Carg15382 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15382
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AWPM-19-like protein
Location	Carg_Chr03: 9517294 .. 9518411 (-)
RNA-Seq Expression	Carg15382
Synteny	Carg15382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAACTCTCAAGTTTAAAGCCATAAACAAAACTCTTTCATCTCAAAACCCTTCTTTCTTCTATACAACCCATTTGAAGATATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTTTGAATCAACTCTGTTTCCTCATCTTTCTGCTGTTCTTCTTTCAACTATGGTGTTGATGTTTCTTTTAGTGGTAATTTTGTGCAAGTGTTTCATTTTCAGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTATGCAAGTTCAAATCTTATTTTGTGAGACCTCATCGGTTAGAGAGGGGAACGAAACACTCCTTATAAGCATGTGAAAACCTCTCCCTAGTAGACACGTTTTAAAACTTTGAGGAAAATCACATCAAAGATTATAACCAGAATGAATATCATTGATGCAGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGGTGAGGAACCCAAAACTTCTCTCTTTAATTTTTCCCTTTTAGAGACTTTGTTTCAGTTCTCCAAAAGTGATCACAAAGTTAGTAGAAACTACGGAGCTAAGGTTGAGTTCCTTTATGTTTTCTTATGCAGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGAACGCTTAGTTAGTGGGGTTTGCTTTCAAATTTTCTTTCCTTTCCATTCTTTATTTTTCTCTACTTCAGCTCTATATGTAAATGGGGAGAAACTCACAGTTGGTGTGCAAAAAAAGAATAAAATTTCAATGACTTTGATG

mRNA sequence

GATGAACTCTCAAGTTTAAAGCCATAAACAAAACTCTTTCATCTCAAAACCCTTCTTTCTTCTATACAACCCATTTGAAGATATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGAACGCTTAGTTAGTGGGGTTTGCTTTCAAATTTTCTTTCCTTTCCATTCTTTATTTTTCTCTACTTCAGCTCTATATGTAAATGGGGAGAAACTCACAGTTGGTGTGCAAAAAAAGAATAAAATTTCAATGACTTTGATG

Coding sequence (CDS)

ATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGA

Protein sequence

MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAWKEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR

Homology

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BLAST of Carg15382 vs. NCBI nr
Match: KAG7034682.1 (hypothetical protein SDJN02_04412 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR 168
           KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR
Sbjct: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR 167

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BLAST of Carg15382 vs. NCBI nr
Match: KAG6581397.1 (hypothetical protein SDJN03_21399, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           M AIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MNAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFYLRSS+ANNLPLAANLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYLRSSNANNLPLAANLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR 168
           KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR
Sbjct: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR 167

[Close]

BLAST of Carg15382 vs. NCBI nr
Match: XP_023543821.1 (uncharacterized protein LOC111803574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.5e-72
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISG FY   SDANNLPLAANLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGGFYFHFSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEISQTVTSGHLMALEA+VIILSVTQFIYTAIIV T TS
Sbjct: 121 KEISQTVTSGHLMALEAIVIILSVTQFIYTAIIVWTSTS 159

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BLAST of Carg15382 vs. NCBI nr
Match: XP_022925784.1 (uncharacterized protein LOC111433089 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 5.9e-72
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIA SIL FNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFY   SDANNLPLAANLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFHFSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEISQTVTSGHLMALEA +IILSVTQFIYTAIIVCT TS
Sbjct: 121 KEISQTVTSGHLMALEASLIILSVTQFIYTAIIVCTSTS 159

[Close]

BLAST of Carg15382 vs. NCBI nr
Match: XP_022978777.1 (uncharacterized protein LOC111478636 [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-66
Identity = 144/166 (86.75%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           M+AIA+SI FFNFC S++IFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MEAIAASISFFNFCISVIIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFY R S+ N      NLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFRFSNPN------NLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNV 167
           KEISQTVTS HLMALEA +IILSVTQFIYTAIIV T TS STRNNV
Sbjct: 121 KEISQTVTSEHLMALEAFLIILSVTQFIYTAIIVWTSTSYSTRNNV 160

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BLAST of Carg15382 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08
Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 2   KAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGF 61
           + + + +L  N    +++ G   W +NH       I  E   P          GN AT +
Sbjct: 6   RTMIAPLLVLNLIMYLIVIGFASWNLNH------YINGETNHPGV-------AGNGATFY 65

Query: 62  FVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAWK 121
           F+VFA++A V   AS ++G  ++RS  A+      +L   A+SALIA  +T LA G A K
Sbjct: 66  FLVFAILAGVVGAASKLAGVHHVRSWGAH------SLAAGAASALIAWAITALAFGLACK 125

Query: 122 EISQTVTSG-HLMALEALVIILSVTQFIYTAII 154
           EI      G  L  LEA VIIL+ TQ +Y A++
Sbjct: 126 EIHIGGYRGWRLRVLEAFVIILAFTQLLYVAML 139

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BLAST of Carg15382 vs. ExPASy TrEMBL
Match: A0A6J1ED64 (uncharacterized protein LOC111433089 OS=Cucurbita moschata OX=3662 GN=LOC111433089 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.9e-72
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIA SIL FNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFY   SDANNLPLAANLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFHFSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEISQTVTSGHLMALEA +IILSVTQFIYTAIIVCT TS
Sbjct: 121 KEISQTVTSGHLMALEASLIILSVTQFIYTAIIVCTSTS 159

[Close]

BLAST of Carg15382 vs. ExPASy TrEMBL
Match: A0A6J1IM08 (uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.0e-67
Identity = 144/166 (86.75%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           M+AIA+SI FFNFC S++IFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG
Sbjct: 1   MEAIAASISFFNFCISVIIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFVVFALIAAVATVASVISGSFY R S+ N      NLPPAASSALIACFLTFLAMGFAW
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFRFSNPN------NLPPAASSALIACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNV 167
           KEISQTVTS HLMALEA +IILSVTQFIYTAIIV T TS STRNNV
Sbjct: 121 KEISQTVTSEHLMALEAFLIILSVTQFIYTAIIVWTSTSYSTRNNV 160

[Close]

BLAST of Carg15382 vs. ExPASy TrEMBL
Match: A0A5A7UGF2 (AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001840 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.6e-59
Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIA+ ILFFNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFV+FALIAAVA VAS ISG+FY R SD      AANLPPAAS+AL+ACFLTFLAMGFAW
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRFSD------AANLPPAASTALVACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEI+ TVTSGHL+ALEAL+I+LSVTQF+YTAIIV T TS
Sbjct: 121 KEIAMTVTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Carg15382 vs. ExPASy TrEMBL
Match: A0A5D3CS83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008640 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.6e-59
Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIA+ ILFFNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATG
Sbjct: 34  MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 93

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFV+FALIAAVA VAS ISG+FY R SD      AANLPPAAS+AL+ACFLTFLAMGFAW
Sbjct: 94  FFVIFALIAAVAVVASAISGNFYFRFSD------AANLPPAASTALVACFLTFLAMGFAW 153

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEI+ TVTSGHL+ALEAL+I+LSVTQF+YTAIIV T TS
Sbjct: 154 KEIAMTVTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 186

[Close]

BLAST of Carg15382 vs. ExPASy TrEMBL
Match: A0A1S3AZB2 (uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.6e-59
Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MKAIA+ ILFFNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFV+FALIAAVA VAS ISG+FY R SD      AANLPPAAS+AL+ACFLTFLAMGFAW
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRYSD------AANLPPAASTALVACFLTFLAMGFAW 120

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTS 160
           KEI+ TVTSGHL+ALEAL+I+LSVTQF+YTAIIV T TS
Sbjct: 121 KEIAMTVTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Carg15382 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 141.4 bits (355), Expect = 6.8e-34
Identity = 78/153 (50.98%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           +K +AS +L  NFC  +++ GIGGW MN +ID+GF +G   E+P +FSPI+F +GN ATG
Sbjct: 6   IKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAATG 65

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FFV+FAL+A V   AS ISG  ++RS          +LP AA++A IA  LT LAMGFAW
Sbjct: 66  FFVIFALLAGVVGAASTISGLSHIRSW------TVGSLPAAATAATIAWTLTVLAMGFAW 125

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAII 154
           KEI     +  L  +EA +IILSVTQ IY A +
Sbjct: 126 KEIELQGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of Carg15382 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 132.1 bits (331), Expect = 4.1e-31
Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 1   MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60
           MK +AS +L  NFC   ++ GIG W MN +I++GF+IGA++ +P +FSPI F +GN ATG
Sbjct: 6   MKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAATG 65

Query: 61  FFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAW 120
           FF++FALIA VA  ASVISG  +L+S          +LP A S+A IA  LT LAMGF  
Sbjct: 66  FFIMFALIAGVAGAASVISGISHLQSW------TTTSLPAAVSAATIAWSLTLLAMGFGC 125

Query: 121 KEISQTVTSGHLMALEALVIILSVTQFIYTAII 154
           KEI   + +  L  +EA +IILS TQ +Y A I
Sbjct: 126 KEIELGMRNARLRTMEAFLIILSATQLLYIAAI 152

[Close]

BLAST of Carg15382 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-17
Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 2   KAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGF 61
           K+ A  +L  N     VI  I  W +NH I+      +   +P    PI+F +GN ATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 62  FVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAWK 121
           FV+F LIA V  +A+ ++G   +   D      + NL  AA+S+LI+  LT LAMG A K
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWD------SPNLHSAAASSLISWSLTLLAMGLACK 126

Query: 122 EISQTVTSGHLMALEALVIILSVTQFIYTAII 154
           EI+   T  +L  LE L II+S TQ + T  I
Sbjct: 127 EINIGWTEANLRTLEVLTIIVSATQLLCTGAI 152

[Close]

BLAST of Carg15382 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.9e-09
Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 4   IASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFV 63
           IA+ +LF N    +++ G   W +N  I NG      F             GN AT FF+
Sbjct: 9   IAAPLLFLNLVMYLIVLGFASWCLNKYI-NGQTNHPSFG------------GNGATPFFL 68

Query: 64  VFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAWKEI 123
            F+++AAV  VAS ++G+ ++R     N  LAA    A +S+++A  +T LAMG A K+I
Sbjct: 69  TFSILAAVVGVASKLAGANHIRF--WRNDSLAA----AGASSIVAWAITALAMGLACKQI 128

Query: 124 SQTVTSG-HLMALEALVIILSVTQFIYTAII 154
           +     G  L  +EA +IIL+ TQ +Y  +I
Sbjct: 129 NIGGWRGWRLKMIEAFIIILTFTQLLYLMLI 140

The following BLAST results are available for this feature:

BLAST of Carg15382 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034682.1	1.8e-81	100.00	hypothetical protein SDJN02_04412 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6581397.1	2.6e-80	98.80	hypothetical protein SDJN03_21399, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543821.1	3.5e-72	95.60	uncharacterized protein LOC111803574 [Cucurbita pepo subsp. pepo]	[more]
XP_022925784.1	5.9e-72	94.97	uncharacterized protein LOC111433089 [Cucurbita moschata]	[more]
XP_022978777.1	1.7e-66	86.75	uncharacterized protein LOC111478636 [Cucurbita maxima]	[more]

BLAST of Carg15382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	3.7e-08	34.64	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Carg15382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED64	2.9e-72	94.97	uncharacterized protein LOC111433089 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IM08	8.0e-67	86.75	uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636...	[more]
A0A5A7UGF2	1.6e-59	80.50	AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120...	[more]
A0A5D3CS83	1.6e-59	80.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZB2	1.6e-59	80.50	uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=...	[more]

BLAST of Carg15382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29520.1	6.8e-34	50.98	AWPM-19-like family protein	[more]
AT5G46530.1	4.1e-31	50.33	AWPM-19-like family protein	[more]
AT5G18970.1	5.8e-17	39.47	AWPM-19-like family protein	[more]
AT1G04560.1	9.9e-09	35.10	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 10..153 e-value: 9.2E-39 score: 132.9
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..156
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15382-RA	Carg15382-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane