Carg15270 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15270
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CASP-like protein
Location	Carg_Chr03: 9032654 .. 9034924 (+)
RNA-Seq Expression	Carg15270
Synteny	Carg15270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTGAGCCGGCCTTCGGTGCATCCAGTTGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGGGCCGAGAGTTAGGATGAAGGATGTGCAGGGTATGCCTGGTACAACAGGTGGACTTGCACTTCGTCTCCTTCAGTTCATATTTGCTGCAGTTTCTCTGTGTGTTATGGCCACCACTAGTGATTTCCCTTCCGTCACGGCGTTTCGGTACGCAATTCTTCAATTTTTGTCCCATAGTGTCCGGCTCTGTGTAACTTTTCGATGTTTTGTTTGTGATAATCTCCACGTTACAGAATCAATGAGCTGAAACTAGGATGCTGGATAAGTTTAGATATATTTAGCGTGATTTCGACGTCGTTCAGAATATTTTATCCATTAAGAACGCGTGTTTTTTCGTCTTTTCTTGCCAATGATTCTGCTCAAGAACAGTTCTTTGGTAATTGTACTTCCTGTCCAATATTCTTAGGGATGGACCCTAACCTCTGTGGATGGTGATAGCAACAACTTGTATTACACTATCGCCGAGGTCTAGCGTTTTCAATGTGTTGTGAGTCGCGATATAGCCCTCGGGTACAGAGGGAAGTGGATATAGACATGTAGAAAAGTCGTCGCCTTAAATTTGAGCGTGTTCAACAAGAAGGAAATCAAGAGTCTTGTGTCGTTGAGTTTTTGTTTGAGGATTCGAGGGAGTTATTATTGTTAGTGCTGTATTATTTTCCCCACAGAGTGGATAAGAAAAACACTATTGAAATCACTATTTTCTTTCAGCAAATTGCTGTTGGTCGATTATTCAGCTCATGATCAAGTTCAAATTTTCGATGAAAATATTTTCTATACGTTTCATGTCAGTTCAAAAACACTGCTTGTGATCAAGAATTTTTCGTTGGTAATTTTCATCATTCTATTAATACCAACCGGAGTTTTTTGCAACCTTGGTTGGTTTTTGAAAGTTCGGAAGGTATCTCATTTTCTGCTCTAGCACTTTTCTTTAGGACACCGAAAACTGATTAGTTGTTTCTCTTACGAAGAAGTTTGTTCTGTTGGAGAATGTTATTCATGATCAAAACTTGTGATTTTTAGATATCTTGTATGTTTGAGCCATCAACTTTGTGTTCAATTGTTCATATGCAATTATAATGGTCTATCATTTATCTCAGATATCTTGTTGCTGCTGCTGGCTTGCAATGTTTGTGGAGCTTTTCATTGGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCAAAACTGCTCAATAGTTGGTTTATTCACCATTGGTGATGCGGTAAGCATAATTTGTATGCCAAACACACATATTAGATCTGCATGCATCTTATATTTGTAGTCTGATACGTGATGTGCAATCCAGGAGCTTGTTGAAGTCACACGGTTTTCATAAAATTCTGAGATTGACATCTAGTTTTTATTGGATACTATGGTTATGCTTGGTTTGCAAGAACGCAAAAATCAACAATGAGAAATGTGAATCCATGTGTAACAGTCCAAGCCCACCGCTAGTCGATATTGTCCTTTTTGGGTTTTTCCTTTTGGGCTTCCCTCCAATGTTTTCAAAACGCGTCTATTAGGGAGAGGTTTCCACACCTTTTATAAAAAATGTGTCGTTCTCCTCTCCAACTAATGTGAGATCTCACAATTTACCCCCTTCGAGGCCTAGCATCTTTGCTGGCACTCGTTCCTTTCTCCAATCGATATGGGATCTCACAATCCACCCCTTTGGGGTCCAGCGTCCTCACTAGTCTTCGTTCTTCTTTCCAATCGAAATGGAATCTCACTCGAAGAGGAACTTTTTGTTTGTTTAATTATTGGGTTTGCCTATTTGTGAGTTGTAATAGAAAAAGCATCCCAATGGAATGCTGAGTCTACCAATACGAAGGAATGAGCCTGATATGTTACTCTAACTCTTTGGTAATCATAATATAGTATGATATTGATTCTTATATTTGAATCAATTTGTTAAACCAATATAACTTTAGTTTATTCAATTTCTTAAGTTCAATTAGCAATTATAATCGTGGATATAGATAACGAACTGTGTCTTCCTGCAGATTACATCCACCCTTACATTTTCTGCTGCATGCTCATCAGCTGGGATTACTGTTCTCATAGGCAACGATCTTAACAAGTGTGGCGTGAACCACTGTGCGCAATTCGAGTCCGCTACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGA

mRNA sequence

ATGAACGTGAGCCGGCCTTCGGTGCATCCAGTTGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGGGCCGAGAGTTAGGATGAAGGATGTGCAGGGTATGCCTGGTACAACAGGTGGACTTGCACTTCGTCTCCTTCAGTTCATATTTGCTGCAGTTTCTCTGTGTGTTATGGCCACCACTAGTGATTTCCCTTCCGTCACGGCGTTTCGATATCTTGTTGCTGCTGCTGGCTTGCAATGTTTGTGGAGCTTTTCATTGGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCAAAACTGCTCAATAGTTGGTTTATTCACCATTGGTGATGCGATTACATCCACCCTTACATTTTCTGCTGCATGCTCATCAGCTGGGATTACTGTTCTCATAGGCAACGATCTTAACAAGTGTGGCGTGAACCACTGTGCGCAATTCGAGTCCGCTACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGA

Coding sequence (CDS)

ATGAACGTGAGCCGGCCTTCGGTGCATCCAGTTGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGGGCCGAGAGTTAGGATGAAGGATGTGCAGGGTATGCCTGGTACAACAGGTGGACTTGCACTTCGTCTCCTTCAGTTCATATTTGCTGCAGTTTCTCTGTGTGTTATGGCCACCACTAGTGATTTCCCTTCCGTCACGGCGTTTCGATATCTTGTTGCTGCTGCTGGCTTGCAATGTTTGTGGAGCTTTTCATTGGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCAAAACTGCTCAATAGTTGGTTTATTCACCATTGGTGATGCGATTACATCCACCCTTACATTTTCTGCTGCATGCTCATCAGCTGGGATTACTGTTCTCATAGGCAACGATCTTAACAAGTGTGGCGTGAACCACTGTGCGCAATTCGAGTCCGCTACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGA

Protein sequence

MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMATTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITSTLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR

Homology

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BLAST of Carg15270 vs. NCBI nr
Match: XP_022978910.1 (CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034570.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 8.5e-93
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. NCBI nr
Match: XP_023543053.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATA+AFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATALAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. NCBI nr
Match: XP_022926121.1 (CASP-like protein 5A2 [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. NCBI nr
Match: XP_038881202.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 3.9e-90
Identity = 173/179 (96.65%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGT GGLALRLLQFIFAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSL VVDAYALLVRRSL+NCSIVGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLGVVDAYALLVRRSLRNCSIVGLFTFGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. NCBI nr
Match: XP_004143253.1 (CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0047255.1 CASP-like protein 5A1 [Cucumis melo var. makuwa] >KGN48158.1 hypothetical protein Csa_003346 [Cucumis sativus] >TYK05890.1 CASP-like protein 5A1 [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 6.7e-90
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLAVVDAYALLVRRSL+NCSIVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVS  SVHPVE PP     V N PRVRM D++GMPGT  GLALR  QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSLQN  +V LF IGD +TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-63
Identity = 123/179 (68.72%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MN S P+VHPVEAPP     VH+ PRVRMKD QGMPGT GGLALRL QF FA V+  +M 
Sbjct: 1   MNPSHPAVHPVEAPPTD---VHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIML 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           +T DF +VTAF YLVAA  LQCLWS +LAV+D YALLV+RSL+N  +V LF +GD +T+T
Sbjct: 61  STDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTAT 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLIGNDL +C  NHC ++E+ATAMAF+SWF VSPSFLL FW LASR
Sbjct: 121 LTFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of Carg15270 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.0e-62
Identity = 128/179 (71.51%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPR-VRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVM 60
           M  SRP+VHPVEAPP  + A    PR V MKD+ GMPGT GGL LRL QF FAAV+L VM
Sbjct: 1   MFASRPAVHPVEAPPPPDPA--EQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVM 60

Query: 61  ATTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITS 120
           A+T+DFPSVT+F +LVAAA LQCLWSFSLA+VD YALLV+R L+N   V LF IGD IT+
Sbjct: 61  ASTNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITA 120

Query: 121 TLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
            LTFSAAC+S+GITVLI NDL+ C  NHCA FESATAMAF+SWFA+SPSFLLNFWS+AS
Sbjct: 121 ALTFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of Carg15270 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-61
Identity = 123/179 (68.72%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           M  SRP+VHPVEAPP T+  V     V MKD+ GMPGT GGL LR+ QF+FA V+L VMA
Sbjct: 1   MFASRPAVHPVEAPPPTD-PVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           +TSDFPSVTAF YLVAA  +QCLWSFSLA+VD YALLV+R L+N   V LF IGD IT+ 
Sbjct: 61  STSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAA 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF AACSSAGITVLI NDLN C  NHC  F++ATA+AF+SWFA++PSFLLNFWS+A+R
Sbjct: 121 LTFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of Carg15270 vs. ExPASy Swiss-Prot
Match: Q6NPF8 (CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-60
Identity = 127/180 (70.56%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPL--TEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCV 60
           MNVSRP++HPV+A P+  T GA+ + P VRMKDVQGMPGTTGGL LRL QF+ A +S+ V
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAI-DRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSV 61

Query: 61  MATTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAIT 120
           M TTSDF S TAF  LV A  LQ LWS SL ++DAYALLVRRSL+N S+V  FTIGD +T
Sbjct: 62  MVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVT 121

Query: 121 STLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           STLTF+AA +SAGITVLI NDL +C VNHC +FE+ATAMAFISWFAVSPSF+LNFWSLA+
Sbjct: 122 STLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Carg15270 vs. ExPASy TrEMBL
Match: A0A6J1IRK7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.1e-93
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy TrEMBL
Match: A0A6J1EDZ3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy TrEMBL
Match: A0A5A7U0S9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00210 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLAVVDAYALLVRRSL+NCSIVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy TrEMBL
Match: A0A0A0KF35 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLAVVDAYALLVRRSL+NCSIVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. ExPASy TrEMBL
Match: A0A1S3BLL2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLAVVDAYALLVRRSL+NCSIVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Carg15270 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 254.2 bits (648), Expect = 7.7e-68
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60
           MNVS  SVHPVE PP     V N PRVRM D++GMPGT  GLALR  QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSLQN  +V LF IGD +TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Carg15270 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 234.2 bits (596), Expect = 8.2e-62
Identity = 127/180 (70.56%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPL--TEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCV 60
           MNVSRP++HPV+A P+  T GA+ + P VRMKDVQGMPGTTGGL LRL QF+ A +S+ V
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAI-DRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSV 61

Query: 61  MATTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAIT 120
           M TTSDF S TAF  LV A  LQ LWS SL ++DAYALLVRRSL+N S+V  FTIGD +T
Sbjct: 62  MVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVT 121

Query: 121 STLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           STLTF+AA +SAGITVLI NDL +C VNHC +FE+ATAMAFISWFAVSPSF+LNFWSLA+
Sbjct: 122 STLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Carg15270 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 29  MKDVQGMPGTTGGLALRLLQFIFAAVSLCVMATTSDFPSVTAFRYLVAAAGLQCLWSFSL 88
           M D+ G PGT  GL LR+ Q +FAA S+  M T+  F S TAF YL+AA GLQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 89  AVVDAYALLVRRSLQNCSIVGLFTIGDAITSTLTFSAACSSAGITVLIGNDLNKCGVN-H 148
           A++D +AL+ +++L +  +V LF +GD +TSTL+ + A SSAGITVL   DL  C     
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 149 CAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           C +++ + A+AF+ W  ++ S L   W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Carg15270 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-29
Identity = 69/153 (45.10%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 29  MKDVQGMPGTTGGLALRLLQFIFAAVSLCVMATTSDFPSVTAFRYLVAAAGLQCLWSFSL 88
           MK + G PGT  GL LR+ Q   AA S+ VM +  +F   TAF YL+A+ GLQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 89  AVVDAYALLVRRSLQNCSIVGLFTIGDAITSTLTFSAACSSAGITVLIGNDLNKCGVNH- 148
           A +D YAL  ++ LQN  +V LF +GD +T+ L+ +AACSSAG+ VL   D+  C     
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 149 --CAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
             C ++E A A++F++W  ++ S  + FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Carg15270 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-26
Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 0


Query: 29  MKDVQGMPGTTGGLALRLLQFIFAAVSLCVMATTSDFPSVTAFRYLVAAAGLQCLWSFSL 88
           MK + G PGT  GL LRL Q   AA S+ VM ++ DF + TAF +LVA+ GLQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 89  AVVDAYALLVRRSLQNCSIVGLFTIGDAITSTLTFSAACSSAGITVLIGNDLNKCGVN-- 148
           A +D YA+  +  L++  ++ LFT+GD +T+ L  +AACSSAG+TVL   D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 149 -HCAQFESATAMAFISWFAVSPSFLLNFWSL 177
             C +F+ +  ++F +WF  + S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of Carg15270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978910.1	8.5e-93	100.00	CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, pa...	[more]
XP_023543053.1	1.9e-92	99.44	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo]	[more]
XP_022926121.1	2.5e-92	99.44	CASP-like protein 5A2 [Cucurbita moschata]	[more]
XP_038881202.1	3.9e-90	96.65	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_004143253.1	6.7e-90	95.53	CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like pro...	[more]

BLAST of Carg15270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	1.1e-66	71.51	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
P0DI70	1.5e-63	68.72	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
Q10Q78	8.0e-62	71.51	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	1.4e-61	68.72	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
Q6NPF8	1.2e-60	70.56	CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1	[more]

BLAST of Carg15270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRK7	4.1e-93	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1	[more]
A0A6J1EDZ3	1.2e-92	99.44	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1	[more]
A0A5A7U0S9	3.3e-90	95.53	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00...	[more]
A0A0A0KF35	3.3e-90	95.53	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1	[more]
A0A1S3BLL2	3.3e-90	95.53	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1	[more]

BLAST of Carg15270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	7.7e-68	71.51	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	8.2e-62	70.56	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	2.2e-30	46.36	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	4.1e-29	45.10	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	7.3e-26	43.05	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 36..164 e-value: 9.1E-26 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 17..179
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 17..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15270-RA	Carg15270-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane