Carg15282 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATCACAAAATAATATTCTCATTTTTCCTCTCTTCATCACTGATTGTTCTTGTTGTTCTCCATCTTCCGCCATGGAAATGAGCTTTACCACCACTGTGTTCTTCATCTTCCTTCTGCTTACCCCTTCATTCTGTTGTTGTTCTTCATATGAAGGTGTGTGTGTAATTTGTGTATGATGGGTGTTACAGGAATATAATGGTTGATTCATTTGTTGATTTAATTTTAATTTGTAGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGATTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCACTCCCATGGAAGGCCATGGATTGTTCATCATCGCCATCCTCTCCACCCTCCTCCATACCCACTCAAGGTCATTTTCTTTTTCTTGTTTGTGACCATCAATATCAATCTTTTGGATTATCTAGCTAGAGTAAATAGTTCGATGTCCCTGGAGTGGGTAGGGTTATCTCTACCTCTTGTTTCGTTTCTTGTTCTCGTGAAAATTTTTATTTATTTTTATGAAAATTGAGATGGAGATCCTTCGGAATTCATTGATATGAAGATCCTCCATGTGAATTCCCGACCCGACCCTATTTAGCTCATGGAAAAAAGTCTCTTTCCGCTCCCTAAGATCCTCCATGTGAATTTTCGACCCGACCCTACTTGGCTCATGGAAAAAAGTCTCTTTACGCTTACTCTCCATTCCCCCTAAGTTTAGAGCGTTTTAATTGAAATAAACATCTCTAGCTTCAAGTATATATATATATATATTTTTACATAATTTTTATTTAAATTGTTTATATGTTTTTATTTTTCTTGCGTTTTAAAAAATAGCGTAGAAGTTCGTTTACTCCCAAGCATAAATAAAAGGGTTATTTTATTTCTATTTACTTCCATAATAAATATTTTTTTAAAAAAAATAAAATTTCCACATGTACGTGCAAAATTGGTACTTTTGAGAACAAAAGAGTAATAATAATAATGAAAAAAATAAAAATTGAGGTTTGTTTTGTTTTGTCCCACCCACCCATTAAATATTATTGGTGGGTGAAGAATTTGTTTGTTTTTAGTGTATTGGGTAATCATTTATTTATTTTTATTTATATTTTAGCACTTAGCTTACGAAAAACTTAACCAAACTTAGTCGTTGAATTATGCAAATCAATCATAAGCTGTAATCTTAGATTAATTTCTTTGATTTTTTTTTTTGTTAAATAAAATAAAGATAACTTATTTTATTTTATTTTATTTTATAGTTTCGTAATTATTCTGTTTATTTGTGCAGGGAAGCAAGGTGGGTGCATAATTGAAGATTTGGAAGCATTTATTTCAACGTTTACAAATAAAATCATATTTAGAACTTCAGATATAAATTTCATCATCTTTTTGAAGTATAGTTCTGTACAGAACATGACTGCATCAATCTTTTGTGTGTATGTTTGGGGTTTGTGCATTTTTAATTATACACAACATTAGTATTATTATT ATAATCACAAAATAATATTCTCATTTTTCCTCTCTTCATCACTGATTGTTCTTGTTGTTCTCCATCTTCCGCCATGGAAATGAGCTTTACCACCACTGTGTTCTTCATCTTCCTTCTGCTTACCCCTTCATTCTGTTGTTGTTCTTCATATGAAGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGATTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCACTCCCATGGAAGGCCATGGATTGTTCATCATCGCCATCCTCTCCACCCTCCTCCATACCCACTCAAGGGAAGCAAGGTGGGTGCATAATTGAAGATTTGGAAGCATTTATTTCAACGTTTACAAATAAAATCATATTTAGAACTTCAGATATAAATTTCATCATCTTTTTGAAGTATAGTTCTGTACAGAACATGACTGCATCAATCTTTTGTGTGTATGTTTGGGGTTTGTGCATTTTTAATTATACACAACATTAGTATTATTATT ATGGAAATGAGCTTTACCACCACTGTGTTCTTCATCTTCCTTCTGCTTACCCCTTCATTCTGTTGTTGTTCTTCATATGAAGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGATTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCACTCCCATGGAAGGCCATGGATTGTTCATCATCGCCATCCTCTCCACCCTCCTCCATACCCACTCAAGGGAAGCAAGGTGGGTGCATAA MEMSFTTTVFFIFLLLTPSFCCCSSYEGGSENGGMGSSSEVYEIDYRGPETHSSHISPPHHSHGRPWIVHHRHPLHPPPYPLKGSKVGA Homology
BLAST of Carg15282 vs. NCBI nr
Match: XP_022925989.1 (uncharacterized protein LOC111433241 [Cucurbita moschata] >KAG7034582.1 hypothetical protein SDJN02_04312 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 190.7 bits (483), Expect = 5.6e-45 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg15282 vs. NCBI nr
Match: KAG6604438.1 (hypothetical protein SDJN03_05047, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Carg15282 vs. NCBI nr
Match: XP_023543089.1 (uncharacterized protein LOC111803061 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173.7 bits (439), Expect = 7.1e-40 Identity = 82/89 (92.13%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Carg15282 vs. NCBI nr
Match: XP_022979166.1 (uncharacterized protein LOC111478885 [Cucurbita maxima]) HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39 Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
BLAST of Carg15282 vs. NCBI nr
Match: XP_038881428.1 (uncharacterized protein LOC120072958 [Benincasa hispida]) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-21 Identity = 65/101 (64.36%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of Carg15282 vs. ExPASy TrEMBL
Match: A0A6J1EDR4 (uncharacterized protein LOC111433241 OS=Cucurbita moschata OX=3662 GN=LOC111433241 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg15282 vs. ExPASy TrEMBL
Match: A0A6J1IQ06 (uncharacterized protein LOC111478885 OS=Cucurbita maxima OX=3661 GN=LOC111478885 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.9e-40 Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
BLAST of Carg15282 vs. ExPASy TrEMBL
Match: A0A6J1CPX6 (uncharacterized protein LOC111013652 OS=Momordica charantia OX=3673 GN=LOC111013652 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.3e-18 Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Carg15282 vs. ExPASy TrEMBL
Match: A0A5A7U1B9 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00720 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.0e-12 Identity = 52/85 (61.18%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of Carg15282 vs. ExPASy TrEMBL
Match: A0A0A0KIB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444970 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.4e-11 Identity = 51/83 (61.45%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of Carg15282 vs. TAIR 10
Match: AT5G03120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05 Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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