Carg15329 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15329
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase ATL41-like
Location	Carg_Chr03: 9312966 .. 9313706 (-)
RNA-Seq Expression	Carg15329
Synteny	Carg15329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGCGACGGAACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATACGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

mRNA sequence

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGCGACGGAACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATACGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

Coding sequence (CDS)

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGCGACGGAACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATACGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

Protein sequence

MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRPADMERQ

Homology

[Close]

BLAST of Carg15329 vs. NCBI nr
Match: KAG7034629.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.3 bits (1235), Expect = 9.7e-132
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 247
           ADMERQ
Sbjct: 241 ADMERQ 246

[Close]

BLAST of Carg15329 vs. NCBI nr
Match: KAG6581344.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472.6 bits (1215), Expect = 2.0e-129
Identity = 243/246 (98.78%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA T PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQ GS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 247
           ADMERQ
Sbjct: 241 ADMERQ 246

[Close]

BLAST of Carg15329 vs. NCBI nr
Match: XP_022925918.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita moschata])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 239/246 (97.15%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAAAT PAPKAGLDPVLIAKLLQESIH+QADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATAPAPKAGLDPVLIAKLLQESIHEQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATE GE PTAPPLEEEQ GS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEDGETPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVH CGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHRCGEGSVRP 240

Query: 241 ADMERQ 247
           AD+ERQ
Sbjct: 241 ADLERQ 246

[Close]

BLAST of Carg15329 vs. NCBI nr
Match: XP_022978748.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima])

HSP 1 Score: 464.2 bits (1193), Expect = 7.2e-127
Identity = 238/246 (96.75%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKI+ISAIFSL VVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 12  MGSDDEDHHLRKFQSRHKILISAIFSLLVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 71

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA T PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 72  SRADRQNHTAATAAGTAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 131

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP VTATEHGEAPTAPPLEEEQ G 
Sbjct: 132 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPTVTATEHGEAPTAPPLEEEQSGF 191

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 192 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 251

Query: 241 ADMERQ 247
           AD+ERQ
Sbjct: 252 ADLERQ 257

[Close]

BLAST of Carg15329 vs. NCBI nr
Match: XP_023544672.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQ+RHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQARHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATA    PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATA----PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRT VEPIVTATEHGEAPTAPPLEEEQ GS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTGVEPIVTATEHGEAPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 247
           ADMERQ
Sbjct: 241 ADMERQ 242

[Close]

BLAST of Carg15329 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.5e-26
Identity = 90/265 (33.96%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRH--------------KIMISAIFSLFVVVLVILFLHFYLRYLHR 60
           M S+D DH  R+F S H              KIM++A+ SL  V+L++  LH Y R++ R
Sbjct: 1   MSSNDRDH--RRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR 60

Query: 61  RRRQS---RLINLEHQISRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADH 120
           RRR++     +   H                     PK GL+P +IA L   ++      
Sbjct: 61  RRREAFRGLPVIFRHPFE-----------------MPKRGLNPTVIASLPTFTVGATDGV 120

Query: 121 HGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP---IVT 180
                EC++CLS ++E+   R LPNCKHIFHV+C+D WL + +TCPVCRT VEP   +  
Sbjct: 121 AASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEP 180

Query: 181 ATEHGEAPTAPPLEEEQYGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMM 240
               G   TAP L  E   +       + S +    V P          +SRL+SFR+++
Sbjct: 181 EPREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSP----------ASRLNSFRKIL 235

Query: 241 SRDRERSFRVHSCGEGSVRPADMER 246
           +R+R  +   HSC +   R AD+ER
Sbjct: 241 TRERSSNRINHSCPDQD-RVADLER 235

[Close]

BLAST of Carg15329 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 89/244 (36.48%), Postives = 123/244 (50.41%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLR-YLHRRRRQSRLINLEHQISRADRQNHTA-ATAAA 77
           KIM+SAI  LF VV++++FLH Y R YL R RR  R +    +  RA     TA  + AA
Sbjct: 29  KIMLSAIVILFFVVILMVFLHLYARWYLLRARR--RHLRRRSRNRRATMVFFTADPSTAA 88

Query: 78  TEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHV 137
           T      GLDP +I  L   +   +   H + +EC++CLS  EE  T R+LPNC+H FHV
Sbjct: 89  TSVVASRGLDPNVIKSLPVFTFSDET--HKDPIECAVCLSEFEESETGRVLPNCQHTFHV 148

Query: 138 ECIDMWLFSNTTCPVCRTAVE--------------PIVTATEHG-----EAPTAPPLEEE 197
           +CIDMW  S++TCP+CR+ VE               +V A +       E  ++  L +E
Sbjct: 149 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 208

Query: 198 QYGSRFSSF---------------RRTMSRERSQTVQPTAPPLTEEQS-SSRLSSFRRMM 225
            +GS  S                 RRT S    +  +  +P     +S  SR+ SF RM+
Sbjct: 209 PHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRML 268

[Close]

BLAST of Carg15329 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-22
Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 0


Query: 7   DHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQ 66
           +H   ++    KIM++++  LFV V++IL  H Y R+L RR+ +     +  +IS     
Sbjct: 16  NHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNR----RIRRRISA---- 75

Query: 67  NHTAATAAATEPAPKAG----LDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKAT 126
            H  + AAA +P   +     LDP ++ K +   ++    H   + ECS+CLS  EE   
Sbjct: 76  -HLRSLAAARDPTQSSSSLSPLDPTVLEK-IPIFVYSVKTHESPLEECSVCLSEFEEDDE 135

Query: 127 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEA----PTAPPLEEEQY 186
            R+LP C H+FHV+CID W  S ++CP+CR  V+P    TE        P+  P+E+ + 
Sbjct: 136 GRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEA 195

Query: 187 GSRFSSFRRTMSRERSQTVQPTAPPL 205
           GS  SS     S   S +  P   P+
Sbjct: 196 GSSSSSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Carg15329 vs. ExPASy Swiss-Prot
Match: Q9SLC4 (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-19
Identity = 83/255 (32.55%), Postives = 120/255 (47.06%), Query Frame = 0


Query: 3   SDDED--HHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRY-LHRRRRQSRLINLEHQ 62
           SDD     +   + +  KI +    S  ++++++   + Y ++ LHRR     L      
Sbjct: 10  SDDRSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRSAFQDL------ 69

Query: 63  ISRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEE 122
                      + +  ++P PK GLD ++IA L    +  + D  G   EC++CLS +EE
Sbjct: 70  -----------SFSVVSQP-PKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEE 129

Query: 123 KATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYG 182
           K   R+LPNCKH+FHV C+D WL + +TCPVCRT  E           P+ P LE E   
Sbjct: 130 KDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE-----------PSHPRLEPE--- 189

Query: 183 SRFSSFRRTMSRERSQTVQPTAPPL--------TEEQSSSRLSSFRRMMSRDRERSFRVH 242
                        R   V   APPL        T   S SRL SFRR+++R+R  + R H
Sbjct: 190 ------------PREGPVGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDH 217

Query: 243 SCGEGSVRPADMERQ 247
           S  +   R  D+ERQ
Sbjct: 250 SRVDQD-RELDIERQ 217

[Close]

BLAST of Carg15329 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.3e-17
Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAATE 77
           KIM+S++  LFV V++IL  H Y R+L RR  +        +I R  R +    +A+  +
Sbjct: 27  KIMLSSVIVLFVAVIMILCFHSYARWLFRRHNR--------RIRRRIRSHLRTLSASPRD 86

Query: 78  PAPKAGLDPVLIAKL-LQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVE 137
            A    LD  ++ K+ +     K      E  ECS+CLS  EE+   R+LP C H FHV+
Sbjct: 87  QA----LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVD 146

Query: 138 CIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPL 174
           CID W  S +TCP+CR  V+P     E G + ++ PL
Sbjct: 147 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]

BLAST of Carg15329 vs. ExPASy TrEMBL
Match: A0A6J1EGK8 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita moschata OX=3662 GN=LOC111433191 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127
Identity = 239/246 (97.15%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAAAT PAPKAGLDPVLIAKLLQESIH+QADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATAPAPKAGLDPVLIAKLLQESIHEQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATE GE PTAPPLEEEQ GS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEDGETPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVH CGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHRCGEGSVRP 240

Query: 241 ADMERQ 247
           AD+ERQ
Sbjct: 241 ADLERQ 246

[Close]

BLAST of Carg15329 vs. ExPASy TrEMBL
Match: A0A6J1IU63 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC111478612 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 238/246 (96.75%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKI+ISAIFSL VVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 12  MGSDDEDHHLRKFQSRHKILISAIFSLLVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 71

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA T PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 72  SRADRQNHTAATAAGTAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 131

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP VTATEHGEAPTAPPLEEEQ G 
Sbjct: 132 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPTVTATEHGEAPTAPPLEEEQSGF 191

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 192 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 251

Query: 241 ADMERQ 247
           AD+ERQ
Sbjct: 252 ADLERQ 257

[Close]

BLAST of Carg15329 vs. ExPASy TrEMBL
Match: A0A5D3CQ84 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007960 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 212/247 (85.83%), Postives = 224/247 (90.69%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HT A+A AT P PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHT-ASATATAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQYG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQ G
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSFRVHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVR 240

Query: 241 PADMERQ 247
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Carg15329 vs. ExPASy TrEMBL
Match: A0A1S3B099 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 212/247 (85.83%), Postives = 224/247 (90.69%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HT A+A AT P PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHT-ASATATAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQYG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQ G
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSFRVHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVR 240

Query: 241 PADMERQ 247
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Carg15329 vs. ExPASy TrEMBL
Match: A0A5A7UA65 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002520 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.1e-107
Identity = 210/247 (85.02%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HT A+A AT P PK GLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHT-ASATATAP-PKVGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQYG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQ G
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSF VHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFGVHSCGEASVR 240

Query: 241 PADMERQ 247
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Carg15329 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-27
Identity = 90/265 (33.96%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRH--------------KIMISAIFSLFVVVLVILFLHFYLRYLHR 60
           M S+D DH  R+F S H              KIM++A+ SL  V+L++  LH Y R++ R
Sbjct: 1   MSSNDRDH--RRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR 60

Query: 61  RRRQS---RLINLEHQISRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADH 120
           RRR++     +   H                     PK GL+P +IA L   ++      
Sbjct: 61  RRREAFRGLPVIFRHPFE-----------------MPKRGLNPTVIASLPTFTVGATDGV 120

Query: 121 HGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP---IVT 180
                EC++CLS ++E+   R LPNCKHIFHV+C+D WL + +TCPVCRT VEP   +  
Sbjct: 121 AASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEP 180

Query: 181 ATEHGEAPTAPPLEEEQYGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMM 240
               G   TAP L  E   +       + S +    V P          +SRL+SFR+++
Sbjct: 181 EPREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSP----------ASRLNSFRKIL 235

Query: 241 SRDRERSFRVHSCGEGSVRPADMER 246
           +R+R  +   HSC +   R AD+ER
Sbjct: 241 TRERSSNRINHSCPDQD-RVADLER 235

[Close]

BLAST of Carg15329 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 89/244 (36.48%), Postives = 123/244 (50.41%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLR-YLHRRRRQSRLINLEHQISRADRQNHTA-ATAAA 77
           KIM+SAI  LF VV++++FLH Y R YL R RR  R +    +  RA     TA  + AA
Sbjct: 29  KIMLSAIVILFFVVILMVFLHLYARWYLLRARR--RHLRRRSRNRRATMVFFTADPSTAA 88

Query: 78  TEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHV 137
           T      GLDP +I  L   +   +   H + +EC++CLS  EE  T R+LPNC+H FHV
Sbjct: 89  TSVVASRGLDPNVIKSLPVFTFSDET--HKDPIECAVCLSEFEESETGRVLPNCQHTFHV 148

Query: 138 ECIDMWLFSNTTCPVCRTAVE--------------PIVTATEHG-----EAPTAPPLEEE 197
           +CIDMW  S++TCP+CR+ VE               +V A +       E  ++  L +E
Sbjct: 149 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 208

Query: 198 QYGSRFSSF---------------RRTMSRERSQTVQPTAPPLTEEQS-SSRLSSFRRMM 225
            +GS  S                 RRT S    +  +  +P     +S  SR+ SF RM+
Sbjct: 209 PHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRML 268

[Close]

BLAST of Carg15329 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-23
Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 0


Query: 7   DHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQ 66
           +H   ++    KIM++++  LFV V++IL  H Y R+L RR+ +     +  +IS     
Sbjct: 16  NHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNR----RIRRRISA---- 75

Query: 67  NHTAATAAATEPAPKAG----LDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKAT 126
            H  + AAA +P   +     LDP ++ K +   ++    H   + ECS+CLS  EE   
Sbjct: 76  -HLRSLAAARDPTQSSSSLSPLDPTVLEK-IPIFVYSVKTHESPLEECSVCLSEFEEDDE 135

Query: 127 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEA----PTAPPLEEEQY 186
            R+LP C H+FHV+CID W  S ++CP+CR  V+P    TE        P+  P+E+ + 
Sbjct: 136 GRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEA 195

Query: 187 GSRFSSFRRTMSRERSQTVQPTAPPL 205
           GS  SS     S   S +  P   P+
Sbjct: 196 GSSSSSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Carg15329 vs. TAIR 10
Match: AT2G42350.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-21
Identity = 83/255 (32.55%), Postives = 120/255 (47.06%), Query Frame = 0


Query: 3   SDDED--HHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRY-LHRRRRQSRLINLEHQ 62
           SDD     +   + +  KI +    S  ++++++   + Y ++ LHRR     L      
Sbjct: 10  SDDRSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRSAFQDL------ 69

Query: 63  ISRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEE 122
                      + +  ++P PK GLD ++IA L    +  + D  G   EC++CLS +EE
Sbjct: 70  -----------SFSVVSQP-PKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEE 129

Query: 123 KATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYG 182
           K   R+LPNCKH+FHV C+D WL + +TCPVCRT  E           P+ P LE E   
Sbjct: 130 KDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE-----------PSHPRLEPE--- 189

Query: 183 SRFSSFRRTMSRERSQTVQPTAPPL--------TEEQSSSRLSSFRRMMSRDRERSFRVH 242
                        R   V   APPL        T   S SRL SFRR+++R+R  + R H
Sbjct: 190 ------------PREGPVGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDH 217

Query: 243 SCGEGSVRPADMERQ 247
           S  +   R  D+ERQ
Sbjct: 250 SRVDQD-RELDIERQ 217

[Close]

BLAST of Carg15329 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-18
Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAATE 77
           KIM+S++  LFV V++IL  H Y R+L RR  +        +I R  R +    +A+  +
Sbjct: 27  KIMLSSVIVLFVAVIMILCFHSYARWLFRRHNR--------RIRRRIRSHLRTLSASPRD 86

Query: 78  PAPKAGLDPVLIAKL-LQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVE 137
            A    LD  ++ K+ +     K      E  ECS+CLS  EE+   R+LP C H FHV+
Sbjct: 87  QA----LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVD 146

Query: 138 CIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPL 174
           CID W  S +TCP+CR  V+P     E G + ++ PL
Sbjct: 147 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

The following BLAST results are available for this feature:

BLAST of Carg15329 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034629.1	9.7e-132	100.00	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6581344.1	2.0e-129	98.78	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925918.1	4.2e-127	97.15	E3 ubiquitin-protein ligase ATL41-like [Cucurbita moschata]	[more]
XP_022978748.1	7.2e-127	96.75	E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima]	[more]
XP_023544672.1	2.7e-126	97.15	E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15329 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLC3	7.5e-26	33.96	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]
Q8L9T5	2.3e-22	36.48	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LZJ6	8.6e-22	33.01	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9SLC4	1.4e-19	32.55	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1	[more]
O22255	6.3e-17	36.94	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]

BLAST of Carg15329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGK8	2.1e-127	97.15	E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IU63	3.5e-127	96.75	E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC1114786...	[more]
A0A5D3CQ84	1.6e-108	85.83	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B099	1.6e-108	85.83	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 P...	[more]
A0A5A7UA65	3.1e-107	85.02	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Carg15329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42360.1	5.3e-27	33.96	RING/U-box superfamily protein	[more]
AT3G16720.1	1.6e-23	36.48	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	6.1e-23	33.01	AtL5	[more]
AT2G42350.1	9.7e-21	32.55	RING/U-box superfamily protein	[more]
AT2G47560.1	4.5e-18	36.94	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 110..151 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 109..152 e-value: 2.2E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 110..152 score: 12.84335
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..158 e-value: 2.3E-20 score: 74.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..246
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..246
None	No IPR available	PANTHER	PTHR14155:SF558	RING-H2 FINGER PROTEIN ATL40-LIKE	coord: 1..246
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 109..152 e-value: 3.1823E-16 score: 68.4907
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 109..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15329-RA	Carg15329-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane