Carg15398 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15398
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription factor bHLH144
Location	Carg_Chr03: 9590505 .. 9593528 (+)
RNA-Seq Expression	Carg15398
Synteny	Carg15398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTTTTTAAATACTCTCTTACCCCTCGATCCCTCTCTCTCTCCCCCTCGATCCCTCTCATCTTCCTGCCAGATCTTTAGCTTGCAGACCAAATCTGGGGACTGATCTACCGAACTCTTACGAAAATCGTCCGATCGTCTTCGTTTTTCTGCCTGATTCAGCTCTGGAATCACGTGGGTGAAATTTTTTGTTTCATATTTTGAGGAAACTTGTTTGTTTTCCGTTTCTTTTAGCTTGCGGTAATGGTGCTAGGGCACGTATACTTTTTTTGGAGTTCGTTTAATTTCTGGATGTGTACTGCGAGAAGTTAATTTTCGAGTGATTTGTACTTTCGGCAGATCGTAGTTCTGCTTTGTTTGTTCTTTCTTTACTGTTATCATTGTTAGTGTCTGGCGTTCTCTTGCGATGGGGATTTTCTAAATTTAACCTTAAATTACTATGCTATCGATTCTGTTCTCGTTGATCTGTCAATTTTTTCTCAGTGTTTTTGGGCTGTTTTGCACTTGATTTTTTCTCGTCTCGTGTATGGATAATGAGGGAATTCGGTAAAATGAACGATTTGATGAACTCTTAGGTTCTGTTCAGGGGAGAACGTTTAAACCAGATTAGCGAGTACCTGTATCTTTTAACTTCTAAAAATGTATACACACGTCGTTTGCTTAACTGGTTTTGTTCACCGGGTGTTCTGTCTAGGGAGTTGTTCATGTTTTTACGTTTGTTAAGTTGTACTGATTGCTTCTCCTTCGTTTGCTTTACCTTTCAGTTTAGGATTGGGTTCGTCTTTATATTAAGTGGAATTGGAGAATAGAATCAAGATGCCGTGGACAGCCTCCTTGGTGAATTACTGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCGTGTCATTCTGTAATTTGATTTGCATTGGTGAGATTTTTGGAACGAATCCAATTATTTTGATTATTACCATAATTGTCTAGACATGTAAGAAATTGTCTTGGAGGGAGAATATTTTTCTTTTTGGTAGGTCACAACAATGATCTTTCACTGGCCTTGTATTCACTTGCCAAGGCTAGGAATTTGTTGGGCTCCGCCAGATTTATCTTTTTGAGGATCGTCCATAGAAAAATACGACTGATCTTGTGTACTTGTTAATATTATTATTGTGCTTATAAATTTTGTGAAGTTTTAAAGTTATTTGCTTATGGCTGTGTGCAGAAGGAAATTAAAACGTTGATTTTGCTGGTCTTACTTTTGCGGCTGTTCCAATATTATATTACTGGTTGGAGGAGTGAGAATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTGAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGTAAACCATAATCTGTAAATTTTACTCTGCGGTGATTGTTTGTTGTTACAGCTCACACATTTGAAGTGTCTGAAATTTCATATTAGTTGTCTCTTTATTCATCCCAAATCACTATCAACTCTAAATCGATTTCTGAAGTATTGATAAAAGGGGAGTTTTTACTTGCAACCATGTTACAGATAATATGGTGTTTAGTTCCAATCTAATATCTTTCGATTGTTTATTAGCTAAACCAAGGTATTATAGTATATTTTTCAAACATTAAGTTTATATATGCATTTTTTCATGTTGTAGTTAAGTTTTTTGCTTTCTCCTCTCATCTTCCTGCCTGCTTTGAGATTATGTTTACTGTATCTCAATAAAGTAACTTTGTTTTGTAGCTGTTGTCGTTCCTTCGGAGTTCTGGATTTGTATGAATTTTATATTTTCAAAAATTGGTTACTGGTACATTTTATTGTATGAACTAACACATTTTGGATTCACTTGACTGTCTGTACTGCTTTCATTGTTGGACTGTTAAAGGGCATCTTTAAGTGCTTTGTTTTGATGCCTTTCAATTTGTTCATTACAGGCCGAGTATTTTCGCCAATTGCTAAAACCTGTCACGTAGGAGAACATTGCAATAAGCATTTGGACATTGGGGAGTTGGGTGGACTGGCCTCCAGTTGTGCTAGAAGTGAAGAAATGAAATATTTCTTTCCTGTCTGTCTTTAATTTGATATAAAGATCTCGCTTAAATTTACATGGCAACATATAGAGTTGCTGTGTAGTCTTCTCATTAGTTAACATCCCATTTTGATTTTCGTAATACAATAGCAAGCTTTCCTGAGAGAGAAGACACGGTAACTTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTACATGGACTTTATGCAGAGTGACCTCAACTGTTACCTCAAAAACGCGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTATGCTTCTGTTTTACCTCCTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTCTGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCGGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCCGCGACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTATCAAATGACAACAGTCACCGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

mRNA sequence

AAAAGTTTTTAAATACTCTCTTACCCCTCGATCCCTCTCTCTCTCCCCCTCGATCCCTCTCATCTTCCTGCCAGATCTTTAGCTTGCAGACCAAATCTGGGGACTGATCTACCGAACTCTTACGAAAATCGTCCGATCGTCTTCGTTTTTCTGCCTGATTCAGCTCTGGAATCACTTTAGGATTGGGTTCGTCTTTATATTAAGTGGAATTGGAGAATAGAATCAAGATGCCGTGGACAGCCTCCTTGGTGAATTACTGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCGTGTCATTCTGTAATTTGATTTGCATTGGAAATTAAAACGTTGATTTTGCTGGTCTTACTTTTGCGGCTGTTCCAATATTATATTACTGGTTGGAGGAGTGAGAATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTGAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAGTGACCTCAACTGTTACCTCAAAAACGCGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTATGCTTCTGTTTTACCTCCTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTCTGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCGGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCCGCGACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTATCAAATGACAACAGTCACCGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

Coding sequence (CDS)

ATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTGAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAGTGACCTCAACTGTTACCTCAAAAACGCGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTATGCTTCTGTTTTACCTCCTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTCTGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCGGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCCGCGACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTATCAAATGACAACAGTCACCGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

Protein sequence

MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Homology

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BLAST of Carg15398 vs. NCBI nr
Match: KAG7034698.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.9 bits (1413), Expect = 2.5e-152
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60
           MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ
Sbjct: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60

Query: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180
           PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS
Sbjct: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180

Query: 181 TARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKL 240
           TARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKL
Sbjct: 181 TARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKL 240

Query: 241 REILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           REILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 REILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Carg15398 vs. NCBI nr
Match: KAA0052558.1 (transcription factor bHLH144 [Cucumis melo var. makuwa] >TYK13268.1 transcription factor bHLH144 [Cucumis melo var. makuwa])

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131
Identity = 251/281 (89.32%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60
           MYIGITGKR+RAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK A  PTA QG DNHMQ
Sbjct: 1   MYIGITGKRSRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60

Query: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180
           PTANMCSKYIQKNF VND H +DREISSPLMEDLDDIDALLSLE+E+HE +DGSED+E+S
Sbjct: 121 PTANMCSKYIQKNFCVNDNHYEDREISSPLMEDLDDIDALLSLENENHEGLDGSEDDEVS 180

Query: 181 TARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRK 240
           TARSHLNYGNQSPDSSSSS YSSKPRKN SFNPVHK SSSG SS  SDMKQLK+KKMVRK
Sbjct: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG-SSCSSDMKQLKLKKMVRK 240

Query: 241 LREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           LREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 LREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Carg15398 vs. NCBI nr
Match: XP_022926036.1 (transcription factor bHLH144-like [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 8.0e-130
Identity = 244/250 (97.60%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSAY SVLPPGRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211
           MEDLDDIDALLSL+DEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of Carg15398 vs. NCBI nr
Match: XP_023544178.1 (transcription factor bHLH144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 3.0e-129
Identity = 243/250 (97.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSA+ SVLPPGRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAFPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211
           MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKN+SF
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNQSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of Carg15398 vs. NCBI nr
Match: XP_022977790.1 (transcription factor bHLH144-like [Cucurbita maxima])

HSP 1 Score: 453.0 bits (1164), Expect = 1.9e-123
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLNCYLKN MLPTANQGGDNHMQIPLSSA+ SVLP GRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211
           MEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Carg15398 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.1e-36
Identity = 107/244 (43.85%), Postives = 151/244 (61.89%), Query Frame = 0


Query: 51  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQI 110
           +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+
Sbjct: 10  SDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQV 69

Query: 111 MFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDDREISSPLMEDLDDIDALLSL 170
           M+HP + +KL + P+ N  +   Q N YV   +    N ++E+SS   ED ++IDALLS 
Sbjct: 70  MYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSA 129

Query: 171 ED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKL 230
           ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    L
Sbjct: 130 DEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNN-SRKQSL 189

Query: 231 SSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVG 281
           S S  SS +    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG
Sbjct: 190 SGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVG 249

[Close]

BLAST of Carg15398 vs. ExPASy TrEMBL
Match: A0A5A7UBJ4 (Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008860 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.4e-132
Identity = 251/281 (89.32%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60
           MYIGITGKR+RAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK A  PTA QG DNHMQ
Sbjct: 1   MYIGITGKRSRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60

Query: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180
           PTANMCSKYIQKNF VND H +DREISSPLMEDLDDIDALLSLE+E+HE +DGSED+E+S
Sbjct: 121 PTANMCSKYIQKNFCVNDNHYEDREISSPLMEDLDDIDALLSLENENHEGLDGSEDDEVS 180

Query: 181 TARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRK 240
           TARSHLNYGNQSPDSSSSS YSSKPRKN SFNPVHK SSSG SS  SDMKQLK+KKMVRK
Sbjct: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG-SSCSSDMKQLKLKKMVRK 240

Query: 241 LREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           LREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 LREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Carg15398 vs. ExPASy TrEMBL
Match: A0A6J1EDR8 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.8e-130
Identity = 244/250 (97.60%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSAY SVLPPGRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211
           MEDLDDIDALLSL+DEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 250

[Close]

BLAST of Carg15398 vs. ExPASy TrEMBL
Match: A0A6J1INB7 (transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.2e-124
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLNCYLKN MLPTANQGGDNHMQIPLSSA+ SVLP GRNNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 211
           MEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SF
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPRKNQSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHKLSSSGRSS +SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Carg15398 vs. ExPASy TrEMBL
Match: A0A0A0KLX4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 219/250 (87.60%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNF VND+H++DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 152 EDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSF 211
           EDLDDIDALLSLE+E+HED+DGSED+E+STARSHLNYGNQSPDSSSSS YSSKPRKN SF
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHK SSSG SS +SD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKSSSSG-SSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Carg15398 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 221/250 (88.40%), Postives = 229/250 (91.60%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEV 91
           M   QSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 152 EDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSF 211
           EDLDDIDALLSLE+E+HE +DGSED+E+STARSHLNYGNQSPDSSSSS YSSKPRKN SF
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 271
           NPVHK SSSG SS  SDMKQLK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKSSSSG-SSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 272 QKLGVGGLEN 281
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Carg15398 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-37
Identity = 107/244 (43.85%), Postives = 151/244 (61.89%), Query Frame = 0


Query: 51  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQI 110
           +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+
Sbjct: 10  SDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQV 69

Query: 111 MFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDDREISSPLMEDLDDIDALLSL 170
           M+HP + +KL + P+ N  +   Q N YV   +    N ++E+SS   ED ++IDALLS 
Sbjct: 70  MYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSA 129

Query: 171 ED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKL 230
           ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    L
Sbjct: 130 DEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNN-SRKQSL 189

Query: 231 SSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVG 281
           S S  SS +    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG
Sbjct: 190 SGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVG 249

[Close]

BLAST of Carg15398 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-37
Identity = 107/244 (43.85%), Postives = 151/244 (61.89%), Query Frame = 0


Query: 51  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQI 110
           +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+
Sbjct: 10  SDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQV 69

Query: 111 MFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDDREISSPLMEDLDDIDALLSL 170
           M+HP + +KL + P+ N  +   Q N YV   +    N ++E+SS   ED ++IDALLS 
Sbjct: 70  MYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSA 129

Query: 171 ED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKL 230
           ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    L
Sbjct: 130 DEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNN-SRKQSL 189

Query: 231 SSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVG 281
           S S  SS +    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG
Sbjct: 190 SGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVG 249

The following BLAST results are available for this feature:

BLAST of Carg15398 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034698.1	2.5e-152	100.00	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0052558.1	1.1e-131	89.32	transcription factor bHLH144 [Cucumis melo var. makuwa] >TYK13268.1 transcriptio...	[more]
XP_022926036.1	8.0e-130	97.60	transcription factor bHLH144-like [Cucurbita moschata]	[more]
XP_023544178.1	3.0e-129	97.20	transcription factor bHLH144 [Cucurbita pepo subsp. pepo]	[more]
XP_022977790.1	1.9e-123	94.40	transcription factor bHLH144-like [Cucurbita maxima]	[more]

BLAST of Carg15398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	9.1e-36	43.85	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of Carg15398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBJ4	5.4e-132	89.32	Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1EDR8	3.8e-130	97.60	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 ...	[more]
A0A6J1INB7	9.2e-124	94.40	transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE...	[more]
A0A0A0KLX4	1.1e-113	87.60	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 S...	[more]
A0A1S3AYV1	1.5e-113	88.40	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]

BLAST of Carg15398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	6.4e-37	43.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	6.4e-37	43.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..231
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 37..278
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 37..278
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 217..266 score: 8.847999
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 232..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15398-RA	Carg15398-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity