Carg15009 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15009
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr07: 598460 .. 598903 (+)
RNA-Seq Expression	Carg15009
Synteny	Carg15009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAGAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA

mRNA sequence

ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAGAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA

Coding sequence (CDS)

ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAGAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA

Protein sequence

MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRITFGTLTGISKSFPVSAFLIEEETDQKK

Homology

[Close]

BLAST of Carg15009 vs. NCBI nr
Match: XP_022926669.1 (uncharacterized protein LOC111433730 [Cucurbita moschata] >KAG6594468.1 hypothetical protein SDJN03_11021, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026466.1 hypothetical protein SDJN02_10466, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI
Sbjct: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGISKSFPVSAFLIEEETDQKK
Sbjct: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 147

[Close]

BLAST of Carg15009 vs. NCBI nr
Match: XP_023517978.1 (uncharacterized protein LOC111781549 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFF ITVSDIYIDVHNTSRI
Sbjct: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFLITVSDIYIDVHNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGISKSFPVSAFLIEEETDQKK
Sbjct: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 147

[Close]

BLAST of Carg15009 vs. NCBI nr
Match: XP_023003355.1 (uncharacterized protein LOC111496988 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 8.5e-75
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           MSTQLE HRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 1   MSTQLEIHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI
Sbjct: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGISKSFPVSAFLIEE TDQKK
Sbjct: 121 TFGTLTGISKSFPVSAFLIEEGTDQKK 147

[Close]

BLAST of Carg15009 vs. NCBI nr
Match: XP_038882768.1 (uncharacterized protein LOC120073921 [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 7.8e-68
Identity = 132/147 (89.80%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M+TQL THRADAEIY+GDA+CKQKSQELLDQFFLPRGLLPLN+ILEVGYN+TSGFIW KQ
Sbjct: 1   MTTQLATHRADAEIYNGDALCKQKSQELLDQFFLPRGLLPLNEILEVGYNKTSGFIWFKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRF AIGRTVLYD EVTAFIEERRLRRLTGVKSKEFF  ITVSDIYID  NTSRI
Sbjct: 61  QKKKEHRFAAIGRTVLYDIEVTAFIEERRLRRLTGVKSKEFFLWITVSDIYIDEQNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGI+KSFPVSAFLIEEETD+KK
Sbjct: 121 TFGTLTGIAKSFPVSAFLIEEETDRKK 147

[Close]

BLAST of Carg15009 vs. NCBI nr
Match: XP_004134915.2 (uncharacterized protein LOC101215500 [Cucumis sativus] >KGN49395.1 hypothetical protein Csa_004115 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 5.0e-67
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M+TQL THRADAEIY+GDAICKQKSQ+LLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 43  MTTQLATHRADAEIYYGDAICKQKSQDLLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 102

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRF AIGRTVLYDTEV+AFIEERR RRLTGVKSKEFF  ITVS+IY+D  NTS+I
Sbjct: 103 QKKKEHRFPAIGRTVLYDTEVSAFIEERRFRRLTGVKSKEFFLWITVSEIYVDQQNTSKI 162

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGT TGI+KSFPVSAFLIEEETD+KK
Sbjct: 163 TFGTSTGIAKSFPVSAFLIEEETDRKK 189

[Close]

BLAST of Carg15009 vs. ExPASy TrEMBL
Match: A0A6J1EFT7 (uncharacterized protein LOC111433730 OS=Cucurbita moschata OX=3662 GN=LOC111433730 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI
Sbjct: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGISKSFPVSAFLIEEETDQKK
Sbjct: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 147

[Close]

BLAST of Carg15009 vs. ExPASy TrEMBL
Match: A0A6J1KRJ1 (uncharacterized protein LOC111496988 OS=Cucurbita maxima OX=3661 GN=LOC111496988 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           MSTQLE HRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 1   MSTQLEIHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI
Sbjct: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGTLTGISKSFPVSAFLIEE TDQKK
Sbjct: 121 TFGTLTGISKSFPVSAFLIEEGTDQKK 147

[Close]

BLAST of Carg15009 vs. ExPASy TrEMBL
Match: A0A0A0KI40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523360 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M+TQL THRADAEIY+GDAICKQKSQ+LLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ
Sbjct: 43  MTTQLATHRADAEIYYGDAICKQKSQDLLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 102

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRF AIGRTVLYDTEV+AFIEERR RRLTGVKSKEFF  ITVS+IY+D  NTS+I
Sbjct: 103 QKKKEHRFPAIGRTVLYDTEVSAFIEERRFRRLTGVKSKEFFLWITVSEIYVDQQNTSKI 162

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGT TGI+KSFPVSAFLIEEETD+KK
Sbjct: 163 TFGTSTGIAKSFPVSAFLIEEETDRKK 189

[Close]

BLAST of Carg15009 vs. ExPASy TrEMBL
Match: A0A1S3AZ86 (uncharacterized protein LOC103484371 OS=Cucumis melo OX=3656 GN=LOC103484371 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.1e-67
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M+TQL T  ADAEIY+GDAICKQKSQELLDQFFLPRGLLPL+DILEVGYNRTSGFIWLKQ
Sbjct: 1   MTTQLATRTADAEIYNGDAICKQKSQELLDQFFLPRGLLPLDDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRF AIGRTVLYDTEVTAFIEERR RRLTGVKSKEFFF ITVSDIYID  NTS+I
Sbjct: 61  QKKKEHRFPAIGRTVLYDTEVTAFIEERRFRRLTGVKSKEFFFWITVSDIYIDEQNTSKI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGT TGI+KSFPVSAFLIEEETD+KK
Sbjct: 121 TFGTSTGIAKSFPVSAFLIEEETDRKK 147

[Close]

BLAST of Carg15009 vs. ExPASy TrEMBL
Match: A0A5D3CN75 (DUF538 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009000 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.1e-67
Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M+TQ+ T  ADAEIY+GDAICKQKSQELLDQFFLPRGLLPL+DILEVGYNRTSGFIWLKQ
Sbjct: 1   MTTQIATRTADAEIYNGDAICKQKSQELLDQFFLPRGLLPLDDILEVGYNRTSGFIWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           QKKKEHRF AIGRTVLYDTEVTAFIEERR RRLTGVKSKEFFF ITVSDIYID  NTS+I
Sbjct: 61  QKKKEHRFPAIGRTVLYDTEVTAFIEERRFRRLTGVKSKEFFFWITVSDIYIDEQNTSKI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEETDQKK 148
           TFGT TGI+KSFPVSAFLIEEETD+KK
Sbjct: 121 TFGTSTGIAKSFPVSAFLIEEETDRKK 147

[Close]

BLAST of Carg15009 vs. TAIR 10
Match: AT5G46230.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 64/133 (48.12%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 9   RADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRF 68
           R  AEI +G++ CKQK++E+L    LP+GLLPL+++ E+G+N+++G++W+K + K +HRF
Sbjct: 11  REGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKVQHRF 70

Query: 69  VAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRITFGTLTGI 128
            AIGR V YD+EVTA +E RR+ +LTG+KSKE    +T+S+I+++  + ++ITF   TG+
Sbjct: 71  KAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFANPTGL 130

Query: 129 SKSFPVSAFLIEE 142
           S++FPV+AF  +E
Sbjct: 131 SRTFPVTAFEEDE 143

[Close]

BLAST of Carg15009 vs. TAIR 10
Match: AT1G09310.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-33
Identity = 68/142 (47.89%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 1   MSTQLETHRADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQ 60
           M    E  RA AE+Y GD IC++K++  L +  +P GLLPL DI EVGY+R SG +WLKQ
Sbjct: 1   MGLVTEEVRAKAEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLKQ 60

Query: 61  QKKKEHRFVAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRI 120
           +K   H+F  I + V Y TEVTA +E  ++++LTGVK+KE    +T+++IY +   T +I
Sbjct: 61  KKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-KI 120

Query: 121 TFGTLTGISKSFPVSAFLIEEE 143
           TF T T +S++FPV+AF++ EE
Sbjct: 121 TFKTPTTLSRTFPVTAFIVPEE 141

[Close]

BLAST of Carg15009 vs. TAIR 10
Match: AT1G56580.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-32
Identity = 65/134 (48.51%), Postives = 97/134 (72.39%), Query Frame = 0


Query: 9   RADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRF 68
           RA AE Y GD IC++K++E L +  +P GLLPL DI EVGY+R +G +WLKQ+K   H+F
Sbjct: 9   RARAEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQKKSITHKF 68

Query: 69  VAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTS-RITFGTLTG 128
            AIG+ V Y TEV A +E  ++++LTGVK+KE    +T++++ ++   +S +I F T TG
Sbjct: 69  EAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGKINFRTPTG 128

Query: 129 ISKSFPVSAFLIEE 142
           +S++FPVSAF++ E
Sbjct: 129 LSRTFPVSAFVVPE 142

[Close]

BLAST of Carg15009 vs. TAIR 10
Match: AT1G30020.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 11  DAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRFVA 70
           D E Y   ++C  K++ELL    LP GLLPL D+ EVGYN+T GF+W++ + K EH F  
Sbjct: 13  DIESYSDQSLCLDKAKELLALIKLPTGLLPLKDMTEVGYNKTKGFVWMRMRSKIEHTFRE 72

Query: 71  IGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYI 113
           IGR VLYDTE+TAF+E+RR+RRLTGVKSKE    + V+DI+I
Sbjct: 73  IGRRVLYDTEITAFVEDRRMRRLTGVKSKELMIWVPVNDIFI 114

[Close]

BLAST of Carg15009 vs. TAIR 10
Match: AT4G24130.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24
Identity = 51/134 (38.06%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 9   RADAEIYHGDAICKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRF 68
           R  AEI +G   C ++S ELL++   P+G++PL +++E G  R +G++W+KQ    EH F
Sbjct: 13  REGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHFF 72

Query: 69  VAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFFSITVSDIYIDVHNTSRITFGTLTGI 128
            A    V Y  EVTA++++  ++++TGVKSK+ F  + + ++ ++   + +I F T  GI
Sbjct: 73  EATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMGI 132

Query: 129 SKSFPVSAFLIEEE 143
            +SFPV+ F+ EEE
Sbjct: 133 GRSFPVTGFMDEEE 146

The following BLAST results are available for this feature:

BLAST of Carg15009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926669.1	2.7e-76	100.00	uncharacterized protein LOC111433730 [Cucurbita moschata] >KAG6594468.1 hypothet...	[more]
XP_023517978.1	1.3e-75	99.32	uncharacterized protein LOC111781549 [Cucurbita pepo subsp. pepo]	[more]
XP_023003355.1	8.5e-75	98.64	uncharacterized protein LOC111496988 [Cucurbita maxima]	[more]
XP_038882768.1	7.8e-68	89.80	uncharacterized protein LOC120073921 [Benincasa hispida]	[more]
XP_004134915.2	5.0e-67	88.44	uncharacterized protein LOC101215500 [Cucumis sativus] >KGN49395.1 hypothetical ...	[more]

BLAST of Carg15009 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFT7	1.3e-76	100.00	uncharacterized protein LOC111433730 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1KRJ1	4.1e-75	98.64	uncharacterized protein LOC111496988 OS=Cucurbita maxima OX=3661 GN=LOC111496988...	[more]
A0A0A0KI40	2.4e-67	88.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523360 PE=4 SV=1	[more]
A0A1S3AZ86	4.1e-67	89.80	uncharacterized protein LOC103484371 OS=Cucumis melo OX=3656 GN=LOC103484371 PE=...	[more]
A0A5D3CN75	7.1e-67	89.12	DUF538 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Carg15009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46230.1	1.9e-35	48.12	Protein of unknown function, DUF538	[more]
AT1G09310.1	3.0e-33	47.89	Protein of unknown function, DUF538	[more]
AT1G56580.1	3.3e-32	48.51	Protein of unknown function, DUF538	[more]
AT1G30020.1	1.5e-29	56.86	Protein of unknown function, DUF538	[more]
AT4G24130.1	1.9e-24	38.06	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 26..137 e-value: 1.9E-28 score: 99.1
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 5..140
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 6..146 e-value: 2.3E-31 score: 110.3
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 5..141
None	No IPR available	PANTHER	PTHR31676:SF7	OS01G0210600 PROTEIN	coord: 5..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15009-RA	Carg15009-RA	mRNA