Carg14660 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14660
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B-box type zinc finger family protein
Location	Carg_Chr18: 1913413 .. 1913763 (+)
RNA-Seq Expression	Carg14660
Synteny	Carg14660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAAGTGTGAGCTTTGCACTTCAAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCCATGGATATCGTCATGACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCAAGCTCGTCAAAATGA

mRNA sequence

ATGAAGAAGAAGTGTGAGCTTTGCACTTCAAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCCATGGATATCGTCATGACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCAAGCTCGTCAAAATGA

Coding sequence (CDS)

ATGAAGAAGAAGTGTGAGCTTTGCACTTCAAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCCATGGATATCGTCATGACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCAAGCTCGTCAAAATGA

Protein sequence

MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK

Homology

[Close]

BLAST of Carg14660 vs. NCBI nr
Match: KAG6573228.1 (putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012401.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.0 bits (624), Expect = 3.3e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK 116

[Close]

BLAST of Carg14660 vs. NCBI nr
Match: XP_023542180.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57
Identity = 113/117 (96.58%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHD-DNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSS GYR D DNDDDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117

[Close]

BLAST of Carg14660 vs. NCBI nr
Match: XP_022994111.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKKKCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATG
Sbjct: 1   MKKKCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSS GYR   DDN+DDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDDDDNNDDENQVVPLSPPPVSSSSK 118

[Close]

BLAST of Carg14660 vs. NCBI nr
Match: XP_022954438.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDS        +DD+E QVVPLSP PVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSG-------DDDEEYQVVPLSPLPVSSSSK 109

[Close]

BLAST of Carg14660 vs. NCBI nr
Match: KAE8652697.1 (hypothetical protein Csa_014317 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35
Identity = 80/120 (66.67%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63
           KCELC  RAN YCESD+++LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 145 KCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 204

Query: 64  SPTISVCQSCLNAQN--NVADNHQDSSHG--------YRHDDNDDDENQVVPLSPPPVSS 114
            PT+S+CQ C+  QN  ++   HQD  H           H + DD+ENQVVPLSPPPVSS
Sbjct: 205 GPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPPPVSS 264

[Close]

BLAST of Carg14660 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Carg14660 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 1  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTA 60
          M+ +C+ C T +A  YC+SD A LC +CD NVHSAN + ++H+R+LLC  C   PT    
Sbjct: 1  MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPT---- 60

Query: 61 TGRKLSPTISVCQSC 74
              ++  +S+CQ C
Sbjct: 61 AVHCMNENVSLCQGC 71

[Close]

BLAST of Carg14660 vs. ExPASy Swiss-Prot
Match: Q9LJ44 (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60
          M+ KC+ C TS+A  YC+SD A LC +CD +VHSAN +  +H R+L+C  C S     A 
Sbjct: 1  MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQ---PAA 60

Query: 61 GRKLSPTISVCQSCLNAQNNVAD 83
           R L   +S CQ C   ++N ++
Sbjct: 61 IRCLDEKVSYCQGCHWHESNCSE 80

[Close]

BLAST of Carg14660 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD NVHSAN + ++HSRTL+C  C +     A+ R  
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQ---PASVRCS 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSSHGYRHDDN 97
             +S+CQ+C +   +   N   +SH  R   N
Sbjct: 65 DERVSLCQNC-DWSGHDGKNSTTTSHHKRQTIN 93

[Close]

BLAST of Carg14660 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-08
Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 3   KKCELCTSRANT-YCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATG 62
           + C+ C S A T YC +D A LC SCDA VHSAN +  +H R  +C  C+ +P  +    
Sbjct: 18  RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77

Query: 63  RKLSPTISVCQSCLNAQNNVADNHQ 86
              S   + C S +++ N +A  HQ
Sbjct: 78  DDAS-LCTACDSEVHSANPLARRHQ 101

[Close]

BLAST of Carg14660 vs. ExPASy TrEMBL
Match: A0A6J1JY69 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489941 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKKKCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATG
Sbjct: 1   MKKKCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSS GYR   DDN+DDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDDDDNNDDENQVVPLSPPPVSSSSK 118

[Close]

BLAST of Carg14660 vs. ExPASy TrEMBL
Match: A0A6J1GR34 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111456702 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.3e-51
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDS        +DD+E QVVPLSP PVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSG-------DDDEEYQVVPLSPLPVSSSSK 109

[Close]

BLAST of Carg14660 vs. ExPASy TrEMBL
Match: A0A0A0LS80 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.7e-36
Identity = 80/120 (66.67%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63
           KCELC  RAN YCESD+++LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 5   KCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 64

Query: 64  SPTISVCQSCLNAQN--NVADNHQDSSHG--------YRHDDNDDDENQVVPLSPPPVSS 114
            PT+S+CQ C+  QN  ++   HQD  H           H + DD+ENQVVPLSPPPVSS
Sbjct: 65  GPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPPPVSS 124

[Close]

BLAST of Carg14660 vs. ExPASy TrEMBL
Match: A0A5A7UTR2 (B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00230 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.4e-35
Identity = 79/123 (64.23%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63
           KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 23  KCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82

Query: 64  SPTISVCQSCLNAQN--NVADNHQDSSHG----------YRHDDNDDDENQVVPLSPPPV 115
            PT+S+CQ C+  QN  ++  +HQD  H             H   DD+ENQVVPLSPPP 
Sbjct: 83  GPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRHHHSGDDEENQVVPLSPPPP 142

[Close]

BLAST of Carg14660 vs. ExPASy TrEMBL
Match: A0A1S3B4I3 (B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.4e-35
Identity = 79/123 (64.23%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63
           KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 23  KCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82

Query: 64  SPTISVCQSCLNAQN--NVADNHQDSSHG----------YRHDDNDDDENQVVPLSPPPV 115
            PT+S+CQ C+  QN  ++  +HQD  H             H   DD+ENQVVPLSPPP 
Sbjct: 83  GPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRHHHSGDDEENQVVPLSPPPP 142

[Close]

BLAST of Carg14660 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 66/139 (47.48%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 2   KKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGR 61
           KKKCELC   A  YCESDQA+LCW CD  VH ANF+V KH R LLC  CQS TPW A+G 
Sbjct: 3   KKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGL 62

Query: 62  KLSPTISVCQSCL----NAQNNVADNHQ------------DSSHGYRHDDNDDD-----E 116
            L PT+S+C+SCL    N  +++A   Q            D +  Y  + ++D+     E
Sbjct: 63  NLGPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVE 122

[Close]

BLAST of Carg14660 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 111.3 bits (277), Expect = 5.2e-25
Identity = 68/169 (40.24%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           M KKC+LC   A  YCESDQA+LCW CD  VH ANF+V KH+R LLC  CQS TPW ATG
Sbjct: 1   MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG 60

Query: 61  RKLSPTISVCQSCL-----------------------------------------NAQNN 116
            +L PT SVC+SC+                                         +A++ 
Sbjct: 61  LRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESY 120

[Close]

BLAST of Carg14660 vs. TAIR 10
Match: AT3G07650.1 (CONSTANS-like 9 )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Carg14660 vs. TAIR 10
Match: AT3G07650.2 (CONSTANS-like 9 )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Carg14660 vs. TAIR 10
Match: AT3G07650.3 (CONSTANS-like 9 )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

The following BLAST results are available for this feature:

BLAST of Carg14660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573228.1	3.3e-61	100.00	putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma s...	[more]
XP_023542180.1	2.8e-57	96.58	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994111.1	2.7e-55	94.07	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima]	[more]
XP_022954438.1	1.5e-50	89.66	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata]	[more]
KAE8652697.1	1.4e-35	66.67	hypothetical protein Csa_014317 [Cucumis sativus]	[more]

BLAST of Carg14660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSE5	1.2e-10	42.35	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1...	[more]
O23379	4.6e-10	42.67	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LJ44	1.8e-09	42.17	Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE...	[more]
Q9LUA9	1.1e-08	39.78	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q39057	7.4e-08	37.65	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of Carg14660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JY69	1.3e-55	94.07	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GR34	7.3e-51	89.66	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LS80	6.7e-36	66.67	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 ...	[more]
A0A5A7UTR2	7.4e-35	64.23	B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4I3	7.4e-35	64.23	B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 S...	[more]

BLAST of Carg14660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54470.1	3.6e-26	47.48	B-box type zinc finger family protein	[more]
AT4G27310.1	5.2e-25	40.24	B-box type zinc finger family protein	[more]
AT3G07650.1	8.7e-12	42.35	CONSTANS-like 9	[more]
AT3G07650.2	8.7e-12	42.35	CONSTANS-like 9	[more]
AT3G07650.3	8.7e-12	42.35	CONSTANS-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..46 e-value: 2.5E-6 score: 37.0
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 3..43 e-value: 2.0E-6 score: 27.9
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..46 score: 8.730886
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..116
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..115
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14660-RA	Carg14660-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding