Carg15268 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15268
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF803)
Location	Carg_Chr09: 7741587 .. 7743823 (-)
RNA-Seq Expression	Carg15268
Synteny	Carg15268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACCCAAAACTTGTAAGCCAGTGCTAATTTTGAATAATGTAAATTGATGGCTTAGGCTTTGGACACATTTGACACTGCGGTTGTTTCGCCCATTCATTATGCAATGTTCACATCTTTCACCATCTTCGCCAGTGTCATAATGTTCAAGGTATTTTTTCTAGAATTTAAACAATTTTGTTTGGTCTTGCAGAGACTGATTTGTATATATACTTGTATAATTAGGATTGGTCTGGTCAGAGTGCTAGCAGCATTGCATCAGAACTCTGTGGATTTGTAACCATACTTTCCGGGACCGTCGTCTTGCACGATACAAGATCGCCCGATCCTGCCTCTGTTTCAGGTATCTGTTTTCGTCGAAGATTATTGATTTTCTGTTCCTTTCTCTGCTGTTACGTTTATTTTTTGTTTGCTCTAAACGATACACGAACACATGCTTCTATCATTGTAGTAAAAATTGAATATGCTTACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCCTCAAAGTTTTAAAACGTGTCTGCTAGGGAGAGATTTCTATACCCGTTCTCCTCACCAACCGATGGGATCTCACAATAAGATTGGTAACAATTAATGAATCAATGACACTTTAGTTTGGGTTGAATATACGTTCTACACGTATATTGGACATGAGTAGGACACGTCTTTAGCACAATACATATTTTTTGAACATTTGTTAAGCAATAGACACAGAGTATGGGTGTCGTATGTCACAATTGTGCTCTTATGAGATGTTTGTAAGTGATTGTGCGGTACTCACTCTCACCATTGAGTGAGTCAGCCAACTCGAAATCGTGTTACCTTTGGTCGAACGACGTGTACCCAAGGCCCCCCTTTTAGTAGATCCGGCTCTACCCAAACTTTTCTGGTGAGCAATTTTTGGATAACAAACATACCTCCCCATAAGGTAATTTTAATGTGGCCAATTTTCCTTCTTTTGCAATCAGTTTCGCTACAGTGCTCTAGCTAATTGTCCCCCTTTTTCGAGTGTGATTTCTATGTTATGTATGGTCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTTTAATCAATCAAAACCCCTTCTCAAATTGTACAAGCTTCTTCCGAAGCATACGGCTTTCTGGATGTAGATGATGATATCTATACATATGGATCTTATATATATTGTCCAATGAAGTACCACATGAGTGAATATACAGGAATCCAAATCCGCCGAATCACTCATGTTATGATCTTCTACATCCTAGATCTTCCCGTTCCTTCATCTGACTTATGTTCTTCATGTAGCATTTAGACCGAAGGTTTTAGAAAATGGGGATTGAGAGAGAATTTAGAAATAGAGTTTGAAAGCATGATTGAGAGAAATGAAAAAACTAATGTTATAGGCTATAAGTGGAAAATGCAACACAACGGCTTAGATAGCATACAACTCTCGGTAGGAAAAATTGACGACTAGTCGCATATTCCTATAGTACATTCTAAGGCATTTCAGGTCTACCAAGCGTACACATGATTCTGCGGAAACGTCATACACTTAGAAAATACAATAAAGAAACTATATATCATCATGAAATCTCCGTATTCTTAAATGCATAAACTAACAGATTTCTCTGCATATTTCTTTTTGACAATTTCGACAGAGATGTACATGTCTGTCTCGCCTCAAGTGTCGTGGTATTTCCCCGCAAATGGCGATACCTGGAAACGACAATCCGAAGAAATGCTATTGCCAGATTTTGATGCAATCCTCAAACAAGACCATTTCACATGAGATCAAAGGTAATTCATGCACATTACTTACTAATGCATCTCCACTGCAACACCAAACAAATGCAACTAAATTTTGGGAGAAATCTGCATATATAGTTAGTTTAATGCGTTATTTGGTAGAACGGTTTCAGCGGAGTTTCGTTTTCTTTCTCCGCTCGGCCGTTCGAGATTGAAGAACGAGTAGGGCTTGTGGGACGTAGTATGTACTTTGTAACTATTCATTTTGTTCCTAAGAATTGAAACACAGCTTCTTCCCATCCCTTTTCACCTTTAGGTCTCTAACACCTCCCTCTCTCTTAACATTATTTTGTAAAGTAGAACAGATCTTGTGGATCAAAAATGTAATCTGCTTTGTTTTGTGTGTATTCTTTTTATTCACTCATTCTCTTAGCCATGGAAATGTGAGATATTTGATGCTAAAATGTCACGGCCCAAGCTCACCGCTGGTAGATATT

mRNA sequence

AACACCCAAAACTTGTAAGCCAGTGCTAATTTTGAATAATGTAAATTGATGGCTTAGGCTTTGGACACATTTGACACTGCGGTTGTTTCGCCCATTCATTATGCAATGTTCACATCTTTCACCATCTTCGCCAGTGTCATAATGTTCAAGGATTGGTCTGGTCAGAGTGCTAGCAGCATTGCATCAGAACTCTGTGGATTTGTAACCATACTTTCCGGGACCGTCGTCTTGCACGATACAAGATCGCCCGATCCTGCCTCTGTTTCAGAGATGTACATGTCTGTCTCGCCTCAAGTGTCGTGGTATTTCCCCGCAAATGGCGATACCTGGAAACGACAATCCGAAGAAATGCTATTGCCAGATTTTGATGCAATCCTCAAACAAGACCATTTCACATGAGATCAAAGGTAATTCATGCACATTACTTACTAATGCATCTCCACTGCAACACCAAACAAATGCAACTAAATTTTGGGAGAAATCTGCATATATAGTTAGTTTAATGCGTTATTTGGTAGAACGGTTTCAGCGGAGTTTCGTTTTCTTTCTCCGCTCGGCCGTTCGAGATTGAAGAACGAGTAGGGCTTGTGGGACGTAGTATGTACTTTGTAACTATTCATTTTGTTCCTAAGAATTGAAACACAGCTTCTTCCCATCCCTTTTCACCTTTAGGTCTCTAACACCTCCCTCTCTCTTAACATTATTTTGTAAAGTAGAACAGATCTTGTGGATCAAAAATGTAATCTGCTTTGTTTTGTGTGTATTCTTTTTATTCACTCATTCTCTTAGCCATGGAAATGTGAGATATTTGATGCTAAAATGTCACGGCCCAAGCTCACCGCTGGTAGATATT

Coding sequence (CDS)

ATGTTCACATCTTTCACCATCTTCGCCAGTGTCATAATGTTCAAGGATTGGTCTGGTCAGAGTGCTAGCAGCATTGCATCAGAACTCTGTGGATTTGTAACCATACTTTCCGGGACCGTCGTCTTGCACGATACAAGATCGCCCGATCCTGCCTCTGTTTCAGAGATGTACATGTCTGTCTCGCCTCAAGTGTCGTGGTATTTCCCCGCAAATGGCGATACCTGGAAACGACAATCCGAAGAAATGCTATTGCCAGATTTTGATGCAATCCTCAAACAAGACCATTTCACATGA

Protein sequence

MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSVSPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT

Homology

[Close]

BLAST of Carg15268 vs. NCBI nr
Match: KAG7025092.1 (putative magnesium transporter NIPA6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
          MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 1  MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60

Query: 61 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
          SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 61 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 97

[Close]

BLAST of Carg15268 vs. NCBI nr
Match: KAG6592246.1 (putative magnesium transporter NIPA6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 257 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 316

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 317 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 353

[Close]

BLAST of Carg15268 vs. NCBI nr
Match: XP_022932550.1 (probable magnesium transporter NIPA6 [Cucurbita moschata] >XP_023536265.1 probable magnesium transporter NIPA6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 257 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 316

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 317 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 353

[Close]

BLAST of Carg15268 vs. NCBI nr
Match: XP_022976923.1 (probable magnesium transporter NIPA6 [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 337 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 396

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 397 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 433

[Close]

BLAST of Carg15268 vs. NCBI nr
Match: XP_038897340.1 (probable magnesium transporter NIPA6 isoform X1 [Benincasa hispida] >XP_038897341.1 probable magnesium transporter NIPA6 isoform X1 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 273 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 332

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKR+SEE+LLPDFDAILKQDHFT
Sbjct: 333 SPQVSWYFPANGDTWKRKSEEILLPDFDAILKQDHFT 369

[Close]

BLAST of Carg15268 vs. ExPASy Swiss-Prot
Match: Q8GWX2 (Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g21120 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.8e-15
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFT+ TI AS IMFKDWSGQ A+S+ASELCGF+T+L+GT++LH TR        E   + 
Sbjct: 249 MFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTRE------EEQQQAS 308

Query: 61  SPQVSWYFPANGDTWKRQSEEMLL 85
           S  V WY     D+ K  +EE L+
Sbjct: 309 SEHVRWY-----DSRKSMNEEHLV 321

[Close]

BLAST of Carg15268 vs. ExPASy Swiss-Prot
Match: Q8GYS1 (Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana OX=3702 GN=At4g38730 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEM 57
           MFT+ TI AS IMFKDW+GQ+  SIASE+CGF+T+L+GTV+LH TR  + AS   M
Sbjct: 249 MFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQASPRRM 304

[Close]

BLAST of Carg15268 vs. ExPASy Swiss-Prot
Match: B3LFA3 (Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g13800 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.2e-12
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFT+FTI AS+IMFKDW+ QS   IA+ELCGFVTILSGT +LH T+    ++      S 
Sbjct: 252 MFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNSTSLRGSTSH 311

Query: 61  SPQVSWYFPANGDT 75
           SP+ +  F  +G +
Sbjct: 312 SPRDTPVFINSGSS 325

[Close]

BLAST of Carg15268 vs. ExPASy Swiss-Prot
Match: Q9LIR9 (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTR 47
           MFT+FTI AS+IMFKDW+ QS   IA+ELCGFVTILSGT +LH T+
Sbjct: 252 MFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTK 297

[Close]

BLAST of Carg15268 vs. ExPASy Swiss-Prot
Match: F4JKQ7 (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDT 46
           MFTS TI ASVIMFKDW  QS + I +ELCGFVTILSGT +LH T
Sbjct: 263 MFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTT 307

[Close]

BLAST of Carg15268 vs. ExPASy TrEMBL
Match: A0A6J1INJ5 (Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111477149 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 337 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 396

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 397 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 433

[Close]

BLAST of Carg15268 vs. ExPASy TrEMBL
Match: A0A6J1F2H7 (Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111439042 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV
Sbjct: 257 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 316

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT
Sbjct: 317 SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 353

[Close]

BLAST of Carg15268 vs. ExPASy TrEMBL
Match: A0A1S3CF57 (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103500043 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPD ASVSEMYMSV
Sbjct: 257 MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDSASVSEMYMSV 316

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKR+SEE+LLPDFDAILKQDHFT
Sbjct: 317 SPQVSWYFPANGDTWKRKSEEILLPDFDAILKQDHFT 353

[Close]

BLAST of Carg15268 vs. ExPASy TrEMBL
Match: A0A0A0K4P7 (Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_7G291140 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.9e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFTSFTIFASVIMFKDWSGQSASSIASELCGF+TILSGTVVLHDTRS DPASVSEMYMSV
Sbjct: 257 MFTSFTIFASVIMFKDWSGQSASSIASELCGFITILSGTVVLHDTRSSDPASVSEMYMSV 316

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYFPANGDTWKR+SEE+LLPDFDAILKQDHFT
Sbjct: 317 SPQVSWYFPANGDTWKRKSEEILLPDFDAILKQDHFT 353

[Close]

BLAST of Carg15268 vs. ExPASy TrEMBL
Match: A0A6J1DPZ1 (Probable magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111023245 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFT+FTIFASVIMFKDWSGQSASSI SELCGFVTILSGT+VLHDTRS +PASVSEMYM V
Sbjct: 258 MFTTFTIFASVIMFKDWSGQSASSIVSELCGFVTILSGTLVLHDTRSANPASVSEMYMPV 317

Query: 61  SPQVSWYFPANGDTWKRQSEEMLLPDFDAILKQDHFT 98
           SPQVSWYF ANGDTWKR+SEE+LLPDFDAILKQDHFT
Sbjct: 318 SPQVSWYFHANGDTWKRKSEEILLPDFDAILKQDHFT 354

[Close]

BLAST of Carg15268 vs. TAIR 10
Match: AT2G21120.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-16
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFT+ TI AS IMFKDWSGQ A+S+ASELCGF+T+L+GT++LH TR        E   + 
Sbjct: 249 MFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTRE------EEQQQAS 308

Query: 61  SPQVSWYFPANGDTWKRQSEEMLL 85
           S  V WY     D+ K  +EE L+
Sbjct: 309 SEHVRWY-----DSRKSMNEEHLV 321

[Close]

BLAST of Carg15268 vs. TAIR 10
Match: AT4G38730.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 77.0 bits (188), Expect = 9.1e-15
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEM 57
           MFT+ TI AS IMFKDW+GQ+  SIASE+CGF+T+L+GTV+LH TR  + AS   M
Sbjct: 249 MFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQASPRRM 304

[Close]

BLAST of Carg15268 vs. TAIR 10
Match: AT4G13800.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTRSPDPASVSEMYMSV 60
           MFT+FTI AS+IMFKDW+ QS   IA+ELCGFVTILSGT +LH T+    ++      S 
Sbjct: 252 MFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNSTSLRGSTSH 311

Query: 61  SPQVSWYFPANGDT 75
           SP+ +  F  +G +
Sbjct: 312 SPRDTPVFINSGSS 325

[Close]

BLAST of Carg15268 vs. TAIR 10
Match: AT3G23870.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDTR 47
           MFT+FTI AS+IMFKDW+ QS   IA+ELCGFVTILSGT +LH T+
Sbjct: 252 MFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTK 297

[Close]

BLAST of Carg15268 vs. TAIR 10
Match: AT4G09640.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 67.0 bits (162), Expect = 9.5e-12
Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0


Query: 1   MFTSFTIFASVIMFKDWSGQSASSIASELCGFVTILSGTVVLHDT 46
           MFTS TI ASVIMFKDW  QS + I +ELCGFVTILSGT +LH T
Sbjct: 263 MFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTT 307

The following BLAST results are available for this feature:

BLAST of Carg15268 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025092.1	1.3e-47	100.00	putative magnesium transporter NIPA6 [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6592246.1	1.3e-47	100.00	putative magnesium transporter NIPA6, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022932550.1	1.3e-47	100.00	probable magnesium transporter NIPA6 [Cucurbita moschata] >XP_023536265.1 probab...	[more]
XP_022976923.1	1.3e-47	100.00	probable magnesium transporter NIPA6 [Cucurbita maxima]	[more]
XP_038897340.1	1.1e-46	97.94	probable magnesium transporter NIPA6 isoform X1 [Benincasa hispida] >XP_03889734...	[more]

BLAST of Carg15268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWX2	6.8e-15	51.19	Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g2112...	[more]
Q8GYS1	1.3e-13	62.50	Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana OX=3702 GN=At4g3873...	[more]
B3LFA3	9.2e-12	51.35	Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g1380...	[more]
Q9LIR9	2.1e-11	71.74	Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g2387...	[more]
F4JKQ7	1.3e-10	73.33	Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g0964...	[more]

BLAST of Carg15268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INJ5	6.3e-48	100.00	Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111477149 PE=3 ...	[more]
A0A6J1F2H7	6.3e-48	100.00	Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111439042 PE=...	[more]
A0A1S3CF57	4.5e-46	96.91	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103500043 PE=3 SV=1	[more]
A0A0A0K4P7	5.9e-46	95.88	Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_7G291140 PE=3 S...	[more]
A0A6J1DPZ1	1.0e-42	90.72	Probable magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111023245 PE...	[more]

BLAST of Carg15268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21120.1	4.8e-16	51.19	Protein of unknown function (DUF803)	[more]
AT4G38730.1	9.1e-15	62.50	Protein of unknown function (DUF803)	[more]
AT4G13800.1	6.5e-13	51.35	Protein of unknown function (DUF803)	[more]
AT3G23870.1	1.5e-12	71.74	Protein of unknown function (DUF803)	[more]
AT4G09640.1	9.5e-12	73.33	Protein of unknown function (DUF803)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008521	Magnesium transporter NIPA	PFAM	PF05653	Mg_trans_NIPA	coord: 1..46 e-value: 1.4E-13 score: 50.7
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 1..96
None	No IPR available	PANTHER	PTHR12570:SF74	MAGNESIUM TRANSPORTER-RELATED	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15268-RA	Carg15268-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903830	magnesium ion transmembrane transport
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0005769	early endosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity