Carg15208 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15208
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glutaredoxin-C4-like
Location	Carg_Chr10: 1685417 .. 1690991 (-)
RNA-Seq Expression	Carg15208
Synteny	Carg15208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATATCTTACAAGACGTGTGAATATACAAGAGATGCTGAATTTCAGTAATTGTCTTCTCTAAAATTACGCTTACGAGCAATTAATCGCCAATCGCAGAAACCTCACTGGAATAAGGTTAATTGCAGGCCGGAATTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCGTAATTTCCTTCTCATTCCACTTTTCTCTTCTTAATCGATTTATTCAGACTCCATTGTGGATCTATTCGTCTCATTTCTCCAAATCGACTTTTGTTGTTCGGTTCTTGACCCGCTGTGGCCATGTTTTCTATTACTTTAAATTTTGTTGCCCTACATTTGGAAGCAGATCGAGGAAGGGGCGAGTTTCCGATTCTTTTAATTGTTGTTTTTGTGCATACAGATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGGTACTTGCATAATCTGCCTTTTTCTCGTTCTTTTTTTATCAAAAGTAGCAATATCACGATGGCTTAAATCTGATTGAAACTCAGTATGTTTGTTTCTTGTTTTTGTGCTCCTTTTATTGCACGTCTTCTGTTGTTGCCCTGCCAGTATATCTAGATTTCGGACAATTTCATATGAAAATCTTGTTCTGGCCTATGCTCTCCGCATTATGAAAGTATTGGTTGGGATATTACACTTGATATGGGCATGCTTGATATCTAGATTTCGGAAAACTTAATATGAAAATCTTCTCTTACATCTTTTCTGATGATTTTGTCATCATTAATTTAAATGAACGATCTTTTCAACTTAATTGTGACGGAGTAGTAAGAGAATTTGTGCTTAGTATTGCCTCCAGCCTCTCGAAATGGTGACTGCCTGCGACTGGAATATTTATGTATTAGGTCTTGTGACATGATTCTCTGTAAAATGCTTTCCTCTTCGAAACTAACATGGTCGTTTGAGATCGTCTATTCTCTTCATCTAAAATCCTCACTCTGGCTGAACATATGGCAACTGGTTTAGGCATATACTCTTGACTACGCAGTGAGAGGTTCGAATCCCCCCCCCATAGACGTGGTTGAACTAAAAAATGTTCAAATTACTCTATCTAATCAGATCACACACTCAGATCCACCCCCCAAACAACAATGGAAGGTAATTCCTTCTAGTTGTGTTCTTTTGGGAGTTAAGAGAGGGAGGGAAAAGAGTGGGGGATGGTAGAAAACAGCAATGAAAGGGAGAAACGGTGTGCAAGAGTGAGTCCTATTAGCTGTTGCCTGAAATGTCCATTTACTGACAAAACGTTTAGATTATGGGTCGACTAATTATGTATTATGTTGTACAAAATCCTCTTATTTTTATCTTTTTAGTTGATTTGCAGGTTCTTTGTAATGTTTTTTTCTCTCTTGTTTCCCTTTTCGACATGGGTGGGGAGAATTCAAGCTTTGGATGAATTCTCTAAACGAACTAGCAAAAGGGTTATCAGTAAACATATATCTGGCTTTTGTTTCTGCATCTATGTATATCTGGTGGTGTTCCTTCATCTAAAGGTTAATAATACTCATAGAATTTGGATCTGTATCTCACAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGGTAATGGGCTCTTCTATGGCAAATTTTTGTGTGGTAACATATTTCTCCAAGTACTTCTAACTTATTGAAACCCTGATTCCAGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTAGGCATTAATGAAGAGCATAAAGCGGATCTTTGAATCAAACCCTGCTACTGTAAGCAGAGACATTTGCACCAACAGAGTATATTTTGCTTGGATCACTTGTTCAATTGTAACTCTTAATGGTGGAGGATAAGTTTTCTCTGTAACTCTCTCTCTCTGTCACACACCAGTGATAACAATGCTTTTCTTGCAAGGAGATTTTCGAACTTCAATAGATCGAACCATTTTTGCGCGTCTAGTTACGCTTGTTTAACTGGATCATGTAGGTTTCTTCATTTTCTAGACTGAGTCTTAAAATTTTATATTTGATGTTGTTGTCACGGTCCAAGTCTACTACTAGTAGATATTGTTGTCTTCGGGCTAAAACTCTAGAGAGAGGTTATCAAGAATGTTTTGTTCTTCCCCCCGATCGATATTGAGATCTTGAGTGAGGTTAGTTGAGAGGTGAATATGTTTCGTTCTCCTTTCTAATTGATAACCGATGTGGGATCTCACAATCATGTTGGTTGAGAGCGAGTATTTGAACTTTCTCACATTCTTGGTTGAGAGCGAGCATTTGAACTTTCTCACATTCTTGTGATGATATAACATTCTTGTGACGATATATGGCTATCAGGTTGAACTACCTACATTTTACCATTATTATATAACCATTTTTTATTATATTTTCTAAAAAACAAGTTTAATATCAATTTAATTAGAATATCCACATTTTAAATATTTTTAAATCTGAACCTGAAAATAATAATAAAATTAAAATTTTGTAATATTGATATTTGTTCTTTCAACTTTAATTTTTTTTTTTTTTTGTCTAATATGTTTTTCATCCTCAATATATTAATTTTTTTTTTTAATTTAATTGATTTATGGATGCAAAATTGAATACATCTGGTTTTGATTTGTTTTTTTTTTTTTTTTAGTTTTATTTATTTTTCAGTATTATTATTATCCAAAAATTCCAATTCAGCATAATTCAAGGAACATAAATAAATTTAAAAAAGGAAGGCCAGCAGTTAATTTGGCTGAAGTACAAACTTAATCGCCGACATTTGCAGTCTTATCGACAAAAGTTGGTTGCAGAGTTGCAGTCGGGAATTTGTATCCATGGCAGCGACGTTGAGTATGAGGATGACGACGATGGTATCAGCAGCCAGGGTTTATGCAATGGCTTCATCTTCCCCGGAGTCGCTCTTCGTCAAGAAAACCATCGCCTCCCACCAGTCCGTCATTTTCTCCAAATCCTATTGCCCGTATTGTCGTTCTCCTTCTTCTCTTCTTTCATTTTTTCTCGCTTCCAGCATCGATCTATTGTTAATCTCATTTCTGCTATTCGACTTTCGTTGTTCTATGTTAACCCGCGGCGGTCATGTGCAACTACTTTAATATTGTTTTTGATTGTGCGATGCAGGTATTGTGAAACGGCAAAAGCTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGCTGGATCAACGGGGTACTTGCTTAATTTCCCTTCTTCTAGCTCTCTCCCTGTTTATGATTAAGTAACATTAACAATTCTCATATGTAAATACTGCTGAATTTGGGTTAAATCTAATTGAAATTGAGTATGTTTGGTTCCTGCTTTTGAGATTCTTCATCTATTTCATGTCTTTGGTTCTGGATCCTGCTAGTTTGTTTAGATTCCAGAAATTTTATATTAAAATCATGTTCTGGCTTGTTCACTCCTGCTATGAAAATGTTGGATTGCGATATCACAGTTGATATTTTTGAAGCTCCAAGTGTTAACTAGATGGCTTACCTTTCTCTTTAGTCATCTATTTTCTTCATCTGCTTATCTTCTGCTTCCATTTTGTTCTTTCCTGATTAATCGTCGCTATTCAAACCTTAGTGTAACACTTAGAAAGAGAATCTGTGCTTAGCATTGCCTCCAACCTCTCTAAACGATGATTACCTGCGACTGCAAAATTTATGTATCTGGTTCTGTGACATAATGCTTTGCCAATTCGAAATTGAAGGTTTTGTTTGGGGAAATTCTACCTCTTCGGCTACAGTTTTCAGTCTCTAAGTGTGTTCTTGAAAGGGTAGTTCCTTCTGCTTTATGTGTTATTTTGAGAGTTTAGGAGAGGGGGCCAAAGAGTGGGAGATGGTAGAGGAAAAGGAGAAAAACTAGGGAGAAAGGGTATGCAGAAGTATGTCTGATTAATGTTGTTTGGAATTTTTTGTTTGCGAGAAAAGAAGTTCAAAAAAATGCTTGGGATTTATCTTGGTTTGTGTGTTCTTCACGATCTTCTTTCATCTTTCTCAGTTTGTATGCAAGTTGTTTGTCTTGTTCTATATTGGCTAACTAAAAGGAAAAATTATGGGTTAGTAAGTAAATGATACTATCTCCGTTGGTACGAGACATTTTGAGAAAAACCAAAAGTAAAGTCATGAGAGTTATGCTCAAAGTGGATAATATTATATCATTGTGGAGAGTCGTTGTTTCTAATATGGTATCAGAGTCATACCCTTAACCTAGCAATGTCAATAGAACCCTCAAGTGCCGAATAAAGAGTGTATTTTGTTCGAGAGCTCCAGAGAATGAGTCGAGTCTTGATTAAGGAGAGGTTGTTAGAGAGCTCTAGAGAAAGAGACCTCAAGAGGGGCTCTATAGAGTTCTTTGTTCGAAAGGAGGATTGTTGAAAATTGTCCCACATTGACTAATTAATTAAGGGGAAGATCATGAGTTTATAAATAAATGACGGGAAAAACCAAAAGCAAAGCCATGAGAGATTATGCTCGAAGTGGACAATACCATATCATCGTGAAATGTCTTCTTTCCTACCGTTATTGAGTTTAGCTTTTTTATTTCTTTCATTTCATTATGGGGGAGAGAATTCAAGCTTTGGATGAATTCCCTAAATAGACCGGCAAAACTGTTATACCATTAAACATATATCTAACTCTTCTCTTGTTTCCGTTTCTGTTCATATATCCTACTGCTATCTCCTTGCTGTTCAATTACTCATAACCTAGAAGTAACTACTTACTTCATAGCATTTGGATCTTTGTCCCCCAGATGATGGCAGTGCCATTCAAGATGCTCTTAGTGCACTTGTTGGAAGACGCACTGTTCCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGGTAATCGACTCTTCATTGCGCCAACATATTCTTTGTAATATACTCTTCTCCAAAGTGCTTTTAACTGATTGATGCCTTGAATTTCAGATACTGTTGAAGCTTATGAGAGCGGAGAGTTGGGTAAACTCCTGGGCATCAAGGAATAGGATGAAGTTGATCAAACCTTCAATTCTAAGCAAATATCTTTGCACGTACAGAGTTTCTTTTGCTTGAATTATCTGCTTAATTGTATCCCTTAATGTGGAGGATAACTTGATGACTGCAAGGTACTATTTTGTCTCGAAAATAGGGAATCCGATGCATTTTTGTACGTGAAAATTTATTTAACGAGACTGATTCTCAATAACAGTTGGATGTAGATTCAAAAATTTGCATGCCTTAATAAACATGGGATACAAATTCTTGATGCTTTTGAAATTCTCTCTCATACCTCTAGCGATTCGAAACTGCTATCCATATTGTGACAATTTCAT

mRNA sequence

TAATATCTTACAAGACGTGTGAATATACAAGAGATGCTGAATTTCAGTAATTGTCTTCTCTAAAATTACGCTTACGAGCAATTAATCGCCAATCGCAGAAACCTCACTGGAATAAGGTTAATTGCAGGCCGGAATTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGGTAATGGGCTCTTCTATGGCAAATTTTTGTGTGGTAACATATTTCTCCAATCTTATCGACAAAAGTTGGTTGCAGAGTTGCAGTCGGGAATTTGTATCCATGGCAGCGACGTTGAGTATGAGGATGACGACGATGGTATCAGCAGCCAGGGTTTATGCAATGGCTTCATCTTCCCCGGAGTCGCTCTTCGTCAAGAAAACCATCGCCTCCCACCACATCGATCTATTGTTAATCTCATTTCTGCTATTCGACTTTCGTTGTTCTATGTTAACCCGCGGCGGTCATGTGCAACTACTTTAATATTGTTTTTGATTGTGCGATGCAGGTATTGTGAAACGGCAAAAGCTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGCTGGATCAACGGGATGATGGCAGTGCCATTCAAGATGCTCTTAGTGCACTTGTTGGAAGACGCACTGTTCCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGATACTGTTGAAGCTTATGAGAGCGGAGAGTTGGGTAAACTCCTGGGCATCAAGGAATAGGATGAAGTTGATCAAACCTTCAATTCTAAGCAAATATCTTTGCACGTACAGAGTTTCTTTTGCTTGAATTATCTGCTTAATTGTATCCCTTAATGTGGAGGATAACTTGATGACTGCAAGGTACTATTTTGTCTCGAAAATAGGGAATCCGATGCATTTTTGTACGTGAAAATTTATTTAACGAGACTGATTCTCAATAACAGTTGGATGTAGATTCAAAAATTTGCATGCCTTAATAAACATGGGATACAAATTCTTGATGCTTTTGAAATTCTCTCTCATACCTCTAGCGATTCGAAACTGCTATCCATATTGTGACAATTTCAT

Coding sequence (CDS)

ATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGGTAATGGGCTCTTCTATGGCAAATTTTTGTGTGGTAACATATTTCTCCAATCTTATCGACAAAAGTTGGTTGCAGAGTTGCAGTCGGGAATTTGTATCCATGGCAGCGACGTTGAGTATGAGGATGACGACGATGGTATCAGCAGCCAGGGTTTATGCAATGGCTTCATCTTCCCCGGAGTCGCTCTTCGTCAAGAAAACCATCGCCTCCCACCACATCGATCTATTGTTAATCTCATTTCTGCTATTCGACTTTCGTTGTTCTATGTTAACCCGCGGCGGTCATGTGCAACTACTTTAATATTGTTTTTGATTGTGCGATGCAGGTATTGTGAAACGGCAAAAGCTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGCTGGATCAACGGGATGATGGCAGTGCCATTCAAGATGCTCTTAGTGCACTTGTTGGAAGACGCACTGTTCCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGATACTGTTGAAGCTTATGAGAGCGGAGAGTTGGGTAAACTCCTGGGCATCAAGGAATAG

Protein sequence

MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNGLFYGKFLCGNIFLQSYRQKLVAELQSGICIHGSDVEYEDDDDGISSQGLCNGFIFPGVALRQENHRLPPHRSIVNLISAIRLSLFYVNPRRSCATTLILFLIVRCRYCETAKAVFKDLNKVPHVVELDQRDDGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKE

Homology

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BLAST of Carg15208 vs. NCBI nr
Match: KAG7023354.1 (Glutaredoxin-C4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 591.7 bits (1524), Expect = 3.6e-165
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNGLFYG 120
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNGLFYG
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNGLFYG 120

Query: 121 KFLCGNIFLQSYRQKLVAELQSGICIHGSDVEYEDDDDGISSQGLCNGFIFPGVALRQEN 180
           KFLCGNIFLQSYRQKLVAELQSGICIHGSDVEYEDDDDGISSQGLCNGFIFPGVALRQEN
Sbjct: 121 KFLCGNIFLQSYRQKLVAELQSGICIHGSDVEYEDDDDGISSQGLCNGFIFPGVALRQEN 180

Query: 181 HRLPPHRSIVNLISAIRLSLFYVNPRRSCATTLILFLIVRCRYCETAKAVFKDLNKVPHV 240
           HRLPPHRSIVNLISAIRLSLFYVNPRRSCATTLILFLIVRCRYCETAKAVFKDLNKVPHV
Sbjct: 181 HRLPPHRSIVNLISAIRLSLFYVNPRRSCATTLILFLIVRCRYCETAKAVFKDLNKVPHV 240

Query: 241 VELDQRDDGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKE 299
           VELDQRDDGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKE
Sbjct: 241 VELDQRDDGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKE 298

[Close]

BLAST of Carg15208 vs. NCBI nr
Match: KAG6589674.1 (Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-52
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 157

[Close]

BLAST of Carg15208 vs. NCBI nr
Match: XP_023516627.1 (glutaredoxin-C4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 113

[Close]

BLAST of Carg15208 vs. NCBI nr
Match: XP_022987347.1 (glutaredoxin-C4-like [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-52
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 113

[Close]

BLAST of Carg15208 vs. NCBI nr
Match: XP_022921332.1 (glutaredoxin-C4-like [Cucurbita moschata])

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSD 113

[Close]

BLAST of Carg15208 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-29
Identity = 64/110 (58.18%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 5   MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 64
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 65  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSD
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSD 110

[Close]

BLAST of Carg15208 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 6.7e-29
Identity = 69/115 (60.00%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAA +  R+    +AA++   A+ S    +AS ++ F+K+T+ +H +VIFSKSYCPYCRR
Sbjct: 1   MAALLG-RRFGMAAAALIALAALGSAASGTAS-KSSFVKSTVKAHDVVIFSKSYCPYCRR 60

Query: 61  AKAVFK--ELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFK  EL K PYVVELDQREDG +IQDA   ++GRRTVPQVFV+GKH+GGSD
Sbjct: 61  AKAVFKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSD 113

[Close]

BLAST of Carg15208 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 6   SMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 65
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 66  KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNG 117
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSD  G
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLG 115

[Close]

BLAST of Carg15208 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23
Identity = 48/85 (56.47%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 29  ASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQD 88
           A+  + + F++N I S++I IFSK+YCPY  RAK +F++L + PY+VELD REDG +IQ 
Sbjct: 25  AATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQS 84

Query: 89  AFMALIGRRTVPQVFVNGKHIGGSD 114
             + L+GR TVPQVFVNG+H+GGSD
Sbjct: 85  VLLDLVGRHTVPQVFVNGQHVGGSD 109

[Close]

BLAST of Carg15208 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 2.6e-17
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS++Q A     G+RT
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 99  VPQVFVNGKHIGGSD 114
           VP VF+NGKHIGG D
Sbjct: 67  VPNVFINGKHIGGCD 81

[Close]

BLAST of Carg15208 vs. ExPASy TrEMBL
Match: A0A6J1JA45 (glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 113

[Close]

BLAST of Carg15208 vs. ExPASy TrEMBL
Match: A0A6J1E059 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSD
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSD 113

[Close]

BLAST of Carg15208 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.9e-41
Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL GAS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKEL+KVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSD
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSD 112

[Close]

BLAST of Carg15208 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40
Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSD
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSD 112

[Close]

BLAST of Carg15208 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 91/113 (80.53%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKN IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSD
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSD 112

[Close]

BLAST of Carg15208 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 132.1 bits (331), Expect = 7.3e-31
Identity = 64/110 (58.18%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 5   MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 64
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 65  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSD 114
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSD
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSD 110

[Close]

BLAST of Carg15208 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 6   SMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 65
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 66  KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDGNG 117
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSD  G
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLG 115

[Close]

BLAST of Carg15208 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K  + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ       G+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 99  VPQVFVNGKHIGGSD 114
           VP VF+ G HIGG D
Sbjct: 67  VPNVFIGGNHIGGCD 81

[Close]

BLAST of Carg15208 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-15
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 22  AVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQ-R 81
           A++S   +S ST    +K T+A + +V++SK++C Y  + K++FK L   P VVELDQ  
Sbjct: 62  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 121

Query: 82  EDGSDIQDAFMALIGRRTVPQVFVNGKHIGG 112
            +GS +Q+    + G+ TVP VF+ GKHIGG
Sbjct: 122 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGG 152

[Close]

BLAST of Carg15208 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-15
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K  ++++ +V+FSK+YC YC+R K +  +L     V+ELD+  DG +IQ A     G+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 99  VPQVFVNGKHIGGSD 114
           VP VF+ G HIGG D
Sbjct: 83  VPNVFIKGNHIGGCD 97

The following BLAST results are available for this feature:

BLAST of Carg15208 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023354.1	3.6e-165	100.00	Glutaredoxin-C4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589674.1	1.1e-52	100.00	Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516627.1	2.4e-52	99.12	glutaredoxin-C4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987347.1	3.2e-52	99.12	glutaredoxin-C4-like [Cucurbita maxima]	[more]
XP_022921332.1	3.2e-52	99.12	glutaredoxin-C4-like [Cucurbita moschata]	[more]

BLAST of Carg15208 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	1.0e-29	58.18	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	6.7e-29	60.00	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q9FVX1	4.5e-25	51.35	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	3.2e-23	56.47	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
P55142	2.6e-17	52.00	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Carg15208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA45	1.5e-52	99.12	glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1	[more]
A0A6J1E059	1.5e-52	99.12	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1	[more]
A0A0A0LXH3	7.9e-41	81.42	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A5D3DXQ7	3.0e-40	81.42	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A5A7UQP8	1.1e-39	80.53	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]

BLAST of Carg15208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	7.3e-31	58.18	Glutaredoxin family protein	[more]
AT1G77370.1	3.2e-26	51.35	Glutaredoxin family protein	[more]
AT5G40370.1	1.9e-15	48.00	Glutaredoxin family protein	[more]
AT2G20270.1	2.5e-15	42.86	Thioredoxin superfamily protein	[more]
AT5G63030.1	7.4e-15	44.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 47..65 score: 47.81 coord: 106..119 score: 34.82 coord: 92..105 score: 51.79
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 219..275 e-value: 4.0E-14 score: 52.6 coord: 47..109 e-value: 1.6E-19 score: 69.8
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 47..113 e-value: 1.1E-25 score: 87.6
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 210..298 e-value: 4.9E-27 score: 95.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 28..115 e-value: 2.4E-31 score: 109.7
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 10..115 coord: 213..289
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 10..115 coord: 213..289
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 201..298 score: 18.214561
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..140 score: 19.322577
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 47..113 e-value: 5.7843E-38 score: 127.271
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 221..293 e-value: 2.2548E-33 score: 115.715
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 49..64
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 213..294
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15208-RA	Carg15208-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity