Carg14921 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCTGGAGGCAATCAATCAAAGCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGAGAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGGTACCCCCTTTCTTCTTTTTATTACTTGTACATGTTTCGTTTTGCTTTTCTTTTTCTAATTATTTGGGTTGTGGCTTTAACTTTAGTGGTTTTTCATCTCATTGTATGGAAATTCTTTCATTCTCTTCGACTCAATCCACGGCGAATCTCGATATCAAAACTATTTCTATTGGCTAGGTGCTCAATTTGTAGTCCGTTCGTCCCTTCTTATTACAATATTCACTTCTTTTTAATTCTTCATGAATTAGTCTGCATTCCTAGCACTCAGATGTTGTACGATCAAAACGAGAGAGCAGTCAGTGGTGTAGTGTAGGAGGAATGTGGCTCGTTTTTTGAAACTCAACTCTTCTTTTTTAATTCTTTTATCATCTTGTATGTATAAGTCATATTAGTCGTACAGTATGAAGTATTAAAAATGTTCTCTTTTAATAAGCTAGTTATGTTTGTTTTGGTCCTTTCTCTCTGTGATTATGACCCTAAACCTTTGTCATGAAAACTAAAGGAAGCGTAATGCTAAGTGTTGTTATATTGTGCTTTCCTATGAGCTAGAGACTAGATTTTGTTTTTAAAATTTTAGAAGAGTTATGTTTTAAGCTGTTGGATGGGGATGGGGTGTTTTGAGAAGAAATCTGGAGAGGGTCTTTCCAACTCCAATGGTGGCAGCTGCAGAAAACAGAACGAACAATAATAAATCTTCATTACTTGTTGAAACTATTAATTTGAGCTGAGTTGTCCGTAAAAGTAAAGAATATGAAGAGGTTTTGTTGGCTGGCACTCTACTAGGCCTTGAGAATAGAGTTGTTGGATTGGAGGCCCTCATTTATTTGTTTGTTTGTTTGTAATTGCGTGTTACAGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGATACATGGCCTCTCCCAATACTTAACTATATTGTATTAAGTACTAAGTTCAGTGACATTTGGTTAACCCTTCAAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAACCAATTCTAGCACTTTTTTGGCCAAACCCTGTTCCAAGACTTTACGGGAATCCTCATAATTTTG TTCTCTGGAGGCAATCAATCAAAGCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGAGAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGATACATGGCCTCTCCCAATACTTAACTATATTGTATTAAGTACTAAGTTCAGTGACATTTGGTTAACCCTTCAAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAACCAATTCTAGCACTTTTTTGGCCAAACCCTGTTCCAAGACTTTACGGGAATCCTCATAATTTTG ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAG MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDVAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRHI Homology
BLAST of Carg14921 vs. NCBI nr
Match: XP_022926965.1 (uncharacterized protein LOC111433923 [Cucurbita moschata] >XP_023003712.1 uncharacterized protein LOC111497220 [Cucurbita maxima] >XP_023517951.1 uncharacterized protein LOC111781531 [Cucurbita pepo subsp. pepo] >KAG7026380.1 hypothetical protein SDJN02_10379 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg14921 vs. NCBI nr
Match: KAG6594375.1 (hypothetical protein SDJN03_10928, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191.4 bits (485), Expect = 4.4e-45 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg14921 vs. NCBI nr
Match: XP_038877484.1 (uncharacterized protein LOC120069761 [Benincasa hispida]) HSP 1 Score: 173.7 bits (439), Expect = 9.5e-40 Identity = 104/121 (85.95%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of Carg14921 vs. NCBI nr
Match: XP_022978967.1 (uncharacterized protein LOC111478758 [Cucurbita maxima]) HSP 1 Score: 173.7 bits (439), Expect = 9.5e-40 Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of Carg14921 vs. NCBI nr
Match: XP_023544802.1 (uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173.7 bits (439), Expect = 9.5e-40 Identity = 104/121 (85.95%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Carg14921 vs. ExPASy TrEMBL
Match: A0A6J1KND1 (uncharacterized protein LOC111497220 OS=Cucurbita maxima OX=3661 GN=LOC111497220 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg14921 vs. ExPASy TrEMBL
Match: A0A6J1EMJ6 (uncharacterized protein LOC111433923 OS=Cucurbita moschata OX=3662 GN=LOC111433923 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg14921 vs. ExPASy TrEMBL
Match: A0A6J1IMI5 (uncharacterized protein LOC111478758 OS=Cucurbita maxima OX=3661 GN=LOC111478758 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40 Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of Carg14921 vs. ExPASy TrEMBL
Match: A0A6J1EC45 (uncharacterized protein LOC111432982 OS=Cucurbita moschata OX=3662 GN=LOC111432982 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.9e-39 Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of Carg14921 vs. ExPASy TrEMBL
Match: A0A5A7UG11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00140 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.7e-39 Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Carg14921 vs. TAIR 10
Match: AT1G30880.1 (unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 8.1e-13 Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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