Carg15161 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15161
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal protein S24/S35, mitochondrial
Location	Carg_Chr10: 1418486 .. 1421247 (+)
RNA-Seq Expression	Carg15161
Synteny	Carg15161

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGATAGATAAGTACTTCAAAGGTGACGAGGAGGCACTTCCATCAATTCTTGAAGCTATTCTTCGGAGGAAACTGGTTGGAAAGCATGAAGATACGGATGATGAACTTGTTGAAGAACTACAAATGCAGCCATTGGATGACGTCAAGGACAAAGAGTTTGAATCTGATTTTGAAGAATTGTATGAGACAGATGAAGAGATTGACGACCTTTATAATACTAGGGATATAGTTATGAAAAAAATGGTAAAGAACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATTCTGAAGGACACCAAGGAGTGTGAAGAGATTTTGGAGGATATGCTTAGTTGGGACAAGCTCCTTCCAGGTTTGCCCGTTTCCTTTACATGCTCGTTTCAGTTGGTATCACTCCTAAGAAATTAGTGTGCAACATTCCATCATATTTCTTGTGTTATACTTGCCTTACTTCTTCTTCCTGGATTGGTTTCTGACTTACGTCCCTTTTCTGCGTTCCTATTTCTCTTCCATACTATACTTTCGAAGCAAAAGGTTTTAAATGTAAGTTTATGGTGTTGTGTACGCTACCAATTTGTTTCTGGTGGTTCATATCAACTAATTGTAGCTTCATTTTGCATCTTATTTATTTAGTTATGATAGCTATACATCGATATGATGTTGAAGTTCTAAAGAATTATTTTCCATTTAGGCTGAAGATTTCAAACTGGCTCCGAAATGGTTGTTGTCATTCCTCTCTTTATGCCCAATTAGAAAATTTTCTTTGGATTCTATCTGCCGTATTAAGTCTCCTATAACAAAGAGTCCCCAAATAGAACTTAACTTTCTGTATATCTTAAACTTCTAATCAAATGCACCGAAAGATCTTTCATATCACTAGGCTTTGAGATATGGAGGAAAACAGATTTTCAAGAGAAAGAACACTGAGGAAAGCGGATTTTCAAGAAAAAGAACCCTTGGTGTCTATCGTTTTCTAATGGTGTATCTATCGTTAAGCCATGTATGAAGTATCTATCACTTTCTTATTACAGGTGATCTATTGTCTCATGTATTACTTCTTGTCCTATTATGGTCGTACTAACTGGTTGGGAAATCATCCTTTCTCTTCTCGGAGTAAAGTCCACTATTTCTATTTTTGGTACTATTTATGAATTTGAAGTGCGAGACTTGCAAAATTTTATATCTTGTTTTCTTACCCCATTATTTAACTTTTTGTCCAAACCTGTGGAATTTCAAGCCTTGTGAGAAACAACATTTGTTGTGTTAACTTGATTGTTATAGTTGTCTAACTTGTGCAATCATCTCTACAATTGTTTATTTTGTGTTACGTTCATGGTAACATTACCTTCCTGAATAAATTCTCTTTATTGAAACTTTTTCCCATTTCTTGGTCATTAACTGTCCATTAGATGATATGAAGAAAAAAGTAGAAGCAAAATTCAATGAGCTGGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCTGTTTAAAGAATTTGAAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGCCCCCCGAAGTTTGATGAAACCGATGTGCCAGATAATAAAAAGGACTTGGATGACCCGCCAGGTGAAGGCCCAATTCTTAGGTGGCAAACAAGGGTCGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAACCGAAAAGTGAAATTATCTGTTACTGTGAAGGAGCTTGGCTTATCAAAGTACCAATTCCGTCGACTGAGGGAGTTGGTTGGCAAGCGCTATCATCCTGGGAAAGATGAGCTTACCATTACCAGTGAGAGGTAAGGTCAACAGTTATATGCTGTAACCTTTAGTTCTATTGATACTTGTAGTAGGACCATGTTTTTGGTGTTCGACACATCTTAGTAGGACAAAAGAATGCATCTGGCATTTCTAATAGAGATGCCAATTTCTTGTGACACAAAATAAATAGGACAGATCGTCACATTTTGTGCCCCCCGGAATCTTGACGACGAACCCCAGTCAGATCTTGCTGAACTTTCGCAGTCTATGTCATGATTTGTCTGAGTTTAGCTTTCATTGTTTCTAACTTCAATTGTACTTCTCAGGTTTGAACACAGGGAGGAAAACAGAAAGGATTGCCTCAGGACTCTTTTTTCTCTAATTGAGGAAGCTGGAAAAGCCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGGGCGAACCCCCAGTTTATGGAGAGGCTGCGTGCCAAGAAAATGGGTTCGCAAGTATCAAGCAGCCCTTTACCTGCTTGATTGTTTGACTTCGGATGCTGTTGAAAAGAAAACTACTGATTTGGTAAAACGTTTCTGGATATGATGTCTCCTCCAATGATTGGTAATGTTTAAAATATTTTCTTTACCTAATTAGTTTTCACTATTTGGGGCAATGACAGAGAAAAAGGAACACTTGAAGTTAAAGATAGTAGATTTTGTATACAACCATAAGGTGATATTTGTTACCAAAGTTTTCCCTCTGAATTACCCTTTTTGGTTGGAAATCTAGGCTTCTTTCTTCTTCAAAAAGCTTTATTTTGGGATAAACATCAAATCTTGTTTAGCCTTAAACAGAGGGAAAGTAGGGATGTGTAGCTATAATAAGTAACCTTTGGTTGAGATTAGCGATATGAAAAATTGATTGCAGAAATTCGTAAGCTACTAATTT

mRNA sequence

ATGCGGATAGATAAGTACTTCAAAGGTGACGAGGAGGCACTTCCATCAATTCTTGAAGCTATTCTTCGGAGGAAACTGGTTGGAAAGCATGAAGATACGGATGATGAACTTGTTGAAGAACTACAAATGCAGCCATTGGATGACGTCAAGGACAAAGAGTTTGAATCTGATTTTGAAGAATTGTATGAGACAGATGAAGAGATTGACGACCTTTATAATACTAGGGATATAGTTATGAAAAAAATGGTAAAGAACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATTCTGAAGGACACCAAGGAGTGTGAAGAGATTTTGGAGGATATGCTTAGTTGGGACAAGCTCCTTCCAGATGATATGAAGAAAAAAGTAGAAGCAAAATTCAATGAGCTGGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCTGTTTAAAGAATTTGAAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGCCCCCCGAAGTTTGATGAAACCGATGTGCCAGATAATAAAAAGGACTTGGATGACCCGCCAGGTGAAGGCCCAATTCTTAGGTGGCAAACAAGGGTCGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAACCGAAAAGTGAAATTATCTGTTACTGTGAAGGAGCTTGGCTTATCAAAGTACCAATTCCGTCGACTGAGGGAGTTGGTTGGCAAGCGCTATCATCCTGGGAAAGATGAGCTTACCATTACCAGTGAGAGGTTTGAACACAGGGAGGAAAACAGAAAGGATTGCCTCAGGACTCTTTTTTCTCTAATTGAGGAAGCTGGAAAAGCCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGGGCGAACCCCCAGTTTATGGAGAGGCTGCGTGCCAAGAAAATGGGTTCGCAAGTATCAAGCAGCCCTTTACCTGCTTGATTGTTTGACTTCGGATGCTGTTGAAAAGAAAACTACTGATTTGGTAAAACGTTTCTGGATATGATGTCTCCTCCAATGATTGGTAATGTTTAAAATATTTTCTTTACCTAATTAGTTTTCACTATTTGGGGCAATGACAGAGAAAAAGGAACACTTGAAGTTAAAGATAGTAGATTTTGTATACAACCATAAGGTGATATTTGTTACCAAAGTTTTCCCTCTGAATTACCCTTTTTGGTTGGAAATCTAGGCTTCTTTCTTCTTCAAAAAGCTTTATTTTGGGATAAACATCAAATCTTGTTTAGCCTTAAACAGAGGGAAAGTAGGGATGTGTAGCTATAATAAGTAACCTTTGGTTGAGATTAGCGATATGAAAAATTGATTGCAGAAATTCGTAAGCTACTAATTT

Coding sequence (CDS)

ATGCGGATAGATAAGTACTTCAAAGGTGACGAGGAGGCACTTCCATCAATTCTTGAAGCTATTCTTCGGAGGAAACTGGTTGGAAAGCATGAAGATACGGATGATGAACTTGTTGAAGAACTACAAATGCAGCCATTGGATGACGTCAAGGACAAAGAGTTTGAATCTGATTTTGAAGAATTGTATGAGACAGATGAAGAGATTGACGACCTTTATAATACTAGGGATATAGTTATGAAAAAAATGGTAAAGAACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATTCTGAAGGACACCAAGGAGTGTGAAGAGATTTTGGAGGATATGCTTAGTTGGGACAAGCTCCTTCCAGATGATATGAAGAAAAAAGTAGAAGCAAAATTCAATGAGCTGGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCTGTTTAAAGAATTTGAAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGCCCCCCGAAGTTTGATGAAACCGATGTGCCAGATAATAAAAAGGACTTGGATGACCCGCCAGGTGAAGGCCCAATTCTTAGGTGGCAAACAAGGGTCGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAACCGAAAAGTGAAATTATCTGTTACTGTGAAGGAGCTTGGCTTATCAAAGTACCAATTCCGTCGACTGAGGGAGTTGGTTGGCAAGCGCTATCATCCTGGGAAAGATGAGCTTACCATTACCAGTGAGAGGTTTGAACACAGGGAGGAAAACAGAAAGGATTGCCTCAGGACTCTTTTTTCTCTAATTGAGGAAGCTGGAAAAGCCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGGGCGAACCCCCAGTTTATGGAGAGGCTGCGTGCCAAGAAAATGGGTTCGCAAGTATCAAGCAGCCCTTTACCTGCTTGA

Protein sequence

MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA

Homology

[Close]

BLAST of Carg15161 vs. NCBI nr
Match: KAG7023307.1 (hypothetical protein SDJN02_14332, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 666.0 bits (1717), Expect = 1.7e-187
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED
Sbjct: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 335

[Close]

BLAST of Carg15161 vs. NCBI nr
Match: XP_022921942.1 (uncharacterized protein LOC111430048 [Cucurbita moschata])

HSP 1 Score: 666.0 bits (1717), Expect = 1.7e-187
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED
Sbjct: 146 LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. NCBI nr
Match: KAG6589616.1 (hypothetical protein SDJN03_15039, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 662.1 bits (1707), Expect = 2.5e-186
Identity = 333/335 (99.40%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYN RDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED
Sbjct: 146 LYETDEEIDDLYNARDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGK+ELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKNELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. NCBI nr
Match: XP_023516875.1 (uncharacterized protein LOC111780645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.1 bits (1699), Expect = 2.1e-185
Identity = 331/335 (98.81%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAILRRKLVGKHE+TDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILRRKLVGKHEETDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECE ILED
Sbjct: 146 LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEAILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE+AYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEDAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGK+ELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKNELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. NCBI nr
Match: XP_022988239.1 (uncharacterized protein LOC111485553 [Cucurbita maxima])

HSP 1 Score: 657.1 bits (1694), Expect = 7.9e-185
Identity = 330/335 (98.51%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAIL+RKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILQRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEID+LYN RDIVMKKMVKNEYFNMDDKKWDELVEDGIKHG LKDTKECEEILED
Sbjct: 146 LYETDEEIDNLYNARDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGFLKDTKECEEILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGK+ELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKNELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. ExPASy Swiss-Prot
Match: Q03976 (37S ribosomal protein S24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSM24 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.9e-04
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 222 HPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLR 281
           HP +RKV LSV  KELGL +    + R L   RY    D   ++S++FEH  +N +    
Sbjct: 194 HPNSRKVVLSVKTKELGLEEKSLHKFRILARSRYDHTTDIFKMSSDKFEHASQNARYLHD 253

Query: 282 TLFSLIEEA 291
            L  L+ E+
Sbjct: 254 ILQRLLAES 262

[Close]

BLAST of Carg15161 vs. ExPASy TrEMBL
Match: A0A6J1E1S5 (uncharacterized protein LOC111430048 OS=Cucurbita moschata OX=3662 GN=LOC111430048 PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 8.3e-188
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED
Sbjct: 146 LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. ExPASy TrEMBL
Match: A0A6J1JL06 (uncharacterized protein LOC111485553 OS=Cucurbita maxima OX=3661 GN=LOC111485553 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.8e-185
Identity = 330/335 (98.51%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRIDKYFKGDEEALPSILEAIL+RKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE
Sbjct: 86  MRIDKYFKGDEEALPSILEAILQRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEID+LYN RDIVMKKMVKNEYFNMDDKKWDELVEDGIKHG LKDTKECEEILED
Sbjct: 146 LYETDEEIDNLYNARDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGFLKDTKECEEILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGK+ELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKNELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA
Sbjct: 386 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of Carg15161 vs. ExPASy TrEMBL
Match: A0A6J1C1G2 (uncharacterized protein LOC111007394 OS=Momordica charantia OX=3673 GN=LOC111007394 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.1e-179
Identity = 319/335 (95.22%), Postives = 329/335 (98.21%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           MRI+KYFKGDEEALPSILEAIL+RKL GKHEDTDDEL+EEL+MQPLDDVKDKEFESDFEE
Sbjct: 86  MRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDDELIEELRMQPLDDVKDKEFESDFEE 145

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLYN RDIVMKKMVK+EYFNMDDKKWDELVEDGIKHGILKDTKECE ILED
Sbjct: 146 LYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKWDELVEDGIKHGILKDTKECEAILED 205

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPEEAY++FKEFEDQMVMEYGKMMEAEG
Sbjct: 206 MLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPEEAYSMFKEFEDQMVMEYGKMMEAEG 265

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS
Sbjct: 266 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 325

Query: 241 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA 300
           KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTL+SLIEEAGKANKLVEDA
Sbjct: 326 KYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLYSLIEEAGKANKLVEDA 385

Query: 301 RTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           R SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 386 RASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 419

[Close]

BLAST of Carg15161 vs. ExPASy TrEMBL
Match: A0A6J1EY83 (uncharacterized protein LOC111439871 OS=Cucurbita moschata OX=3662 GN=LOC111439871 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 306/330 (92.73%), Postives = 316/330 (95.76%), Query Frame = 0


Query: 1   MRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEE 60
           M+IDKYFKGDEEALPSILEAIL+RKL GKHE TDDELVEEL+MQPLDDVKDKEFESDFEE
Sbjct: 1   MKIDKYFKGDEEALPSILEAILQRKLGGKHEGTDDELVEELRMQPLDDVKDKEFESDFEE 60

Query: 61  LYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILED 120
           LYETDEEIDDLY+ RDIVMKKMVK+EYFNMDDKKWDELVED IKHGILKDTKECE+ILED
Sbjct: 61  LYETDEEIDDLYSARDIVMKKMVKDEYFNMDDKKWDELVEDAIKHGILKDTKECEQILED 120

Query: 121 MLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEG 180
           MLSWDKLLPDDMKK+VEAKFNELGDLCEKGELEPEEAYN FK+FEDQMVMEYGKMMEAEG
Sbjct: 121 MLSWDKLLPDDMKKQVEAKFNELGDLCEKGELEPEEAYNQFKQFEDQMVMEYGKMMEAEG 180

Query: 181 PPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLS 240
           PPKFD TDV DNKKDLD+PPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVK LGLS
Sbjct: 181 PPKFDGTDVADNKKDLDEPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKGLGLS 240

Query: 241 KYQFRRLRELVGKRYHPGKDELT-ITSERFEHREENRKDCLRTLFSLIEEAGKANKLVED 300
            YQFRRLRELVGKRYHPGKDELT  TSERFEHREENRKDCLRTLFSLIEEAGKANKLVED
Sbjct: 241 NYQFRRLRELVGKRYHPGKDELTSFTSERFEHREENRKDCLRTLFSLIEEAGKANKLVED 300

Query: 301 ARTSYVKERLRANPQFMERLRAKKMGSQVS 330
           ARTSYVKERLR NPQF+ERLRAKKMG Q S
Sbjct: 301 ARTSYVKERLRVNPQFIERLRAKKMGLQPS 330

[Close]

BLAST of Carg15161 vs. ExPASy TrEMBL
Match: A0A5A7UTN9 (28S ribosomal S35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004050 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 289/334 (86.53%), Postives = 316/334 (94.61%), Query Frame = 0


Query: 2   RIDKYFKGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDVKDKEFESDFEEL 61
           RI+KYFKGDEEAL SILEAILRRKL GKHEDTDDELVEEL+M+PL+DVKD+EFESDFEEL
Sbjct: 87  RIEKYFKGDEEALSSILEAILRRKLAGKHEDTDDELVEELRMKPLEDVKDREFESDFEEL 146

Query: 62  YETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILEDM 121
           ++TDEEIDDLY  +++VM++M K+EYFNMDDKKW+++V+D + HGIL DTKECE ILEDM
Sbjct: 147 HDTDEEIDDLYYAKNLVMERMAKDEYFNMDDKKWEDIVQDAVNHGILNDTKECEAILEDM 206

Query: 122 LSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAEGP 181
           L+WDKLLPDD+K+KVEAKFNELGDLCEKGELEPEEAYN FK++ED++VMEYGKMMEAE  
Sbjct: 207 LNWDKLLPDDLKEKVEAKFNELGDLCEKGELEPEEAYNQFKKYEDEVVMEYGKMMEAEA- 266

Query: 182 PKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSK 241
           P FDETDV DNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSK
Sbjct: 267 PTFDETDVQDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSK 326

Query: 242 YQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDAR 301
           YQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDA+
Sbjct: 327 YQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVEDAQ 386

Query: 302 TSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 336
           T YVKERLRANPQFMERLR+KKM SQV SSP PA
Sbjct: 387 TLYVKERLRANPQFMERLRSKKMSSQV-SSPQPA 418

[Close]

BLAST of Carg15161 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-141
Identity = 241/332 (72.59%), Postives = 292/332 (87.95%), Query Frame = 0


Query: 2   RIDKYF-KGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPL-DDVKDKEFESDFE 61
           RI+KYF +G+E+ALP ++EA+L+R+LV KH +TDDEL+E+++  P  DDVKD++FESDFE
Sbjct: 85  RIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKDEDFESDFE 144

Query: 62  ELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILE 121
           E + TDEE++DLYN+ + V +KM KNE+FNMDDKKWD ++ +GI+HG L DTKECEEILE
Sbjct: 145 EAHSTDEELEDLYNSPEYVAEKMRKNEFFNMDDKKWDHMIREGIQHGCLTDTKECEEILE 204

Query: 122 DMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAE 181
           DML WD+LLPDD+KKKVEAKFNELGD+CE+GE+E E AY LFKEFED+MV++YG  MEAE
Sbjct: 205 DMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIEAEAAYELFKEFEDEMVIQYGDQMEAE 264

Query: 182 GPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGL 241
           GPP+F ETD  D   DLDDPPG+GPILRWQ+R+VFAPGGDAWHPKNRKVK+SVTVKELGL
Sbjct: 265 GPPQFGETDASDRNTDLDDPPGKGPILRWQSRIVFAPGGDAWHPKNRKVKMSVTVKELGL 324

Query: 242 SKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVED 301
           SK+Q +RLRELVGKRYH GKDELTITSERFEHREENRKDCLRTL+ LIEEAGKANK+ ED
Sbjct: 325 SKHQAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRTLYGLIEEAGKANKIAED 384

Query: 302 ARTSYVKERLRANPQFMERLRAKKMGSQVSSS 332
            RTSYVK+RLRANP FM++L+AK + S+ S +
Sbjct: 385 IRTSYVKQRLRANPAFMQKLQAKIIRSKESDA 416

[Close]

BLAST of Carg15161 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-141
Identity = 241/332 (72.59%), Postives = 292/332 (87.95%), Query Frame = 0


Query: 2   RIDKYF-KGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPL-DDVKDKEFESDFE 61
           RI+KYF +G+E+ALP ++EA+L+R+LV KH +TDDEL+E+++  P  DDVKD++FESDFE
Sbjct: 85  RIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKDEDFESDFE 144

Query: 62  ELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILE 121
           E + TDEE++DLYN+ + V +KM KNE+FNMDDKKWD ++ +GI+HG L DTKECEEILE
Sbjct: 145 EAHSTDEELEDLYNSPEYVAEKMRKNEFFNMDDKKWDHMIREGIQHGCLTDTKECEEILE 204

Query: 122 DMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAE 181
           DML WD+LLPDD+KKKVEAKFNELGD+CE+GE+E E AY LFKEFED+MV++YG  MEAE
Sbjct: 205 DMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIEAEAAYELFKEFEDEMVIQYGDQMEAE 264

Query: 182 GPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGL 241
           GPP+F ETD  D   DLDDPPG+GPILRWQ+R+VFAPGGDAWHPKNRKVK+SVTVKELGL
Sbjct: 265 GPPQFGETDASDRNTDLDDPPGKGPILRWQSRIVFAPGGDAWHPKNRKVKMSVTVKELGL 324

Query: 242 SKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVED 301
           SK+Q +RLRELVGKRYH GKDELTITSERFEHREENRKDCLRTL+ LIEEAGKANK+ ED
Sbjct: 325 SKHQAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRTLYGLIEEAGKANKIAED 384

Query: 302 ARTSYVKERLRANPQFMERLRAKKMGSQVSSS 332
            RTSYVK+RLRANP FM++L+AK + S+ S +
Sbjct: 385 IRTSYVKQRLRANPAFMQKLQAKIIRSKESDA 416

[Close]

BLAST of Carg15161 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 481.9 bits (1239), Expect = 4.3e-136
Identity = 234/332 (70.48%), Postives = 287/332 (86.45%), Query Frame = 0


Query: 2   RIDKYF-KGDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPL-DDVKDKEFESDFE 61
           RIDK F +G+E+ALP ++EA+L+R+LV KH +TDDEL+E+++  P  DDVKD++FESDFE
Sbjct: 81  RIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKDEDFESDFE 140

Query: 62  ELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKWDELVEDGIKHGILKDTKECEEILE 121
           E + TDEE++DLYN+ + V +KM K E+FNMDD KWD ++ +GI+HG L DTK+CEEILE
Sbjct: 141 EAHSTDEELEDLYNSPEYVAEKMRKKEFFNMDDNKWDHMIREGIQHGCLTDTKQCEEILE 200

Query: 122 DMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPEEAYNLFKEFEDQMVMEYGKMMEAE 181
           DML WD+LLPDD+KKKVEAKFNELGD+CE+GE+E E AY LFKEFED+MV++YG  MEAE
Sbjct: 201 DMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIEAEAAYELFKEFEDEMVIQYGDQMEAE 260

Query: 182 GPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGL 241
           GPP+F ETD  D   DLDDP G+GPILRWQ+R+VFAPGGDAWHPKNRKVK+SVTVKELGL
Sbjct: 261 GPPQFGETDTSDRNTDLDDPSGKGPILRWQSRIVFAPGGDAWHPKNRKVKMSVTVKELGL 320

Query: 242 SKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLVED 301
           S +Q +RLRELVGKRYH GKDELTIT ERFEHREENRKDCLRTL+ LIEEAGKANK+ ED
Sbjct: 321 SNHQAKRLRELVGKRYHSGKDELTITCERFEHREENRKDCLRTLYGLIEEAGKANKIAED 380

Query: 302 ARTSYVKERLRANPQFMERLRAKKMGSQVSSS 332
            RTSYVK+RLRA+P FM++L+AK + S+ S++
Sbjct: 381 IRTSYVKQRLRASPAFMQKLQAKIIRSKESNA 412

[Close]

BLAST of Carg15161 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-05
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 9   GDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDV-KDKEFESDFE-----ELY 68
           G+E+A+P + EA++ RKL GKH+D+DDE+++ ++  P++D  K  + +SD E     +  
Sbjct: 80  GNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGDSS 139

Query: 69  ETDEEIDDL 72
           ++D E DDL
Sbjct: 140 DSDIESDDL 148

[Close]

BLAST of Carg15161 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-05
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 9   GDEEALPSILEAILRRKLVGKHEDTDDELVEELQMQPLDDV-KDKEFESDFE-----ELY 68
           G+E+A+P + EA++ RKL GKH+D+DDE+++ ++  P++D  K  + +SD E     +  
Sbjct: 80  GNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGDSS 139

Query: 69  ETDEEIDDL 72
           ++D E DDL
Sbjct: 140 DSDIESDDL 148

The following BLAST results are available for this feature:

BLAST of Carg15161 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023307.1	1.7e-187	100.00	hypothetical protein SDJN02_14332, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022921942.1	1.7e-187	100.00	uncharacterized protein LOC111430048 [Cucurbita moschata]	[more]
KAG6589616.1	2.5e-186	99.40	hypothetical protein SDJN03_15039, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516875.1	2.1e-185	98.81	uncharacterized protein LOC111780645 [Cucurbita pepo subsp. pepo]	[more]
XP_022988239.1	7.9e-185	98.51	uncharacterized protein LOC111485553 [Cucurbita maxima]	[more]

BLAST of Carg15161 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03976	4.9e-04	37.68	37S ribosomal protein S24, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Carg15161 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1S5	8.3e-188	100.00	uncharacterized protein LOC111430048 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A6J1JL06	3.8e-185	98.51	uncharacterized protein LOC111485553 OS=Cucurbita maxima OX=3661 GN=LOC111485553...	[more]
A0A6J1C1G2	4.1e-179	95.22	uncharacterized protein LOC111007394 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1EY83	1.7e-169	92.73	uncharacterized protein LOC111439871 OS=Cucurbita moschata OX=3662 GN=LOC1114398...	[more]
A0A5A7UTN9	1.7e-161	86.53	28S ribosomal S35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]

BLAST of Carg15161 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18240.1	7.5e-141	72.59	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.2	7.5e-141	72.59	Ribosomal protein S24/S35, mitochondrial	[more]
AT4G21460.1	4.3e-136	70.48	Ribosomal protein S24/S35, mitochondrial	[more]
AT1G73770.1	2.7e-05	39.13	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G73770.2	2.7e-05	39.13	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019349	Ribosomal protein S24/S35, mitochondrial, conserved domain	PFAM	PF10213	MRP-S28	coord: 221..310 e-value: 2.1E-18 score: 66.9
None	No IPR available	GENE3D	3.30.160.20		coord: 206..331 e-value: 5.7E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..201
IPR039848	Ribosomal protein S24/S35, mitochondrial	PANTHER	PTHR13490	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28	coord: 2..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15161-RA	Carg15161-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome