATACTCGTCCGTTATCGTGCATGCATTTTTTTTTCATGACAATATGCTATTCATTAATTGTGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGGTTTGTTGGAACCATGTGGCTACAATTTCAATTTGTCTGTATATGTCTTTCTAATATTGGGCTGTGCTGAATGTTGATAAATTATACTGTGCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

mRNA sequence

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Coding sequence (CDS)

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Protein sequence

MHLASGTSLNCSSLRVEFSHFCLHSQGGEFQLSVDMVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF

Homology

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BLAST of Carg15483 vs. NCBI nr
Match: KAG7029082.1 (Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MHLASGTSLNCSSLRVEFSHFCLHSQGGEFQLSVDMVSFEMNDRKKIGLGLTGFGIFFSF 60
           MHLASGTSLNCSSLRVEFSHFCLHSQGGEFQLSVDMVSFEMNDRKKIGLGLTGFGIFFSF
Sbjct: 1   MHLASGTSLNCSSLRVEFSHFCLHSQGGEFQLSVDMVSFEMNDRKKIGLGLTGFGIFFSF 60

Query: 61  LGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWP 120
           LGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWP
Sbjct: 61  LGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWP 120

Query: 121 IIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF 170
           IIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF
Sbjct: 121 IIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF 169

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BLAST of Carg15483 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >KAG6597641.1 Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 5.1e-63
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 6.6e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. NCBI nr
Match: KAA0044616.1 (vesicle transport protein GOT1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 6.6e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-53
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 156 FQQPYVRSV 165
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

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BLAST of Carg15483 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-30
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF +R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

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BLAST of Carg15483 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Carg15483 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Carg15483 vs. ExPASy Swiss-Prot
Match: Q20263 (Probable Golgi transport protein 1 OS=Caenorhabditis elegans OX=6239 GN=eas-1 PE=3 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M++FE++  K+IG+GLT FG FF FLG++ F D  LLA+GN+LF  G+T  IG++ T+ F
Sbjct: 1   MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           F + +  KG+I F  G   V+ G+P+ GMI E +GF+VLF GF P +   L+ IP +  +
Sbjct: 61  FFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTI 120

Query: 156 FQQPYVRSV 165
              P +R V
Sbjct: 121 TYLPGIRQV 129

[Close]

BLAST of Carg15483 vs. ExPASy TrEMBL
Match: A0A6J1I889 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.4e-64
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. ExPASy TrEMBL
Match: A0A6J1F266 (vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC111439110 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.4e-64
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. ExPASy TrEMBL
Match: A0A5A7TR70 (Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003670 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.2e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.2e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. ExPASy TrEMBL
Match: A0A1S3BYQ5 (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGT+SFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. TAIR 10
Match: AT3G49420.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 156 FQQPYVRS 164
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Carg15483 vs. TAIR 10
Match: AT5G01430.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 156 FQQPYVRS 164
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Carg15483 vs. TAIR 10
Match: AT5G01430.2 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 156 FQQPYVRS 164
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Carg15483 vs. TAIR 10
Match: AT3G03180.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-54
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 156 FQQPYVRSV 165
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

[Close]

BLAST of Carg15483 vs. TAIR 10
Match: AT1G05785.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 62/121 (51.24%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 39  FEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMK 98
           +E+ ++KK+GLGL GFG+ F+FLG++ +FD+GLLA+GN+ +  GV L +G +ST + F  
Sbjct: 3   YEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVFTN 62

Query: 99  RQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQ 158
             N +GTI F LG F + + WPIIG+ILE YG +VLF GFW T+  FL +IP +GW+ Q 
Sbjct: 63  VNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWIIQY 122

Query: 159 P 160
           P
Sbjct: 123 P 123

The following BLAST results are available for this feature:

BLAST of Carg15483 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029082.1	1.6e-88	100.00	Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022932598.1	1.7e-63	100.00	vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle...	[more]
XP_038879388.1	5.1e-63	99.22	vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle ...	[more]
XP_004152095.1	6.6e-63	98.44	vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transpo...	[more]
KAA0044616.1	6.6e-63	98.44	vesicle transport protein GOT1B-like [Cucumis melo var. makuwa]	[more]

BLAST of Carg15483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMM1	2.2e-53	75.97	Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1	[more]
Q9CR60	2.0e-30	52.85	Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1	[more]
Q2YDE3	3.4e-30	52.03	Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1	[more]
Q9Y3E0	3.4e-30	52.03	Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1	[more]
Q20263	1.3e-24	44.96	Probable Golgi transport protein 1 OS=Caenorhabditis elegans OX=6239 GN=eas-1 PE...	[more]

BLAST of Carg15483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I889	8.4e-64	100.00	vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 ...	[more]
A0A6J1F266	8.4e-64	100.00	vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143911...	[more]
A0A5A7TR70	3.2e-63	98.44	Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KU00	3.2e-63	98.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1	[more]
A0A1S3BYQ5	4.2e-63	97.66	vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=...	[more]

BLAST of Carg15483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49420.1	1.1e-60	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	1.1e-60	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.2	1.1e-60	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	1.6e-54	75.97	Got1/Sft2-like vescicle transport protein family	[more]
AT1G05785.1	1.7e-32	51.24	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 56..150 e-value: 1.2E-14 score: 54.6
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 36..164
None	No IPR available	PANTHER	PTHR21493:SF248	SUBFAMILY NOT NAMED	coord: 36..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15483-RA	Carg15483-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane