Carg15209 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15209
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein 230
Location	Carg_Chr10: 1693045 .. 1693985 (-)
RNA-Seq Expression	Carg15209
Synteny	Carg15209

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTCCTCCTCACTCCACCTTGCTCGTAGTCAAAAACAGCCAGAGAGCTTTCTCTTCGCTTCTAAAATCAAAAGTCCACCGTCGTCTCCTCCGCCGCTGTCTTCCCCAAATCCGATACTCTTTCTCTGCATATCGAAGCTTCAACGCCTTCTTCTTTTTCCAGCTCTTGATCTCCGGTATTACAGAGAAAAATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTTTTCGCCTTCCTTTTGTTTTTCTTCTTGATTTTGCCCTAGTTCGAATGAAAATTTATGGTTCATTCTCGAAAATTTCCAGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAAATGCTCCAAGTTCCTAACCATTTCTCTACATTTGTACAGATTTTCTTCTCCAGATTTCTTCATTGTCTACGTTGATTCCACCTTCCCGTTTCCCTTTGACTATTCATTACTCTGTATCCGTTTACTGTCGTTGTCGTTGATAGTTCTTCTGTTTCTTAAGGCCTATATGTATATAAATTGTTAATTTCAGATCACAATCGAAGCATTTATCTATATAATCTGAAATTTCGCTAATTTTTGCATTTGTTTGTTGATTTGAACACATTGCGAGTTTATCATGTGAAGAACACAAAGAATTAAATTAGCTTTCCAAATTCTTCAAGTCTCTTGAGGAATTATCTAGCTCTAG

mRNA sequence

GCCTTCCTCCTCACTCCACCTTGCTCGTAGTCAAAAACAGCCAGAGAGCTTTCTCTTCGCTTCTAAAATCAAAAGTCCACCGTCGTCTCCTCCGCCGCTGTCTTCCCCAAATCCGATACTCTTTCTCTGCATATCGAAGCTTCAACGCCTTCTTCTTTTTCCAGCTCTTGATCTCCGGTATTACAGAGAAAAATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAAATGCTCCAAGTTCCTAACCATTTCTCTACATTTGTACAGATTTTCTTCTCCAGATTTCTTCATTGTCTACGTTGATTCCACCTTCCCGTTTCCCTTTGACTATTCATTACTCTGTATCCGTTTACTGTCGTTGTCGTTGATAGTTCTTCTGTTTCTTAAGGCCTATATGTATATAAATTGTTAATTTCAGATCACAATCGAAGCATTTATCTATATAATCTGAAATTTCGCTAATTTTTGCATTTGTTTGTTGATTTGAACACATTGCGAGTTTATCATGTGAAGAACACAAAGAATTAAATTAGCTTTCCAAATTCTTCAAGTCTCTTGAGGAATTATCTAGCTCTAG

Coding sequence (CDS)

ATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA

Protein sequence

MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV

Homology

[Close]

BLAST of Carg15209 vs. NCBI nr
Match: KAG6589675.1 (Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023355.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. NCBI nr
Match: XP_022987351.1 (transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 4.3e-49
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. NCBI nr
Match: XP_022921334.1 (transmembrane protein 230-like [Cucurbita moschata])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. NCBI nr
Match: XP_023516626.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIAL+VSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALSVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.4e-47
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Carg15209 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Carg15209 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Carg15209 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Carg15209 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Carg15209 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.1e-49
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. ExPASy TrEMBL
Match: A0A6J1E055 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111429638 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGSYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-43
Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI++++ + VNN+PP+KEIALAV+LLVFG +GIV G FMA NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Carg15209 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 164.9 bits (416), Expect = 3.5e-41
Identity = 78/103 (75.73%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI+DED+++ + + V+N+PP+KEI+LAV LLVFG +GIV+G FMA NRVGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

[Close]

BLAST of Carg15209 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 63.9 bits (154), Expect = 8.5e-11
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYY 87
           P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRIAYY
Sbjct: 46  PWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYY 105

Query: 88  AYKGYKGFSFSNIP 102
           +++G +G+ F+ IP
Sbjct: 106 SWRGAEGYRFAAIP 119

The following BLAST results are available for this feature:

BLAST of Carg15209 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589675.1	1.5e-49	100.00	Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022987351.1	4.3e-49	99.03	transmembrane protein 230-like [Cucurbita maxima]	[more]
XP_022921334.1	1.3e-48	99.03	transmembrane protein 230-like [Cucurbita moschata]	[more]
XP_023516626.1	2.8e-48	98.06	transmembrane protein 230-like [Cucurbita pepo subsp. pepo]	[more]
XP_038879685.1	2.4e-47	96.12	transmembrane protein 230 [Benincasa hispida]	[more]

BLAST of Carg15209 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	1.1e-10	48.05	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q5R8X3	1.1e-10	46.75	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	1.8e-10	46.75	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q8CIB6	1.8e-10	46.75	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q5BJP5	1.8e-10	46.75	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]

BLAST of Carg15209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDX9	2.1e-49	99.03	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1	[more]
A0A6J1E055	6.1e-49	99.03	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111429638 PE=3 SV=...	[more]
A0A1S3BWL2	4.4e-47	94.17	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1	[more]
A0A0A0LUC1	1.3e-46	93.20	Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1	[more]
A0A6J1I4W8	2.2e-46	93.20	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1	[more]

BLAST of Carg15209 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29850.1	2.9e-43	79.61	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	3.5e-41	75.73	Eukaryotic protein of unknown function (DUF872)	[more]
AT3G29170.1	8.5e-11	44.59	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 29..101 e-value: 4.8E-17 score: 62.2
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR15664:SF18	TRANSMEMBRANE PROTEIN 230-LIKE	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15209-RA	Carg15209-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane