Carg14642 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14642
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1218)
Location	Carg_Chr18: 2064154 .. 2066352 (+)
RNA-Seq Expression	Carg14642
Synteny	Carg14642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTTTCTTCTACCCGCGCTTAAAGAAAAGGCGAACAGAAAACAGAGTTATTGCAGAGCTCACGGCCCTTTGATTTTCCCATTCGTTCTCCTTATAAACCAATCTTTAAGTGAAATCCAGTAAGTTTTGAAGTTGTTTTTCTTCTCTTTTCTTTGAATTTTGAGTTTGGATTTCAGTTTGTTCGACGATTACCAAGTTTTTCTTGTTGTTTTCGTTCTTGGATTTCTCGTTGTAGTTACAGGAATTTGTTCTGTTTGTAAGGTTTTTTTAGATTGTCGGATCGTTGAGACATGGGTATGCTGGTTGTGGTTGTGGTGTTTGTCCTTGATTTGGTTGCTTTTGCGCTTGCTGTTGCTGCAGAGCAAAGAAGAACCACTGTAAGTTTTATGTATTTGTTTGAACAATATATTGATCTTTTATTCTTGGATGAATCTTATTTTTATGATAACTGTGATTGGAATTTTGAAACGCTTAGTGATTTTCATTTTGGATTATGCTCAAATGGCTGGTGACTTCTGGGATAATTTTTAAATTGGTGGCTTTTGTATAGGAACTCTCTATTGATTGGTTTAGGTCATGAGTTGTTTATTAGCTACAAATTTTGAACTTCTTCAAATCTTCAGAATCAAATGAAATATAATGAACTTGAAATGAAATATAATGAAGAGACAGATTTTAGCTAATAATTCTGCTTCATATGAGATGGAACGGATTATTACTTATCAAAGTGGAAAGCAAATCTGGTCATTAGTATATTTTGCACCCTGTAGCCTGCAGTAATCTAAGCCTCAAGAATCATTTTTTTTGTGTTAGGAGTTTAAACCATCATGGTTTCTGATTGTGAGACGAGTTGAGCATAATGATATTAGGTTAGGGCTCATGACTTGATCATAATGTTATTTGGAAGTGAAGACAGGTGTGGAGAATGAGTATGATGTGTGTATCTTACCTCCTTTGGCAGGCCACGGTGGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGACTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGGTTCTGTTTGCCAGCCAAGTGATCGTTATGGTGGCAAGTCGATGCTTATGCTGTGGGAAAGCTTTGCGACCGAGCGGTTCGAGGGCTTGGGCAATTACCCTTTTCATCACTTGCTGGTACATATGATTGCTTAACCTTCAAATTTTACTAGTTTTCTTGTGCTTGGCTTTGCAAAATCTGTAATGGATTGTATGACCCATAATAGGTCCCATTCTTCTACCCTTTCCCTGAGTCGATGACTATTCATACCTATTACCTTGACATCAAAGAAGAGGCCAAATGCTTTCTTTCTGTCTGAGTTGATCGTTCGAGATTAGAAATTTTTCCCCAATAACCGACTTTTGTCCATGAATCCTGCATATTTGATTCCATCCATAAATTTTCTTCCCTATCAGTTCGAGTCTCAGTATGAATGTTAATTCTTTCTGTTCATATATTATGATATGAATATACCACATCGGAGGATTCTAAAGTGCAACCTTCCCTCTTGATATAATATTTCTTTAACGGCTCTTCAATGTGTTGTAAATGGTCAAAATCATTGTACTCTGGTTTGAAATGCTTACTTTATGACACTCAAGATCATTAAACATGTTAGAATGTACAGAAAAACATAAAGCTGATCTATTACTTGTTGAATTTGAGCTAGACAAGACGTTGTTTTCAATTTCTGAGGATCAAAGTCAAACTCTGAACTTTATGTTTGGTATTGCATGGACATTTCAGGGTATGTTTTATCATTGCTGAGATCTGTCTGTTGGCTGCTTCGGTTCGAAATGCGTACCATACCAAGTATGTGAGTTCTATAATGAACGAGCGAATTTCGTGCAAGATGCTGAGGAGAGGAGTATTCGGGGCTGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATATTAGCTTTTCCAAGGCTCATAACCAGACGTCCTCCTTTGCTAAGGACACTGGCATTAGAATGGCAAGCATATAGAAGGCTAGGAGCTTCTTTATCAATTTGGGATTTATAGGATTTTGGTAAGTATGTTTGACTTGTTGATATGAAAAATGAACAACTGAGAGAGATAGATTACTTGTTGAACTCAGATGTACAAATATGATCATTTTATAGTTGACTGAAGATTTCATGTGGTGGTTTGTGTT

mRNA sequence

TTTCCTTTCTTCTACCCGCGCTTAAAGAAAAGGCGAACAGAAAACAGAGTTATTGCAGAGCTCACGGCCCTTTGATTTTCCCATTCGTTCTCCTTATAAACCAATCTTTAAGTGAAATCCAGTTTTTTTAGATTGTCGGATCGTTGAGACATGGGTATGCTGGTTGTGGTTGTGGTGTTTGTCCTTGATTTGGTTGCTTTTGCGCTTGCTGTTGCTGCAGAGCAAAGAAGAACCACTGCCACGGTGGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGACTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGGTTCTGTTTGCCAGCCAAGTGATCGTTATGGTGGCAAGTCGATGCTTATGCTGTGGGAAAGCTTTGCGACCGAGCGGTTCGAGGGCTTGGGCAATTACCCTTTTCATCACTTGCTGGGTATGTTTTATCATTGCTGAGATCTGTCTGTTGGCTGCTTCGGTTCGAAATGCGTACCATACCAAGTATGTGAGTTCTATAATGAACGAGCGAATTTCGTGCAAGATGCTGAGGAGAGGAGTATTCGGGGCTGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATATTAGCTTTTCCAAGGCTCATAACCAGACGTCCTCCTTTGCTAAGGACACTGGCATTAGAATGGCAAGCATATAGAAGGCTAGGAGCTTCTTTATCAATTTGGGATTTATAGGATTTTGGTAAGTATGTTTGACTTGTTGATATGAAAAATGAACAACTGAGAGAGATAGATTACTTGTTGAACTCAGATGTACAAATATGATCATTTTATAGTTGACTGAAGATTTCATGTGGTGGTTTGTGTT

Coding sequence (CDS)

ATGGGTATGCTGGTTGTGGTTGTGGTGTTTGTCCTTGATTTGGTTGCTTTTGCGCTTGCTGTTGCTGCAGAGCAAAGAAGAACCACTGCCACGGTGGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGACTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGGTTCTGTTTGCCAGCCAAGTGATCGTTATGGTGGCAAGTCGATGCTTATGCTGTGGGAAAGCTTTGCGACCGAGCGGTTCGAGGGCTTGGGCAATTACCCTTTTCATCACTTGCTGGGTATGTTTTATCATTGCTGAGATCTGTCTGTTGGCTGCTTCGGTTCGAAATGCGTACCATACCAAGTATGTGAGTTCTATAATGAACGAGCGAATTTCGTGCAAGATGCTGAGGAGAGGAGTATTCGGGGCTGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATATTAGCTTTTCCAAGGCTCATAACCAGACGTCCTCCTTTGCTAAGGACACTGGCATTAGAATGGCAAGCATATAG

Protein sequence

MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

Homology

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BLAST of Carg14642 vs. NCBI nr
Match: KAG6573252.1 (hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012419.1 hypothetical protein SDJN02_25171 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Carg14642 vs. NCBI nr
Match: XP_022954617.1 (uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 uncharacterized protein LOC111456828 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 2.6e-89
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCF+IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Carg14642 vs. NCBI nr
Match: XP_023542784.1 (uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo] >XP_023542785.1 uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           A+QVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCF+IAEICLLAASVRNAYHTKYV
Sbjct: 61  ATQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Carg14642 vs. NCBI nr
Match: XP_022994479.1 (uncharacterized protein LOC111490189 [Cucurbita maxima] >XP_022994480.1 uncharacterized protein LOC111490189 [Cucurbita maxima])

HSP 1 Score: 330.5 bits (846), Expect = 9.1e-87
Identity = 174/180 (96.67%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVV SGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVTSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLC GKALRPSGSRAWAITLFITCWVCF+IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCFGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRG+FGAGAAFIVFTCVASELFY+SFSKAHNQTSSFAKDTGIRMAS+
Sbjct: 121 SSIMNERISCKMLRRGIFGAGAAFIVFTCVASELFYVSFSKAHNQTSSFAKDTGIRMASM 180

[Close]

BLAST of Carg14642 vs. NCBI nr
Match: XP_038905949.1 (uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 uncharacterized protein LOC120091872 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 4.7e-83
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLV++VVF+ DLVAFALAVAAEQRRTTATVVQSG SKFCAYDSD+ATGLGVGSLL+LF
Sbjct: 2   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVVQSGTSKFCAYDSDVATGLGVGSLLILF 61

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCG+ LRP GSRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 62  ASQVIVMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 121

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SS+MNE+ISCKMLRRGVFGAGAAFIVFTC ASELFY+SFSKAH QTSSFAKDTGIRMAS+
Sbjct: 122 SSLMNEQISCKMLRRGVFGAGAAFIVFTCAASELFYVSFSKAHIQTSSFAKDTGIRMASL 181

[Close]

BLAST of Carg14642 vs. ExPASy TrEMBL
Match: A0A6J1GRF5 (uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC111456828 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCF+IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Carg14642 vs. ExPASy TrEMBL
Match: A0A6J1K1A5 (uncharacterized protein LOC111490189 OS=Cucurbita maxima OX=3661 GN=LOC111490189 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.4e-87
Identity = 174/180 (96.67%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVV SGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVTSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLC GKALRPSGSRAWAITLFITCWVCF+IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCFGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNERISCKMLRRG+FGAGAAFIVFTCVASELFY+SFSKAHNQTSSFAKDTGIRMAS+
Sbjct: 121 SSIMNERISCKMLRRGIFGAGAAFIVFTCVASELFYVSFSKAHNQTSSFAKDTGIRMASM 180

[Close]

BLAST of Carg14642 vs. ExPASy TrEMBL
Match: A0A1S3B5C0 (uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 160/180 (88.89%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLV++VVF+ DLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +T+SFAKDTGIRMAS+
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

[Close]

BLAST of Carg14642 vs. ExPASy TrEMBL
Match: A0A5A7UTY8 (DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00600 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 160/180 (88.89%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGMLV++VVF+ DLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSIMNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +T+SFAKDTGIRMAS+
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

[Close]

BLAST of Carg14642 vs. ExPASy TrEMBL
Match: A0A6J1CEZ1 (uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010632 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 160/180 (88.89%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           M MLV+VVVFV DLVAFALAVAAEQRRTTA VVQSGN++FCAYDSDIATGLGVGSLL LF
Sbjct: 1   MAMLVLVVVFVFDLVAFALAVAAEQRRTTAAVVQSGNTRFCAYDSDIATGLGVGSLLFLF 60

Query: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCF+IAE CLLAASVRNAYHTKY+
Sbjct: 61  ASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYM 120

Query: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180
           SSI+NE+ISCKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIVNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL 180

[Close]

BLAST of Carg14642 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53
Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 3   MLVVVVVFVLDLVAFALAVAAEQRRTTATVV-QSGNSKFCAYDSDIATGLGVGSLLVLFA 62
           +L++++VFV DL+AF LAVAAEQRRTT  +  +S +  +C YD DIATGLGVGS LVL A
Sbjct: 4   VLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRDLSYCVYDKDIATGLGVGSFLVLLA 63

Query: 63  SQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYVS 122
           SQ+++MVASRCLCCG+AL PSGSR+WAI LFIT WV F IA++CLLA SVRNAYHTKY  
Sbjct: 64  SQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKYRV 123

Query: 123 SIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 181
              N   SC+ LR+GVFGAGAAFIV T + SEL+Y++ S+A +   S  +D GIRM+S+
Sbjct: 124 YFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPS--RDPGIRMSSL 180

[Close]

BLAST of Carg14642 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 181.4 bits (459), Expect = 6.4e-46
Identity = 94/165 (56.97%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 4   LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKF--CAYDSDIATGLGVGSLLVLFA 63
           LV+++VF+LDL+A  LA+AAEQRR+   VV  G  +F  C Y SDIAT  G G+ ++LF 
Sbjct: 5   LVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFI 64

Query: 64  SQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKY-- 123
           SQVI+MVASRC CCGKAL+P GSRA  I LF+ CWV F+IAE+CLLA S+RNAYHT Y  
Sbjct: 65  SQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRR 124

Query: 124 VSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN 165
           + +I N   SC+++R+GVF AGA+F +FT + S+ +YIS+S+A +
Sbjct: 125 MWNIENPP-SCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARD 168

[Close]

BLAST of Carg14642 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 87/164 (53.05%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 4   LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFA 63
           LVV++VF+LDL+A  LA+AAEQRR+   V    + +  +C Y +DIAT  G G+ ++LF 
Sbjct: 5   LVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFV 64

Query: 64  SQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYVS 123
           SQV++M ASRC CCGK+L P GSRA AI LF+ CWV F+IAE+CLLAAS+RNAYHT+Y  
Sbjct: 65  SQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRK 124

Query: 124 S-IMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN 165
              + +  SC+++R+GVF AGAAF +FT + S+ +Y+ +S+A +
Sbjct: 125 MWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARD 168

[Close]

BLAST of Carg14642 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 169.1 bits (427), Expect = 3.3e-42
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 4   LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFA 63
           +V  +VFV +L+AF LAVAAEQRR+TA VVQ    +  +C YDSD ATG GVG+ L   A
Sbjct: 5   IVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVA 64

Query: 64  SQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYVS 123
           SQ+++M+ SRC CCGK L+P GSRA A+ LFI  W+ F+IAEICLLA SV NAYHTKY +
Sbjct: 65  SQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 124

Query: 124 SIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA 163
             M+    C+ LR+GVF AGA+F+ F  + S+ +Y  +  A
Sbjct: 125 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]

BLAST of Carg14642 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 74/161 (45.96%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 4   LVVVVVFVLDLVAFALAVAAEQRRTTATVVQS--GNSKFCAYDSDIATGLGVGSLLVLFA 63
           LV ++V  L LVAF  ++AAE+RR+    +Q    N+ FC YDSD+ATG GVG+ L L +
Sbjct: 9   LVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLS 68

Query: 64  SQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYVS 123
           S+ ++M  ++C+C G+ L P   RAW+I  FI+ W+ F++AE C++A + +NAYHTKY+S
Sbjct: 69  SESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS 128

Query: 124 SIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA 163
           S   +  SC  LR+G+F AGA FIV T V +  +Y+ F+K+
Sbjct: 129 S---QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Carg14642 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573252.1	1.5e-89	100.00	hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954617.1	2.6e-89	99.44	uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 unchar...	[more]
XP_023542784.1	5.7e-89	98.89	uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo] >XP_023542785....	[more]
XP_022994479.1	9.1e-87	96.67	uncharacterized protein LOC111490189 [Cucurbita maxima] >XP_022994480.1 uncharac...	[more]
XP_038905949.1	4.7e-83	90.00	uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 unchara...	[more]

BLAST of Carg14642 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg14642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRF5	1.2e-89	99.44	uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]
A0A6J1K1A5	4.4e-87	96.67	uncharacterized protein LOC111490189 OS=Cucurbita maxima OX=3661 GN=LOC111490189...	[more]
A0A1S3B5C0	1.5e-82	88.89	uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=...	[more]
A0A5A7UTY8	1.5e-82	88.89	DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1CEZ1	3.3e-82	88.89	uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of Carg14642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61065.1	1.1e-53	62.57	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	6.4e-46	56.97	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	2.3e-43	53.05	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	3.3e-42	54.66	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	1.5e-34	45.96	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 56..149 e-value: 1.1E-24 score: 86.8
None	No IPR available	PANTHER	PTHR31769:SF16	1,3-BETA-GLUCAN SYNTHASE COMPONENT (DUF1218)	coord: 3..179
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14642-RA	Carg14642-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane