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Carg14647 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCCCCGACTGCCAGCGTTTGAGGATCGCCGGAACGCCATTTGCAATCCACTGGGAGCAGCGAAGATTCTTGATTGATACCTTTTGAGAGTAATTTATCTTTCAGAGGTACAATTTTCTTCGTGATTTTTCTCCGAAATGAGTTTGTTGGATTTATTGTAAGTTTTCGACCAGTCTTTTTTGTTCGTCTCTCTAAATTTAGTGGAATTAGGGCCTAATTCCTTAATCAGATTTGTTCTCTGTCGTTCCATTTTTGTTCTTGGGAGCTTGAGAGTAGTATTTGGAGTAAGCTAGTGTTTGTAATAGCGTCGGATTATGATATCAGTAATCGGATTTTCTTTTCTTTTTTTAATCTCAGATTTCTTCTAGGTGAGTTTGCGGTTTTGATTGTGTATAAATCGATGGATTTGAAGGCAGCGCACTGATGTCATTGTTCTGGATTGTGATTCGTCAATTTGCAGAAAACGAAGCGATGGTATATGACTTCACACGCACATTCTTGATTGCATAATCAAACAACAGCCTTTTGTTTTTTATTCTAGTTTAGTGTTCTTTTAAGGAAGTGAATTTAGAGTTCACCACTGAAAGGGCTACAGATCTTTCAATCAAGATTCTTTCTTCAGGATAGGTTTATAGTTTGTTATAATTCTTTTCCCCCCATAATATGATTCGGCCTTTACTTTACTCTCTCAGGCCACGTCAAAGAAAGTTATTACAAGGGAAGAGTGGGAGAAGAAGCTTAACGACGTGAAGATTAGGAAAGAAGACATGAATAAATTGGTAATGAATTTCCTTGTCACTGAAGGTTATGTTGATGCAGCTGAGAAATTCCGGATGGAGTCTGGGGCTGAGCGTATCCATTAGTTAATTCAGTAACTAAGGCCCTCTTTTCATTTTTGTTTATGTGGAATGTTGATTTATGTGGTGTTCTTGAGATTTGCCTTTCTATTTGCTTCTCCTTATGGATATATAGCAGAAATCGATCTTGCAACCATAACAGATAGAATGGCCGTCAAGAAGGCTGTACAATGCGGTAATGTTGAGGATGCAATTGAGAAAGTGAATGATTTGAATCCCGAGGTTTGATTCCTACACTAAATACTTTGTTTGGTGGTTAGAATAGATGTTCATCAAGATTTTTAGTAATACTCTGCAGCCTTTTGTTATGTTCTCTTTGTGCACATACCCGGAACATGAAAATATTTAACTGCTGTTGGCTTCTTGTGATGAATATTCTTAATTTCACTTGGAAATTTGAGTGTTTTATGACATTTTATATGCTATAGACCAGCTAGCAATCAAAGTTCTTTACGTACTTACCGCCTTCCCTGTCTTTGTAATTTTCATGTTCATTGAACCAAATCTTGTGTGTACTTGTGATATTAGATGCTAGTGGTCTCTTTAGCATCTACTCATGGTATATAGCTTGATGAACTGATGACACAGGTTTTAATGATCGATTAAGAAATTATCAATAAGATTTTCTTCTTTTTCCTTCCTTTCTGAGGATGTGATTTCACTCCATTTGTGGTTTGAGCCTAAGTGATCTTTTGAGTCGTAGATATGTATGGAATGAGAAGTTGGATTCCCAATCATCTTATCGAACAATAATAACTTTTTTAAAGAAAGGAAAATAGTAGTACACACGCACGGAACGAATAAATATCATTCGTTGCTATCATGGCAGCTATCTGATTAAGTTTGATATGGTAACTGGAAAATAGTTGGATATTGTTGGTTTGATGTTCCCTCTTCAGTTCTTGATGTTATGTTATCTAAACACACATCTAAAGTAAATTCTCTTGCAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTCCAACAGCAAAGATTGATCGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAGTTTGCTCAGGAGGAGCTTGCACCAAGGGGAGAAGAAAATGTAATTTATGTGGCTTTCACTTTCCACCTTTCTATCATCATATTGTAGCTTATGATAGATCAATGAAGTATATAAATGCTTATTGTACTCGTTGACATTTGAAATGTTTTGTGTACACTTCAACTATGGATTTCCCTTCACCTTCACCTGCTCTCCAAAGTAACCCTTTTTACTTCTTTCAGCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTTGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTGGACATCTCTCAGCGCCTGAAGACAGCAAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGTCATGAAAAAGGTTAAAATTCTTGCCACCATTTGCATTTGAAGTGCCTAACATTAAAATAGTATTCTTTCCTACTTGAGAAATGCTGCTAGATCTCTGCCATGTCCAATAATAACACCATGGCAATGAGAATTGAACCTTTGGTTAATATCAGTGCTAGAACAAAATCATTGATTTTGATCTCAACTCTAACGGAGACATGATAATATTTTGAGTAAGCAGGCGCATCAATGGCAGACCAAAAGAAGTCAAGAACAGTCTAGTTTTGACCTGCAACCTGATTTAGTGTACTTATGGCTAACAAATTACGATTTGTTGTCGTTCTACAGATCCAAAGCTGCCAAGCTTGTTGAAGATGTTAATGTGGGCACAGGACCAACTCGATGAGAAAGCAGCATATCCTCGCATCAATGATTTATCCACGGCTATGCTTGAAGATCCTCCTATTTGAATACGTCTTCCAAAAGAACGGTGAAAGAGATTTCTCAGCGTGTTTGATCGGAAGAAAAATAAAATCACGTAGGTTGATCATTTGTAGTTTCCTTCTTGTCTTTCATCATCTTCGTTTTAGAATTTCCTTAGTTACATTACTGGCCTCAAATGCTAAGATGGTTGTGTACAAAAGATTATCAAACCTTTATTCTTCAAGTGTCAAATTGTGTGCAACATGTTTGTCCCGCTCACCTTCCTCACCTTACTTAGAATCTTACAATAATACAACCAAAATCCTTCCCATTTAGGCAGTGAAATGAAAAGAATGATGAGAAGGAAACAAGCTATGTACATGGCGAAATTGTAAGGATTGCCACAATTCTGAAGTGTTCATATTTGGATGCATCATCAAGAATATCCTCGCTGATTTTGGTGTGCCCATCATCAAAATTAAGAGCATAGCTACTAGGATCGTACTGAAACCTTAGTGGCCGCTTGCTTCCATTCTTGATGACCTTCTTTAAAGCCGCCCTCACC AACTCCCCGACTGCCAGCGTTTGAGGATCGCCGGAACGCCATTTGCAATCCACTGGGAGCAGCGAAGATTCTTGATTGATACCTTTTGAGAGTAATTTATCTTTCAGAGATTTCTTCTAGGTGAGTTTGCGGTTTTGATTGTGTATAAATCGATGGATTTGAAGGCAGCGCACTGATGTCATTGTTCTGGATTGTGATTCGTCAATTTGCAGAAAACGAAGCGATGGCCACGTCAAAGAAAGTTATTACAAGGGAAGAGTGGGAGAAGAAGCTTAACGACGTGAAGATTAGGAAAGAAGACATGAATAAATTGGTAATGAATTTCCTTGTCACTGAAGGTTATGTTGATGCAGCTGAGAAATTCCGGATGGAGTCTGGGGCTGAGCCAGAAATCGATCTTGCAACCATAACAGATAGAATGGCCGTCAAGAAGGCTGTACAATGCGGTAATGTTGAGGATGCAATTGAGAAAGTGAATGATTTGAATCCCGAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTCCAACAGCAAAGATTGATCGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAGTTTGCTCAGGAGGAGCTTGCACCAAGGGGAGAAGAAAATCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTTGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTGGACATCTCTCAGCGCCTGAAGACAGCAAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGTCATGAAAAAGATCCAAAGCTGCCAAGCTTGTTGAAGATGTTAATGTGGGCACAGGACCAACTCGATGAGAAAGCAGCATATCCTCGCATCAATGATTTATCCACGGCTATGCTTGAAGATCCTCCTATTTGAATACGTCTTCCAAAAGAACGGTGAAAGAGATTTCTCAGCGTGTTTGATCGGAAGAAAAATAAAATCACGTAGGTTGATCATTTGTAGTTTCCTTCTTGTCTTTCATCATCTTCGTTTTAGAATTTCCTTAGTTACATTACTGGCCTCAAATGCTAAGATGGTTGTGTACAAAAGATTATCAAACCTTTATTCTTCAAGTGTCAAATTGTGTGCAACATGTTTGTCCCGCTCACCTTCCTCACCTTACTTAGAATCTTACAATAATACAACCAAAATCCTTCCCATTTAGGCAGTGAAATGAAAAGAATGATGAGAAGGAAACAAGCTATGTACATGGCGAAATTGTAAGGATTGCCACAATTCTGAAGTGTTCATATTTGGATGCATCATCAAGAATATCCTCGCTGATTTTGGTGTGCCCATCATCAAAATTAAGAGCATAGCTACTAGGATCGTACTGAAACCTTAGTGGCCGCTTGCTTCCATTCTTGATGACCTTCTTTAAAGCCGCCCTCACC ATGTCATTGTTCTGGATTGTGATTCGTCAATTTGCAGAAAACGAAGCGATGGCCACGTCAAAGAAAGTTATTACAAGGGAAGAGTGGGAGAAGAAGCTTAACGACGTGAAGATTAGGAAAGAAGACATGAATAAATTGGTAATGAATTTCCTTGTCACTGAAGGTTATGTTGATGCAGCTGAGAAATTCCGGATGGAGTCTGGGGCTGAGCCAGAAATCGATCTTGCAACCATAACAGATAGAATGGCCGTCAAGAAGGCTGTACAATGCGGTAATGTTGAGGATGCAATTGAGAAAGTGAATGATTTGAATCCCGAGATATTGGATACAAATCCCCAATTGTTTTTTCATCTCCAACAGCAAAGATTGATCGAACTAATTCGTAATGGAAAAGTAGAAGAAGCTCTTGAGTTTGCTCAGGAGGAGCTTGCACCAAGGGGAGAAGAAAATCAAAGCTTCTTGGAAGAGTTGGAGAGAACAGTTGCTTTACTTGCTTTTGAAGATGTTTCCAACTGTCCGGTGCGAGACCTTCTGGACATCTCTCAGCGCCTGAAGACAGCAAGTGAAGTTAATGCAGCCATCTTAACAAGTCAGAGTCATGAAAAAGATCCAAAGCTGCCAAGCTTGTTGAAGATGTTAATGTGGGCACAGGACCAACTCGATGAGAAAGCAGCATATCCTCGCATCAATGATTTATCCACGGCTATGCTTGAAGATCCTCCTATTTGA MSLFWIVIRQFAENEAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRMESGAEPEIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVRDLLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLMWAQDQLDEKAAYPRINDLSTAMLEDPPI Homology
BLAST of Carg14647 vs. NCBI nr
Match: XP_022954757.1 (protein GID8 homolog [Cucurbita moschata] >XP_022954758.1 protein GID8 homolog [Cucurbita moschata] >XP_022994456.1 protein GID8 homolog [Cucurbita maxima] >XP_022994457.1 protein GID8 homolog [Cucurbita maxima] >XP_022994458.1 protein GID8 homolog [Cucurbita maxima] >XP_023542747.1 protein GID8 homolog [Cucurbita pepo subsp. pepo] >XP_023542748.1 protein GID8 homolog [Cucurbita pepo subsp. pepo] >KAG7012414.1 Glucose-induced degradation protein 8-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 467.2 bits (1201), Expect = 8.4e-128 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. NCBI nr
Match: XP_004146589.1 (protein GID8 homolog [Cucumis sativus] >XP_008442181.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_008442188.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_008442195.1 PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Cucumis melo] >XP_011653065.1 protein GID8 homolog [Cucumis sativus] >KGN64642.1 hypothetical protein Csa_013166 [Cucumis sativus]) HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127 Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. NCBI nr
Match: KAA0056956.1 (LisH domain-containing protein/CLTH domain-containing protein [Cucumis melo var. makuwa] >TYK26383.1 LisH domain-containing protein/CLTH domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127 Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. NCBI nr
Match: XP_038893683.1 (protein GID8 homolog [Benincasa hispida] >XP_038893684.1 protein GID8 homolog [Benincasa hispida]) HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. NCBI nr
Match: XP_022140081.1 (glucose-induced degradation protein 8 homolog [Momordica charantia]) HSP 1 Score: 461.1 bits (1185), Expect = 6.0e-126 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy Swiss-Prot
Match: Q84WK5 (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 2.9e-107 Identity = 204/241 (84.65%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy Swiss-Prot
Match: Q54X16 (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2) HSP 1 Score: 275.8 bits (704), Expect = 4.7e-73 Identity = 138/218 (63.30%), Postives = 170/218 (77.98%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy Swiss-Prot
Match: E7FGY2 (Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2) HSP 1 Score: 234.2 bits (596), Expect = 1.6e-60 Identity = 118/218 (54.13%), Postives = 165/218 (75.69%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy Swiss-Prot
Match: Q32L52 (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.0e-60 Identity = 114/218 (52.29%), Postives = 167/218 (76.61%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy Swiss-Prot
Match: Q5ZKQ7 (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.7e-60 Identity = 115/218 (52.75%), Postives = 165/218 (75.69%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy TrEMBL
Match: A0A6J1JZ68 (protein GID8 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490172 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.1e-128 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy TrEMBL
Match: A0A6J1GS04 (protein GID8 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456915 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.1e-128 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy TrEMBL
Match: A0A1S3B548 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486111 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.3e-128 Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy TrEMBL
Match: A0A5A7URR5 (LisH domain-containing protein/CLTH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00450 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.3e-128 Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. ExPASy TrEMBL
Match: A0A0A0LV19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073020 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.3e-128 Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg14647 vs. TAIR 10
Match: AT1G61150.1 (LisH and RanBPM domains containing protein ) HSP 1 Score: 389.4 bits (999), Expect = 2.1e-108 Identity = 204/241 (84.65%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of Carg14647 vs. TAIR 10
Match: AT1G61150.2 (LisH and RanBPM domains containing protein ) HSP 1 Score: 380.9 bits (977), Expect = 7.4e-106 Identity = 195/224 (87.05%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Carg14647 vs. TAIR 10
Match: AT1G61150.4 (LisH and RanBPM domains containing protein ) HSP 1 Score: 380.9 bits (977), Expect = 7.4e-106 Identity = 195/224 (87.05%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Carg14647 vs. TAIR 10
Match: AT1G61150.6 (LisH and RanBPM domains containing protein ) HSP 1 Score: 380.9 bits (977), Expect = 7.4e-106 Identity = 195/224 (87.05%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Carg14647 vs. TAIR 10
Match: AT1G61150.5 (LisH and RanBPM domains containing protein ) HSP 1 Score: 370.2 bits (949), Expect = 1.3e-102 Identity = 189/218 (86.70%), Postives = 202/218 (92.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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