Carg15291 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15291
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Carg_Chr03: 9124796 .. 9126868 (-)
RNA-Seq Expression	Carg15291
Synteny	Carg15291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCAACTCTCTCTCCCTTCTCGGTTTTCTTTTCCATCTCCAACTTTTTCAGTTTTGCATTAACTTTGCCTCTTTACGAGGAAGGCACTGCAAGCAAACTGCCGATTCTCCCTCCCTCTCAGGTGAACCACTGAATTTGAACTTTCATGATTACTTCTACATGTTTTTTTTTTCTTCGCAACTACGGTTTTCTTCGTTTCGCTGTGAATTTGTCCGTGGAGGTCGAAGTTTTGACGATTCTTTCCATTTGTTAATTGATCCTTTTTCCTTTAAGTTTCTTTCATTCCGGACAAGTGAGAAAGGAAAGTGGTGTCTCGATTCTGGAGTTGATAAATCAATAGGTTTCTGCTTGCATATCATTAATTTGCGCTGTAGGTCGAATTGAACGGTAGCGTGATGGGTTAATAAAAGCACACTGAGGAGACCATGTGTCAGGATTACATTTTTCTTCTTGGCGAACTAGTTAGATTATCACTTAACGTTCATGTATTTATTCGTTTTGGAATATGAATAAATCTGGGTATGCTGGCCCTTCTTGTATTATGCTCGTGGTTAGTTCTAACAGGTCTCTATTTGACTACTTTAATTGCTAATTCATTACAATAGCTGATGAAGTTCTACAAAGCGTCGTATCTAAACACATCAGTAAATCAATTTGAGTTCACCTTTTGGCTGATTGATTCTACTGGGCTTTGAGTTTTTTTAGAATTTTTTCCAGTTCTGGTTGGTTTGGTTTGTCCGTAACCTGTTAATAGTCTGTTTCATTTTGGGGTTCCCATTCAGTAATTAAACTAGGATGAGTTAATTGGGCATGATCGAACTCTTTGAAGTAAAGTCGGTCAGATGGTTGGTGGCTTCCAGTTGGGTTTTAGGTGTTTTAACTGATTCACTAACCTTCTGTTTTGGTGTTCTGTAAATGTTCTATTGTTTTCAACTTTCTTCCCTCTAACCTTAAACTTAGCTTCAAATTCTGCTTTATAGTTAATGTTTACCATTTGAGGTCCCACGTTTGATGGGAATGAAACATTCTTTATAAGGGTGTAGAAACCTCTTCCTAGTATTTTAAAACCATAAGGCTGACAACGATATGTAACGGGTCAAAGCAAACAATATCTGCTAGCGTGGGCTTTGGCTGTTACAAATGAAATCAGAGCCAGACATCAGGTAGTGTGCCAGCGAGGACGTTGGTCTCTAAGGAAGTGGATTGTGAGATTCCACATATGTTTTAAAATCGTGAGGCTGACGATGATACGTAACGAAACAAAGCGAACAATATCTACGATCAATGAGATTGGGCGGTTACAGCCTAATTCCAGATTCCAGACGAGAAATTTGATGTCTGATTTGTTTTTGTGTGCTTTTCCAGGAAATAACTGGAGTTGCTTGATCAATTCATGGCCTATGAGCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTAGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATCATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGTTTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACAGGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTC

mRNA sequence

TTATCAACTCTCTCTCCCTTCTCGGTTTTCTTTTCCATCTCCAACTTTTTCAGTTTTGCATTAACTTTGCCTCTTTACGAGGAAGGCACTGCAAGCAAACTGCCGATTCTCCCTCCCTCTCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTAGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATCATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGTTTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACAGGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTC

Coding sequence (CDS)

TTATCAACTCTCTCTCCCTTCTCGGTTTTCTTTTCCATCTCCAACTTTTTCAGTTTTGCATTAACTTTGCCTCTTTACGAGGAAGGCACTGCAAGCAAACTGCCGATTCTCCCTCCCTCTCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTAGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATCATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGTTTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACAGGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTC

Protein sequence

LSTLSPFSVFFSISNFFSFALTLPLYEEGTASKLPILPPSQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF

Homology

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BLAST of Carg15291 vs. NCBI nr
Match: KAG7034591.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 550.8 bits (1418), Expect = 6.3e-153
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   LSTLSPFSVFFSISNFFSFALTLPLYEEGTASKLPILPPSQYFVQGWKHYNGCFDCNICF 60
           LSTLSPFSVFFSISNFFSFALTLPLYEEGTASKLPILPPSQYFVQGWKHYNGCFDCNICF
Sbjct: 1   LSTLSPFSVFFSISNFFSFALTLPLYEEGTASKLPILPPSQYFVQGWKHYNGCFDCNICF 60

Query: 61  DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGRGRT 120
           DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGRGRT
Sbjct: 61  DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGRGRT 120

Query: 121 AEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEE 180
           AEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEE
Sbjct: 121 AEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEE 180

Query: 181 DSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNLNSYLGTGSRRDGLRRQEMQV 240
           DSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNLNSYLGTGSRRDGLRRQEMQV
Sbjct: 181 DSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNLNSYLGTGSRRDGLRRQEMQV 240

Query: 241 AKSLNRISIFLFCCVILCVLVF 263
           AKSLNRISIFLFCCVILCVLVF
Sbjct: 241 AKSLNRISIFLFCCVILCVLVF 262

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BLAST of Carg15291 vs. NCBI nr
Match: XP_022925786.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022925787.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata])

HSP 1 Score: 473.8 bits (1218), Expect = 9.7e-130
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 64

Query: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160
           VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 65  VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124

Query: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184

Query: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 185 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

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BLAST of Carg15291 vs. NCBI nr
Match: XP_023543343.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023543345.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHL+CWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLFCWPCIYKWLHVQSASLAIDEHPQCP 64

Query: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160
           VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 65  VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124

Query: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184

Query: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 185 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of Carg15291 vs. NCBI nr
Match: XP_022979030.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022979031.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 468.8 bits (1205), Expect = 3.1e-128
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 64

Query: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160
           VCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 65  VCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124

Query: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184

Query: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           NSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 185 NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 226

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BLAST of Carg15291 vs. NCBI nr
Match: XP_038881993.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881995.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881996.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881997.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881998.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 409.8 bits (1052), Expect = 1.7e-110
Identity = 197/237 (83.12%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 41  QYFVQGWKH-----------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSA 100
           QYF QGWKH           Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQSA
Sbjct: 5   QYFAQGWKHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSA 64

Query: 101 SLAIDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQML 160
           SLAIDEHPQCPVCKADISHTTMVPLYGRG+TAE+VEPEAKAMH DI+IPPRPSACGNQML
Sbjct: 65  SLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQML 124

Query: 161 ATPSTHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFV 220
           ATPS HQQQLPYRNPYQ+PNHDP+LFGN+EEDSAA LLNL RTSFSGF H + GMIG+FV
Sbjct: 125 ATPSIHQQQLPYRNPYQQPNHDPLLFGNYEEDSAAPLLNLARTSFSGFHHPLVGMIGDFV 184

Query: 221 YARVFGNSDNL----NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           +ARVFGNSDNL    NSY  TGS R+ LRRQEMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 185 HARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 241

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BLAST of Carg15291 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.9e-41
Identity = 98/228 (42.98%), Postives = 134/228 (58.77%), Query Frame = 0


Query: 48  KHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--AIDEHPQCPVCKAD 107
           ++ +G FDCNIC D  HEPV+TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA+
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 108 ISHTTMVPLYGRGRTAEQVEP-EAKAMHRDIDIPPRPSA--CGNQ-MLATPSTHQQQLPY 167
           +S  T++PLYGRG   +  +P E KA +  I IP RP +  CG   +L T  ++  QL  
Sbjct: 93  VSEKTLIPLYGRG--GQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQ 152

Query: 168 RNPYQRPN--HDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDN 227
           R  YQ+ +    P   G++    ++ +L+ G  + +   H    MIG   YAR+FGNS  
Sbjct: 153 RRGYQQQSQTRQPAYQGSY---MSSPMLSPGGATANMLQH---SMIGEVAYARIFGNSST 212

Query: 228 L-----NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
                 NSY    S    +RRQ  Q  +SL RI  FLFCC + C+++F
Sbjct: 213 TMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

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BLAST of Carg15291 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.7e-41
Identity = 95/225 (42.22%), Postives = 127/225 (56.44%), Query Frame = 0


Query: 46  GWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHP-QCPVCKA 105
           G  + +GCFDCNIC D AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK+
Sbjct: 34  GQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93

Query: 106 DISHTTMVPLYGRGRTAEQVEPEAK---AMHRDIDIPPRPSACGNQMLATPSTHQQQLPY 165
           +I+ T++VPLYGRG ++      +K   A+  DI   P PSA  N + +  S        
Sbjct: 94  NITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSL------- 153

Query: 166 RNPYQRPNHDPVLFGNHEED----SAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNS 225
            NP  +       F NH+      +     +L       F + V GM G+ VY R+FG  
Sbjct: 154 -NPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTF 213

Query: 226 DNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
            N  +      R        MQ  KSLNR+SIF  CC+ILC+L+F
Sbjct: 214 TNTIAQPYQSQRM-------MQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of Carg15291 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-34
Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 0


Query: 15  NFFSFALTLPLYEEGT---ASKLPILPPSQYFVQGWKHYNGCFDCNICFDFAHEPVVTLC 74
           +F   AL   LY EG     SK P   P    V      +  FDCNIC D   EPVVTLC
Sbjct: 6   SFEDAALLGELYGEGAFCFKSKKP--EPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 65

Query: 75  GHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAK 134
           GHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+VPLYGRGR   Q E +  
Sbjct: 66  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 125

Query: 135 AMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNL 194
              R +    R     +   +T     Q++ + +P +   + PV          + +++ 
Sbjct: 126 VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE--GYYPV----------SGVMSS 185

Query: 195 GRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGTGSRRDGLRRQEMQVAKSL 254
              S+S     V  M+G  V  R+FG    D     ++Y   G+    +RR+ MQ  KSL
Sbjct: 186 NSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSL 245

Query: 255 NRISIFLFCCVILCVLVF 263
            RI  F  CCV+LC+L+F
Sbjct: 246 GRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg15291 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 74/219 (33.79%), Postives = 109/219 (49.77%), Query Frame = 0


Query: 52  GCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSAS-LAIDEH------PQCPVCKA 111
           G FDCNIC D   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 112 DISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNP 171
           D+S  T+VP+YGRG+         KA     ++P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 172 YQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFG-NSDNLNSY 231
           Y+ P  DPV+                            G++   VY R+FG +S N+  Y
Sbjct: 137 YRMP--DPVM----------------------------GVVCEMVYRRLFGESSSNMAPY 193

Query: 232 LGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
                R    RR+ MQ  +SL+R+ +FL C + +C+ +F
Sbjct: 197 RDMNVRS---RRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Carg15291 vs. ExPASy Swiss-Prot
Match: Q99942 (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 54  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVP 113
           F+CNIC + A E VV++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VP
Sbjct: 25  FECNICLETAREAVVSVCGHLYCWPCLHQWLETR------PERQECPVCKAGISREKVVP 84

Query: 114 LYGRGRTAEQVEPEAKAMHRDIDIPPRP 142
           LYGRG    Q +P  K        PPRP
Sbjct: 85  LYGRGSQKPQ-DPRLKT-------PPRP 98

[Close]

BLAST of Carg15291 vs. ExPASy TrEMBL
Match: A0A6J1ED53 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111433091 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 64

Query: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160
           VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 65  VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124

Query: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184

Query: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 185 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of Carg15291 vs. ExPASy TrEMBL
Match: A0A6J1IPM2 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111478794 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.5e-128
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 64

Query: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160
           VCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 65  VCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124

Query: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184

Query: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           NSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 185 NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of Carg15291 vs. ExPASy TrEMBL
Match: A0A0A0KK60 (Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.2e-110
Identity = 195/234 (83.33%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 41  QYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 100
           QYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA
Sbjct: 5   QYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 64

Query: 101 IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATP 160
           IDEHPQCPVCKADISHTTMVPLYGRG+TAE+VEPE KAMH DI+IPPRPSACGNQ+LATP
Sbjct: 65  IDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILATP 124

Query: 161 STHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYAR 220
           STHQQQLPYRNPYQRPNHDP+LF N+EEDSA+ LLNL RTSFS F H V GMIG+FV+AR
Sbjct: 125 STHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMIGDFVHAR 184

Query: 221 VFGNSDNL----NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           VFGNSDNL    NSY  TGS R+ LRRQEMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 185 VFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of Carg15291 vs. ExPASy TrEMBL
Match: A0A5A7UGP7 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007450 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.3e-108
Identity = 194/234 (82.91%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 41  QYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 100
           QYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA
Sbjct: 5   QYFAQGWKHVSGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 64

Query: 101 IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATP 160
           IDEHPQCPVCKADISHTTMVPLYGRG+ AE+VE EAKAMHRDI+IPPRPSACGNQ+LATP
Sbjct: 65  IDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACGNQILATP 124

Query: 161 STHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYAR 220
           STHQQQLPYRNPYQRPNHDP+LF N+EE SA+ LLNL RTSFS F H V GMIG+FV+AR
Sbjct: 125 STHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMIGDFVHAR 184

Query: 221 VFGNSDNL----NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           VFGNSDNL    NSY  TGS R+ LRRQEMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 185 VFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of Carg15291 vs. ExPASy TrEMBL
Match: A0A1S3AZB8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.3e-108
Identity = 194/234 (82.91%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 41  QYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 100
           QYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA
Sbjct: 5   QYFAQGWKHVSGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA 64

Query: 101 IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATP 160
           IDEHPQCPVCKADISHTTMVPLYGRG+ AE+VE EAKAMHRDI+IPPRPSACGNQ+LATP
Sbjct: 65  IDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACGNQILATP 124

Query: 161 STHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYAR 220
           STHQQQLPYRNPYQRPNHDP+LF N+EE SA+ LLNL RTSFS F H V GMIG+FV+AR
Sbjct: 125 STHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMIGDFVHAR 184

Query: 221 VFGNSDNL----NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
           VFGNSDNL    NSY  TGS R+ LRRQEMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 185 VFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of Carg15291 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-42
Identity = 95/225 (42.22%), Postives = 127/225 (56.44%), Query Frame = 0


Query: 46  GWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHP-QCPVCKA 105
           G  + +GCFDCNIC D AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK+
Sbjct: 34  GQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93

Query: 106 DISHTTMVPLYGRGRTAEQVEPEAK---AMHRDIDIPPRPSACGNQMLATPSTHQQQLPY 165
           +I+ T++VPLYGRG ++      +K   A+  DI   P PSA  N + +  S        
Sbjct: 94  NITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSL------- 153

Query: 166 RNPYQRPNHDPVLFGNHEED----SAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNS 225
            NP  +       F NH+      +     +L       F + V GM G+ VY R+FG  
Sbjct: 154 -NPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTF 213

Query: 226 DNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
            N  +      R        MQ  KSLNR+SIF  CC+ILC+L+F
Sbjct: 214 TNTIAQPYQSQRM-------MQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of Carg15291 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-35
Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 0


Query: 15  NFFSFALTLPLYEEGT---ASKLPILPPSQYFVQGWKHYNGCFDCNICFDFAHEPVVTLC 74
           +F   AL   LY EG     SK P   P    V      +  FDCNIC D   EPVVTLC
Sbjct: 6   SFEDAALLGELYGEGAFCFKSKKP--EPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 65

Query: 75  GHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAK 134
           GHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+VPLYGRGR   Q E +  
Sbjct: 66  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 125

Query: 135 AMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNL 194
              R +    R     +   +T     Q++ + +P +   + PV          + +++ 
Sbjct: 126 VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE--GYYPV----------SGVMSS 185

Query: 195 GRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGTGSRRDGLRRQEMQVAKSL 254
              S+S     V  M+G  V  R+FG    D     ++Y   G+    +RR+ MQ  KSL
Sbjct: 186 NSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSL 245

Query: 255 NRISIFLFCCVILCVLVF 263
            RI  F  CCV+LC+L+F
Sbjct: 246 GRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg15291 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-35
Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 0


Query: 15  NFFSFALTLPLYEEGT---ASKLPILPPSQYFVQGWKHYNGCFDCNICFDFAHEPVVTLC 74
           +F   AL   LY EG     SK P   P    V      +  FDCNIC D   EPVVTLC
Sbjct: 6   SFEDAALLGELYGEGAFCFKSKKP--EPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 65

Query: 75  GHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEPEAK 134
           GHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+VPLYGRGR   Q E +  
Sbjct: 66  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 125

Query: 135 AMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNHEEDSAASLLNL 194
              R +    R     +   +T     Q++ + +P +   + PV          + +++ 
Sbjct: 126 VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE--GYYPV----------SGVMSS 185

Query: 195 GRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGTGSRRDGLRRQEMQVAKSL 254
              S+S     V  M+G  V  R+FG    D     ++Y   G+    +RR+ MQ  KSL
Sbjct: 186 NSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSL 245

Query: 255 NRISIFLFCCVILCVLVF 263
            RI  F  CCV+LC+L+F
Sbjct: 246 GRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg15291 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 74/219 (33.79%), Postives = 109/219 (49.77%), Query Frame = 0


Query: 52  GCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSAS-LAIDEH------PQCPVCKA 111
           G FDCNIC D   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 112 DISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNP 171
           D+S  T+VP+YGRG+         KA     ++P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 172 YQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFG-NSDNLNSY 231
           Y+ P  DPV+                            G++   VY R+FG +S N+  Y
Sbjct: 137 YRMP--DPVM----------------------------GVVCEMVYRRLFGESSSNMAPY 193

Query: 232 LGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 263
                R    RR+ MQ  +SL+R+ +FL C + +C+ +F
Sbjct: 197 RDMNVRS---RRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Carg15291 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-23
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 54  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVP 113
           F+CNIC D A +P+VTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VP
Sbjct: 21  FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCPVCKAVIEEDRLVP 80

Query: 114 LYGRGRTAEQVEPEAKAMHRDIDIPPRPS 143
           LYGRG+++   +P +K++   +++P RPS
Sbjct: 81  LYGRGKSS--ADPRSKSI-PGLEVPNRPS 100

The following BLAST results are available for this feature:

BLAST of Carg15291 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034591.1	6.3e-153	100.00	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022925786.1	9.7e-130	99.55	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022925787.1 E3 ...	[more]
XP_023543343.1	2.8e-129	99.10	E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023543345...	[more]
XP_022979030.1	3.1e-128	98.65	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022979031.1 E3 ub...	[more]
XP_038881993.1	1.7e-110	83.12	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 u...	[more]

BLAST of Carg15291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	3.9e-41	42.98	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	6.7e-41	42.22	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	4.7e-34	37.60	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	3.6e-26	33.79	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q99942	1.4e-17	48.86	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]

BLAST of Carg15291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED53	4.7e-130	99.55	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IPM2	1.5e-128	98.65	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A0A0KK60	9.2e-110	83.33	Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1	[more]
A0A5A7UGP7	2.3e-108	82.91	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AZB8	2.3e-108	82.91	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 ...	[more]

BLAST of Carg15291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	4.8e-42	42.22	RING membrane-anchor 3	[more]
AT4G03510.1	3.3e-35	37.60	RING membrane-anchor 1	[more]
AT4G03510.2	3.3e-35	37.60	RING membrane-anchor 1	[more]
AT4G28270.1	2.5e-27	33.79	RING membrane-anchor 2	[more]
AT1G19310.1	2.9e-23	51.69	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 56..102 e-value: 2.7E-8 score: 43.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 56..103 score: 12.415513
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 56..102 e-value: 4.0E-8 score: 33.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 43..137 e-value: 5.5E-16 score: 60.2
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 48..262
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 54..104 e-value: 1.19542E-25 score: 93.5227
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 50..116
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 48..262
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 71..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15291-RA	Carg15291-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity