Carg14694 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14694
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase RMA3-like
Location	Carg_Chr01: 9780746 .. 9781528 (-)
RNA-Seq Expression	Carg14694
Synteny	Carg14694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAACCTATTCTTCACCTGAGGCATACTTAGAGTCTGAACAAGATGTCTCTCTTAAGCAAAACTGGAAATCTATGTCAGCCCAGTCAACTGTATCCGAAGATGCAAATGGTTGCTTCGATTGCAACATTTGCTTGGACTCTGCAGCTGACCCTGTTGTCACCCTCTGTGGTCACCTCTTCTGCTGGCCCTGCATTTACAAATGGTTTCATGTACAAATCTCCAGCAACGAAACCGAAAACACACACAACTGCCCTGTTTGTAAGGCTAGCATCACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCAAGTCATATTCAGATTCTGAATCCAAGAAGTCTCATTTGGGTATAACCGTACCTCGAAGGCCACCACCGTCCATGAACACCCCGCCCCATTCTAATGCTGCCTCTGCATTGCATCCTAGTGAGGAACTTCATCCAAATTATATCCGCTCGCCATTGCACCGGATCTATCACCAACAATATTTCCCTCAGGCATATGGTAACTTTGCCCCATACGCACCATCTTATCTCGGCAATGCCATGGTAACAAGTCTGCTAAACCCGACGATTGGGTTGATAGGAGAAACGGTTTACACAAGAATTTTTGGTAGTGCAGATGGGAACTTGTTGCCTTACCCGCCTTACAACCACTCGGTCGCAGGGAATGTTGGCACCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAATAGAGTTTCCATCTTTCTATTTTGCTGCTTTATCATCTGTCTTCTGTTGTTTTGA

mRNA sequence

ATGGATCAAACCTATTCTTCACCTGAGGCATACTTAGAGTCTGAACAAGATGTCTCTCTTAAGCAAAACTGGAAATCTATGTCAGCCCAGTCAACTGTATCCGAAGATGCAAATGGTTGCTTCGATTGCAACATTTGCTTGGACTCTGCAGCTGACCCTGTTGTCACCCTCTGTGGTCACCTCTTCTGCTGGCCCTGCATTTACAAATGGTTTCATGTACAAATCTCCAGCAACGAAACCGAAAACACACACAACTGCCCTGTTTGTAAGGCTAGCATCACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCAAGTCATATTCAGATTCTGAATCCAAGAAGTCTCATTTGGGTATAACCGTACCTCGAAGGCCACCACCGTCCATGAACACCCCGCCCCATTCTAATGCTGCCTCTGCATTGCATCCTAGTGAGGAACTTCATCCAAATTATATCCGCTCGCCATTGCACCGGATCTATCACCAACAATATTTCCCTCAGGCATATGGTAACTTTGCCCCATACGCACCATCTTATCTCGGCAATGCCATGGTAACAAGTCTGCTAAACCCGACGATTGGGTTGATAGGAGAAACGGTTTACACAAGAATTTTTGGTAGTGCAGATGGGAACTTGTTGCCTTACCCGCCTTACAACCACTCGGTCGCAGGGAATGTTGGCACCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAATAGAGTTTCCATCTTTCTATTTTGCTGCTTTATCATCTGTCTTCTGTTGTTTTGA

Coding sequence (CDS)

ATGGATCAAACCTATTCTTCACCTGAGGCATACTTAGAGTCTGAACAAGATGTCTCTCTTAAGCAAAACTGGAAATCTATGTCAGCCCAGTCAACTGTATCCGAAGATGCAAATGGTTGCTTCGATTGCAACATTTGCTTGGACTCTGCAGCTGACCCTGTTGTCACCCTCTGTGGTCACCTCTTCTGCTGGCCCTGCATTTACAAATGGTTTCATGTACAAATCTCCAGCAACGAAACCGAAAACACACACAACTGCCCTGTTTGTAAGGCTAGCATCACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCAAGTCATATTCAGATTCTGAATCCAAGAAGTCTCATTTGGGTATAACCGTACCTCGAAGGCCACCACCGTCCATGAACACCCCGCCCCATTCTAATGCTGCCTCTGCATTGCATCCTAGTGAGGAACTTCATCCAAATTATATCCGCTCGCCATTGCACCGGATCTATCACCAACAATATTTCCCTCAGGCATATGGTAACTTTGCCCCATACGCACCATCTTATCTCGGCAATGCCATGGTAACAAGTCTGCTAAACCCGACGATTGGGTTGATAGGAGAAACGGTTTACACAAGAATTTTTGGTAGTGCAGATGGGAACTTGTTGCCTTACCCGCCTTACAACCACTCGGTCGCAGGGAATGTTGGCACCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAATAGAGTTTCCATCTTTCTATTTTGCTGCTTTATCATCTGTCTTCTGTTGTTTTGA

Protein sequence

MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Homology

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BLAST of Carg14694 vs. NCBI nr
Match: XP_023521850.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >KAG6607875.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037404.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.3 bits (1388), Expect = 1.9e-149
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
           TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
Sbjct: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

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BLAST of Carg14694 vs. NCBI nr
Match: XP_022940316.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita moschata])

HSP 1 Score: 531.6 bits (1368), Expect = 3.9e-147
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           LFCWPCIYKWFHVQISS ETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI
Sbjct: 61  LFCWPCIYKWFHVQISSIETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
           TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
Sbjct: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNAMVTSLLNPTIGLIGETVYTRIFGSADG+LLPYPPYNH VAGNVGTRMRRQEMQLDK
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGSLLPYPPYNHLVAGNVGTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

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BLAST of Carg14694 vs. NCBI nr
Match: XP_022981299.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita maxima])

HSP 1 Score: 522.7 bits (1345), Expect = 1.8e-144
Identity = 252/260 (96.92%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           MDQTYS+ EAYLESE DVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MDQTYSASEAYLESEHDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           LFCWPCIYKWFHVQISSNETENTHNCPVCKASIT SSLVPLYGRG S SDSESKKSHLGI
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITLSSLVPLYGRGMSNSDSESKKSHLGI 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
           T+PRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
Sbjct: 121 TIPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGN+GTRMRRQEMQLDK
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNIGTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

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BLAST of Carg14694 vs. NCBI nr
Match: XP_038899693.1 (E3 ubiquitin-protein ligase RMA3 [Benincasa hispida])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 226/264 (85.61%), Postives = 241/264 (91.29%), Query Frame = 0


Query: 1   MDQTYSSP----EAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVT 60
           M+Q YS P    EAYLESEQDVSLKQNWKS+S QSTVSEDANGCFDCNICLDSAA+PVVT
Sbjct: 1   MEQNYSVPHSVSEAYLESEQDVSLKQNWKSISTQSTVSEDANGCFDCNICLDSAAEPVVT 60

Query: 61  LCGHLFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKS 120
           LCGHL+CWPCIYKW HVQISSN  ENT NCPVCKASITPSSLVPLYGRG S SDSESKKS
Sbjct: 61  LCGHLYCWPCIYKWLHVQISSNRPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKS 120

Query: 121 HLGITVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPY 180
           HLG+ VPRRPPPSMNTPPHSNA SALHPS+ELHPNY+RSP H IYHQQYFPQAYG+FA Y
Sbjct: 121 HLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPNYVRSPSHPIYHQQYFPQAYGDFASY 180

Query: 181 APSYLGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEM 240
           APSYLGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPYPPYN+++ GN  TRMRRQEM
Sbjct: 181 APSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNAIPGNASTRMRRQEM 240

Query: 241 QLDKSLNRVSIFLFCCFIICLLLF 261
           QLDKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 QLDKSLNRVSIFLFCCFIICLLLF 264

[Close]

BLAST of Carg14694 vs. NCBI nr
Match: XP_008452467.1 (PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa] >TYK20251.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 224/260 (86.15%), Postives = 241/260 (92.69%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           M+Q YS PEAYLESEQDVSLKQNWKS+S +ST+SEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVPLYGRG S SDSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
            VPRRPPPSMNTPP SN++SA +PS+ELH NYIRSP H IYHQQYFPQAYGNFA YAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPYPPYN+S++GN  TRMRRQEMQLDK
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Carg14694 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.8e-47
Identity = 114/247 (46.15%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 21  KQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISS-NE 80
           KQ     +A +    + +GCFDCNICLD+A DPVVTLCGHLFCWPCIYKW HVQ+SS + 
Sbjct: 22  KQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSV 81

Query: 81  TENTHNCPVCKASITPSSLVPLYGRGKSYSDS---ESKKSHLGITVPRRPPPSMNTPPHS 140
            ++ +NCPVCK++IT +SLVPLYGRG S   S     K+  L   +PRRP PS    P  
Sbjct: 82  DQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNP-I 141

Query: 141 NAASALHPS---EELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPT 200
            +AS+L+PS   + L P++        ++ QY P+    F     + L NA++ S L P 
Sbjct: 142 TSASSLNPSLQHQTLSPSF--------HNHQYSPR---GFTTTESTDLANAVMMSFLYPV 201

Query: 201 IGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCF 260
           IG+ G+ VYTRIFG+    +    PY             ++ MQ +KSLNRVSIF  CC 
Sbjct: 202 IGMFGDLVYTRIFGTFTNTIA--QPY-----------QSQRMMQREKSLNRVSIFFLCCI 243

[Close]

BLAST of Carg14694 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-43
Identity = 104/248 (41.94%), Postives = 145/248 (58.47%), Query Frame = 0


Query: 24  WKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQ--ISSNETE 83
           WKSM+ +  V E+ +G FDCNICLD   +PV+TLCGHL+CWPCIYKW + Q   S N  +
Sbjct: 24  WKSMNDE--VEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQ 83

Query: 84  NTHNCPVCKASITPSSLVPLYGR-GKSYSDSESKKSHLGITVPRRPPPSMNTPPHSNAAS 143
               CPVCKA ++  +L+PLYGR G+S   SE K  +LGI +P+R PPS     H     
Sbjct: 84  QQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQR-PPSPRCGGH----- 143

Query: 144 ALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNP-------- 203
            L P+ + +P+ +     R Y QQ   +         P+Y G+ M + +L+P        
Sbjct: 144 FLLPTTDSNPSQLLQ--RRGYQQQSQTR--------QPAYQGSYMSSPMLSPGGATANML 203

Query: 204 TIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCC 261
              +IGE  Y RIFG++   +  Y P ++++A +   RMRRQ  Q D+SL R+  FLFCC
Sbjct: 204 QHSMIGEVAYARIFGNSSTTMYTY-PNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCC 252

[Close]

BLAST of Carg14694 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.6e-40
Identity = 101/240 (42.08%), Postives = 145/240 (60.42%), Query Frame = 0


Query: 26  SMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQ--ISSNETENT 85
           ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHLFCWPCI+KW  VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  HNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPP---SMNTPPHSNAAS 145
             CPVCK+ ++ S+LVPLYGRG+  +  E K S     VP+RP      +  P    A++
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 ALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGET 205
            L  S+ +H N   SP      + Y+P + G  +  + SY      +++L+P + ++GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 261
           V TR+FG+   +   YP   +++AG  G RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 213 VATRLFGTRVMDRFAYPD-TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg14694 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.4e-29
Identity = 82/236 (34.75%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 32  TVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISSNETENTHN------ 91
           T   D+ G FDCNICLD   DPVVTLCGHLFCWPCI+KW +   +S +  + ++      
Sbjct: 10  TTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPP 69

Query: 92  -CPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPPSMNTPPHSNAASALHP 151
            CPVCK+ ++ ++LVP+YGRG+       K    G  VP RP     T P          
Sbjct: 70  KCPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRP-----TGP---------- 129

Query: 152 SEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGETVYTR 211
                          +Y  +   Q  G        Y        + +P +G++ E VY R
Sbjct: 130 ---------------VYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRR 189

Query: 212 IFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 261
           +FG +  N+ PY   N         R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 190 LFGESSSNMAPYRDMN--------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Carg14694 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 31  STVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISSNETENTHNCPVCK 90
           S+ ++D +  F+CNICLD+A D VV+LCGHLFCWPC+ +W   +       N   CPVCK
Sbjct: 14  SSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTR------PNNQVCPVCK 73

Query: 91  ASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPPSMNTPPHSNAA 140
           ++I  + +VP+YGRG   SD   K       VP RP    + PP  + A
Sbjct: 74  SAIDGNKVVPIYGRGGDSSDPRKK-------VPPRPKGQRSEPPPQSFA 109

[Close]

BLAST of Carg14694 vs. ExPASy TrEMBL
Match: A0A6J1FI46 (E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita moschata OX=3662 GN=LOC111445968 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           LFCWPCIYKWFHVQISS ETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI
Sbjct: 61  LFCWPCIYKWFHVQISSIETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
           TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
Sbjct: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNAMVTSLLNPTIGLIGETVYTRIFGSADG+LLPYPPYNH VAGNVGTRMRRQEMQLDK
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGSLLPYPPYNHLVAGNVGTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Carg14694 vs. ExPASy TrEMBL
Match: A0A6J1J1I0 (E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita maxima OX=3661 GN=LOC111480472 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 8.8e-145
Identity = 252/260 (96.92%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           MDQTYS+ EAYLESE DVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MDQTYSASEAYLESEHDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           LFCWPCIYKWFHVQISSNETENTHNCPVCKASIT SSLVPLYGRG S SDSESKKSHLGI
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITLSSLVPLYGRGMSNSDSESKKSHLGI 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
           T+PRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
Sbjct: 121 TIPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGN+GTRMRRQEMQLDK
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNIGTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Carg14694 vs. ExPASy TrEMBL
Match: A0A5A7VD79 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003900 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 224/260 (86.15%), Postives = 241/260 (92.69%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           M+Q YS PEAYLESEQDVSLKQNWKS+S +ST+SEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVPLYGRG S SDSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
            VPRRPPPSMNTPP SN++SA +PS+ELH NYIRSP H IYHQQYFPQAYGNFA YAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPYPPYN+S++GN  TRMRRQEMQLDK
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Carg14694 vs. ExPASy TrEMBL
Match: A0A1S3BTX0 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 224/260 (86.15%), Postives = 241/260 (92.69%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           M+Q YS PEAYLESEQDVSLKQNWKS+S +ST+SEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVPLYGRG S SDSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180
            VPRRPPPSMNTPP SN++SA +PS+ELH NYIRSP H IYHQQYFPQAYGNFA YAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDK 240
           LGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPYPPYN+S++GN  TRMRRQEMQLDK
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLDK 240

Query: 241 SLNRVSIFLFCCFIICLLLF 261
           SLNRVSIFLFCCFIICLLLF
Sbjct: 241 SLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Carg14694 vs. ExPASy TrEMBL
Match: A0A0A0KZN0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.5e-128
Identity = 223/261 (85.44%), Postives = 240/261 (91.95%), Query Frame = 0


Query: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60
           M+Q YS PEAYLESEQDVSLKQNWKS+S QST+SEDANGCFDCNICLDSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVPLYGRG S SDSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQA-YGNFAPYAPS 180
            VPRRPPPSMNTP HSN++S L+PS+ELH NYIRSP H IYHQQYFPQA YGNFA Y+PS
Sbjct: 121 AVPRRPPPSMNTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSPS 180

Query: 181 YLGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLD 240
           YLGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPY PYN+S++GN  TRMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of Carg14694 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-48
Identity = 114/247 (46.15%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 21  KQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISS-NE 80
           KQ     +A +    + +GCFDCNICLD+A DPVVTLCGHLFCWPCIYKW HVQ+SS + 
Sbjct: 22  KQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSV 81

Query: 81  TENTHNCPVCKASITPSSLVPLYGRGKSYSDS---ESKKSHLGITVPRRPPPSMNTPPHS 140
            ++ +NCPVCK++IT +SLVPLYGRG S   S     K+  L   +PRRP PS    P  
Sbjct: 82  DQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNP-I 141

Query: 141 NAASALHPS---EELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPT 200
            +AS+L+PS   + L P++        ++ QY P+    F     + L NA++ S L P 
Sbjct: 142 TSASSLNPSLQHQTLSPSF--------HNHQYSPR---GFTTTESTDLANAVMMSFLYPV 201

Query: 201 IGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCF 260
           IG+ G+ VYTRIFG+    +    PY             ++ MQ +KSLNRVSIF  CC 
Sbjct: 202 IGMFGDLVYTRIFGTFTNTIA--QPY-----------QSQRMMQREKSLNRVSIFFLCCI 243

[Close]

BLAST of Carg14694 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-41
Identity = 101/240 (42.08%), Postives = 145/240 (60.42%), Query Frame = 0


Query: 26  SMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQ--ISSNETENT 85
           ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHLFCWPCI+KW  VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  HNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPP---SMNTPPHSNAAS 145
             CPVCK+ ++ S+LVPLYGRG+  +  E K S     VP+RP      +  P    A++
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 ALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGET 205
            L  S+ +H N   SP      + Y+P + G  +  + SY      +++L+P + ++GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 261
           V TR+FG+   +   YP   +++AG  G RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 213 VATRLFGTRVMDRFAYPD-TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg14694 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-41
Identity = 101/240 (42.08%), Postives = 145/240 (60.42%), Query Frame = 0


Query: 26  SMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQ--ISSNETENT 85
           ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHLFCWPCI+KW  VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  HNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPP---SMNTPPHSNAAS 145
             CPVCK+ ++ S+LVPLYGRG+  +  E K S     VP+RP      +  P    A++
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 ALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGET 205
            L  S+ +H N   SP      + Y+P + G  +  + SY      +++L+P + ++GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 261
           V TR+FG+   +   YP   +++AG  G RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 213 VATRLFGTRVMDRFAYPD-TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of Carg14694 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30
Identity = 82/236 (34.75%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 32  TVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISSNETENTHN------ 91
           T   D+ G FDCNICLD   DPVVTLCGHLFCWPCI+KW +   +S +  + ++      
Sbjct: 10  TTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPP 69

Query: 92  -CPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPPPSMNTPPHSNAASALHP 151
            CPVCK+ ++ ++LVP+YGRG+       K    G  VP RP     T P          
Sbjct: 70  KCPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRP-----TGP---------- 129

Query: 152 SEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSYLGNAMVTSLLNPTIGLIGETVYTR 211
                          +Y  +   Q  G        Y        + +P +G++ E VY R
Sbjct: 130 ---------------VYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRR 189

Query: 212 IFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 261
           +FG +  N+ PY   N         R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 190 LFGESSSNMAPYRDMN--------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Carg14694 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-26
Identity = 61/121 (50.41%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 26  SMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGHLFCWPCIYKWFHVQISSNETENTHN 85
           S S+ +  + + +  F+CNICLD A DP+VTLCGHLFCWPC+YKW H+   S +      
Sbjct: 6   SCSSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD------ 65

Query: 86  CPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGITVPRRPP---PSMNTPPHSNAASAL 144
           CPVCKA I    LVPLYGRGKS +D  S KS  G+ VP RP    P    PP  N   A 
Sbjct: 66  CPVCKAVIEEDRLVPLYGRGKSSADPRS-KSIPGLEVPNRPSGQRPETAQPPDPNHGFAH 119

The following BLAST results are available for this feature:

BLAST of Carg14694 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521850.1	1.9e-149	100.00	E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858...	[more]
XP_022940316.1	3.9e-147	98.85	E3 ubiquitin-protein ligase RMA3-like [Cucurbita moschata]	[more]
XP_022981299.1	1.8e-144	96.92	E3 ubiquitin-protein ligase RMA3-like [Cucurbita maxima]	[more]
XP_038899693.1	1.6e-129	85.61	E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]	[more]
XP_008452467.1	2.1e-129	86.15	PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiq...	[more]

BLAST of Carg14694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUK7	2.8e-47	46.15	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
Q6R567	4.2e-43	41.94	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	5.6e-40	42.08	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	3.4e-29	34.75	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q09463	2.1e-18	43.12	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]

BLAST of Carg14694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FI46	1.9e-147	98.85	E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]
A0A6J1J1I0	8.8e-145	96.92	E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita maxima OX=3661 GN=LOC11148047...	[more]
A0A5A7VD79	1.0e-129	86.15	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BTX0	1.0e-129	86.15	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV...	[more]
A0A0A0KZN0	7.5e-128	85.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 P...	[more]

BLAST of Carg14694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	2.0e-48	46.15	RING membrane-anchor 3	[more]
AT4G03510.1	4.0e-41	42.08	RING membrane-anchor 1	[more]
AT4G03510.2	4.0e-41	42.08	RING membrane-anchor 1	[more]
AT4G28270.1	2.4e-30	34.75	RING membrane-anchor 2	[more]
AT1G19310.1	3.6e-26	50.41	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..89 e-value: 4.1E-10 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 43..90 score: 13.271187
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 3..104 e-value: 2.1E-18 score: 68.1
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 43..89 e-value: 1.7E-8 score: 34.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..142
None	No IPR available	PANTHER	PTHR12313:SF69	E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE	coord: 3..260
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 41..91 e-value: 1.29387E-24 score: 90.8263
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 23..96
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 3..260
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14694-RA	Carg14694-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity