Carg14625 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATATCTCTATTTTCATTATACTAACTATTCTTCGAAAAAACCAAAACTTATTAAGGTTCTCAAGTTTCCAACCATGGCGGACAACTTCATCCATTATTCAACATCGACCAAAACGGATAGAAAGATCGTAGAGATGAAGACCCTTTTCTCCACACTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGTTTCATTTTTTTTTCTTACTCTCTATATTTTTATCATGTTTAGATGATGAGAAAATTTGTTTAAATAACTCCGAGAAAATTTTGATTTACTTGTAGGAAGGTGAAACGACACTGCCGGTTCAATTAGAAAACGCCACAAATTACATAAGACAATTGAAGGAGAACGTAGAGAAATTGAAAGAGAAGAGAGAGAAGTTAATGAGATCACGAGAAGGTGAAATTAAAGCAAGATTATTGATGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGTTGGAGTTTCTCTTGACTACTGGATCTGATTATCACTTGGTTTTAAGTCAAATCCTTCAGTTGCTTCAAGAAAACGGAACTCAGATCGTCCATATCAATCACTCAACGATCATAGATCGGATTTTTCACAAGATAGTAGTTCAGGTAAGATAATACATCAAATGTGTTTGATTAATTACATGAATATATATATATATTATCCTCTCATTAATTACATAAATCAATTATAATGGGTAAGTAAGTTGATAATATTTGTGACAATTGAAAACTAGATGGTGGGAGAAGGGATGAACTCCGAAGGTGTTGATGGAGAAAGGATTTGTGAGACAGTGAAGAAGTTTGTTTCACAGTACAAAGATGGCAAATAGACCGTTTAATGTTTATCTAAAACATTGACCGATCTTGAAGATTTATGATGTTTTGCATTGTAACATGACGCTTTCGTTTGCATTGTAATACGACGCTTTAGAGCAGGTATAAATGCAAATCTATAATTTTTAAATGATGAACTTTCCTCACTAATTTTTGTTTAAAATAAAAGATCAATTTTTCTCATTATTCATATTAGATGTTCATTATTTATGTTTCTTAAATAACGAGTTCGTATTCAACGAGCTTTAACATCTTCAGAGCCCTAATCGATTTTTGAGATTATGGCTCGAGGTCCTAACTGGACCTCTTTGAGCTTGTCTTTGATTAGACTCATGGTCGGCTATTATTGGCCGTCCTAATCTTTGCTTCTGTTCTCATTTGACATTACACGAACANCCTGTCCCATAGCATGTGAAGTTAGACAAAGCTTTGTCGTCTAGGAAAACCCACCACTTTTAACATATGTGGTAGCTGAATCCTAGGGTTATGCGTCGTACTATTGTGTAGAGCACTTCTCGTCTTTATAGGTTGGATTAAAAAAAAAATTCAAATCTCTGTTTTAAAAACGCTCAAACGACTCTAAATCTTGTTAGATAACATGTATTGTATATAACTCGAGGCATTAGGCAAGTAGTCTAATGAGTTTCGTTTAAGCACTTCGACACTTGTTTCACCTACTTTCATTTTAGTAATGTTGTATATTAGGTTGATAATACGATAGTGAGAAATTAGAGTCTAAATATGTGATATCCTACATCGGTAGGAGAGGAGAACGAAACACCCTTGTGTGGAAATATTTCCCTAGCAAACGCGTTTTAAAGGCTCGAGGGGAAGCTCAAAAGGAAAAGTCCAAAGAGAACAATATCTGCTAGCGATGGACTTGGGCCGTTACAAAATAGATCAAACTCATTACATTAGAGAGACACTCAATACTACTAGAGATGTACATGTGGCAGAGAATGAAATATAAAAAAGTTTTCTTTCATCTTTGGACATATATGAAACTTAGAAATTGTTAAGGATATTTAGTAATATATTATAGTTTACCATATATATCATATTTGATATTTTATTATAAGGCAAATATCTAGATATTTGCCTTCTTACCATAGTTATCTTCCATTTATTACTCTTTACATATCCTTGTAATTTATTTGATTATAAATAAGATAATTTTCACACCATTTAGGTGTGGTGAATTATGCAAACATTCTCATGGTATCAGAGACCTTTCAGTTTAACAACCCCGATCTCTCATTTTCAATGGCTTCTGAATCTCCTACTCATCTTCTTTTCCACCACCCCTGCTGGCTTTGACGTCGCAAGGGCAGTCTCCATGACTACCACATGCGGAGCCAATTGATTACTCTTCGGCTCCACCCTTTTGACCTCCAAATCACCCTTCGCCATACTTTGTACATACAACCTCACCTTTTCCAACGAAATCGATTTTCTCTCAACCAACATAGTCTCTTTCATTTACTTCCCAATATTCCCTTCATCCTTCACAGAAACCCTAACCTAAACCTATCAACCTTTGCAGGGATTTACCTTTGGAATCTAGGCGCCGCACTGGCCTCTTCGCCAACCAAGTCGCCGTCGCCCTTCTAGCCAAAATTGGCCTCTTCGCCCACTGTATCGACTTTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCCTTCTACTTCTTGGGTTGACATATTCTCACTAGAGCCAAGGCAGGATCGTCGCTCAGCGACGATCCCTCTTCATGGGTTAGACATATTCTCACCAAAGCCAAGACAGCATCGCCACTGAGCGGCGATCCTTGTGCAATTTTCGATGGCCAAGAAAGTGTTTCTCTGCGCCTCCTCCGAACCAGGTTGTTGACATCTTCACGAAAAGTATTTCTCAACCTCTCTTTGAATTTTTCAGATCCAAGCTTCAGAGATTTACGTTCAATCTTCTGCAGAGATTTACCTTTCGAATCTGGGCGCCGCACTGGCCTCTTCGCCAACCAAGTCGTCACCGCCCTTCTAGCCAAAATTGGCTCCTTCGTCCACTGTGGCAACTCTTTCGGCTTCAACATTGTCTTTATCCCTTGCTCTAGGTATCCCCTTCTACTTTTTGGGTTGACATATTCTCACCAGAGCCAAGGTAGCATCGTCAGTAAGCGACGATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGTCAAGGCAGCATCGCCACTGAGCGACGATCCCTTTGCAGTTTTCGATGGCTAAGAAAGTGTTTCTCTATGCCTACTCTGAACTAGATTGTTGACATCTTCACGAAAAGTGTTTTTCAACCTCTTTGAATTTTTCAAATTCAAACTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGATGGGGTGTTAAGGATATTTAGTAATAAATTATATTTTACCATATATATCATATTTGATATTTTATTATAAGTCAAATATGTAGATATTTGTTCTTACCATAGTTATCTTTCCATTTATTGTTATTTTTATTTATTACTCTTTCCATATCAATTTATTTGATTATAAATAAAATAATTTTTCCACCCTTTAGGTGGGTAGATTAAACAAACATTCTCACATATGAAGCTTAAAAAAGTTTCTCTTTAGAGTGGGGTAGGTTGGAGAACTGGACGGGAACGAGAATAGAATCCCTATCCCCAGCCTCATTTATCTAACGAGGAGAAATATCTCCCCACTCACTCCCTCATTCTCGGTTTAAACAAAGAATGAGAGAGAATCTCCGCCCCATTTATCTAATGGGGAGAAATATCTCTCTACTCCCTCCCTTATTTCCCGTTTAAACGGAGAATCTCTTCCCCATTCAGAGCCGTTCCTCACGGGATCCCTCCTTCGTATGTTAAATAAACAACTCTAAATACTACCCTTACCAAGTTTGTCACTAATTCGATCTACACACTAACTTAAGATTAGAATGTGTCAAAAACAAAATGACATTAGAGTATCTTTTATGAAATTTACCACATGCTTCCATTTTAATTTTTTGGCTAAATTAATAAAAATATCCTTTAATTTTGTACTTTTTGATCTACTCTTAAACTTTCAAAATTTTAAAAATATCCTTAAACTCAAAAATATTCATATGGTTGAGGGGAAACGGTTAGTATTTTGTTTAAAAAAATGTCCTTAAATTTTGACCAGTGTTTTAAAAATATCCTTGAATTGAAAAAGTTTCATTAATATTCTCTATCGTTTTCCAATAGTCTTAACTCCTTCAACTTAATAAAAAAAATTCCAACCGTCAATATATGAACAAAAACGTCTTTTAATATTACTTTTGAAAGTTCAAAGTTACTTTTAAAACAAAATATGAATGATTTTTATCCCGAACTAACGTAAGGATATTTTTTTTCTTTTTTTGAAAGTTTAGTGATGTTTGTAAGACTCGAAAGTTTAAATATATTATTGAAACTTTTAAAAGTTTAAGAATATTTTTTAAACAATGTACAAAGTTTAAGAGTACTAAAAATTTTGAGTTCGTGTTAAACGACACAGGAACATTTATTCAAACTTGGGGTGATTTGATTTGATGTGGTTAGAAAGTTACCCAAAGTTGTGGTTGTGGTAGCACCAACAAACCCCCATTTGCTTTTATCTTCCCCTTTGTGTTCTTTACGTCACTTTTACAATTATTTAATATATAGATATCTATAAATCTTCCATATTTGTGTTGCAATGCTTCTGCTCCAGCCTCCATTTCTTTTGGTTCATGAACTCAAAGTTAAGTGAAAAAAAAAAAAAAAAAAACGTTTCCAAAATAATATATATGTGATTTCACCATTTTTTTTATTTTTTTATTTTTGAAGGTTTTCGAGCTCCCAACGATGGCGAACAACTTCATCCATTGTCCATCATCGGCAAAGATCGACCGAAAGCTCATCGAGAGAAATAGAAGAGCAGAAATGAAGGCCCTTTTCTCGAGGCTCCATTCTCTTGTCCCGAATCAAAGCTCAACGGTTTCTTTTTCATTTTTTTTTTCCTTACGGTTGTGTTTGGATGATGAGAGAATTTGTTTAAGTAACTCTGAGAAAATTTTGAGTTGTGTGCAGGAAGCTGAAACGACACTACTAGATCAGCTAGAAAACGCCACAAATTACATAAAACAATTGAAGGAGAACGTGGAGAAATTGAAAGAGAAGAAAGAGAAGCTCATGAAATTGGGAGAAGAAAGTGCAAGGAGTAGTGAAATTAAAGCAAGATTATTGGTGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGCTGGAGTTTCTTTTGACCACTAGATCTGATTATCATTTGGTTTTAAAACAAGTCCTTCAGCTGCTTGAAGAAAATGGAACTCAGATCGTCTATATCAATCACTCAACCGTCAAAGATCGGGTTTTTCACAAGATAATAGCTGAGGTAAGATAATGCATCAAATTTGTCTGATTAATTACATGAATCTATATATATATTATCCTCTAATTAATTACATAAATCAACTGTATTATGACACTTGAAAACTAGATGGTGGGAGAAGGAACGACCTCCGAAAGCATTGAAGGTGAAAGGATCTGTGAGACGGTGAAGAAGTTTGTTTCACAATACAAAGATGTCCAATACAATGTTTAATGTTTTGTCTACAACATCGACTGATTTTGAAGATTTATGATATCGTTCTGGTGTGGTTGAATGCTTCAAAATCTTAGTGTTCAAATCTTTCTCTAGTTTGCATTGTAACCTGACGTTTTAGGTGGTTTTCTCTCTTCAATAAATTAGGTCTTTATTTTAATTTAATCAATAATTACCATTTTATTTAGGTT TTTTATATCTCTATTTTCATTATACTAACTATTCTTCGAAAAAACCAAAACTTATTAAGGTTCTCAAGTTTCCAACCATGGCGGACAACTTCATCCATTATTCAACATCGACCAAAACGGATAGAAAGATCGTAGAGATGAAGACCCTTTTCTCCACACTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGAAGGTGAAACGACACTGCCGGTTCAATTAGAAAACGCCACAAATTACATAAGACAATTGAAGGAGAACGTAGAGAAATTGAAAGAGAAGAGAGAGAAGTTAATGAGATCACGAGAAGGTGAAATTAAAGCAAGATTATTGATGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGTTGGAGTTTCTCTTGACTACTGGATCTGATTATCACTTGGTTTTAAGTCAAATCCTTCAGTTGCTTCAAGAAAACGGAACTCAGATCGTCCATATCAATCACTCAACGATCATAGATCGGATTTTTCACAAGATAGTAGTTCAGATGGTGGGAGAAGGGATGAACTCCGAAGGTGTTGATGGAGAAAGGATTTGTGAGACAGTGAAGAAGTTTATCGACCGAAAGCTCATCGAGAGAAATAGAAGAGCAGAAATGAAGGCCCTTTTCTCGAGGCTCCATTCTCTTGTCCCGAATCAAAGCTCAACGGAAGCTGAAACGACACTACTAGATCAGCTAGAAAACGCCACAAATTACATAAAACAATTGAAGGAGAACGTGGAGAAATTGAAAGAGAAGAAAGAGAAGCTCATGAAATTGGGAGAAGAAAGTGCAAGGAGTAGTGAAATTAAAGCAAGATTATTGGTGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGCTGGAGTTTCTTTTGACCACTAGATCTGATTATCATTTGGTTTTAAAACAAGTCCTTCAGCTGCTTGAAGAAAATGGAACTCAGATCGTCTATATCAATCACTCAACCGTCAAAGATCGGGTTTTTCACAAGATAATAGCTGAGATGGTGGGAGAAGGAACGACCTCCGAAAGCATTGAAGGTGAAAGGATCTGTGAGACGGTGAAGAAGTTTGTTTCACAATACAAAGATGTCCAATACAATGTTTAATGTTTTGTCTACAACATCGACTGATTTTGAAGATTTATGATATCGTTCTGGTGTGGTTGAATGCTTCAAAATCTTAGTGTTCAAATCTTTCTCTAGTTTGCATTGTAACCTGACGTTTTAGGTGGTTTTCTCTCTTCAATAAATTAGGTCTTTATTTTAATTTAATCAATAATTACCATTTTATTTAGGTT ATGGCGGACAACTTCATCCATTATTCAACATCGACCAAAACGGATAGAAAGATCGTAGAGATGAAGACCCTTTTCTCCACACTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGAAGGTGAAACGACACTGCCGGTTCAATTAGAAAACGCCACAAATTACATAAGACAATTGAAGGAGAACGTAGAGAAATTGAAAGAGAAGAGAGAGAAGTTAATGAGATCACGAGAAGGTGAAATTAAAGCAAGATTATTGATGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGTTGGAGTTTCTCTTGACTACTGGATCTGATTATCACTTGGTTTTAAGTCAAATCCTTCAGTTGCTTCAAGAAAACGGAACTCAGATCGTCCATATCAATCACTCAACGATCATAGATCGGATTTTTCACAAGATAGTAGTTCAGATGGTGGGAGAAGGGATGAACTCCGAAGGTGTTGATGGAGAAAGGATTTGTGAGACAGTGAAGAAGTTTATCGACCGAAAGCTCATCGAGAGAAATAGAAGAGCAGAAATGAAGGCCCTTTTCTCGAGGCTCCATTCTCTTGTCCCGAATCAAAGCTCAACGGAAGCTGAAACGACACTACTAGATCAGCTAGAAAACGCCACAAATTACATAAAACAATTGAAGGAGAACGTGGAGAAATTGAAAGAGAAGAAAGAGAAGCTCATGAAATTGGGAGAAGAAAGTGCAAGGAGTAGTGAAATTAAAGCAAGATTATTGGTGCAAGTTGAAGCTCATCAAGTGGGTTCTTCGCTGGAGTTTCTTTTGACCACTAGATCTGATTATCATTTGGTTTTAAAACAAGTCCTTCAGCTGCTTGAAGAAAATGGAACTCAGATCGTCTATATCAATCACTCAACCGTCAAAGATCGGGTTTTTCACAAGATAATAGCTGAGATGGTGGGAGAAGGAACGACCTCCGAAAGCATTGAAGGTGAAAGGATCTGTGAGACGGTGAAGAAGTTTGTTTCACAATACAAAGATGTCCAATACAATGTTTAA MADNFIHYSTSTKTDRKIVEMKTLFSTLHSLVPNQSSTEGETTLPVQLENATNYIRQLKENVEKLKEKREKLMRSREGEIKARLLMQVEAHQVGSSLEFLLTTGSDYHLVLSQILQLLQENGTQIVHINHSTIIDRIFHKIVVQMVGEGMNSEGVDGERICETVKKFIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNYIKQLKENVEKLKEKKEKLMKLGEESARSSEIKARLLVQVEAHQVGSSLEFLLTTRSDYHLVLKQVLQLLEENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGERICETVKKFVSQYKDVQYNV Homology
BLAST of Carg14625 vs. NCBI nr
Match: KAG7012436.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 639.0 bits (1647), Expect = 2.3e-179 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
BLAST of Carg14625 vs. NCBI nr
Match: XP_022955188.1 (uncharacterized protein LOC111457229 [Cucurbita moschata]) HSP 1 Score: 322.8 bits (826), Expect = 3.6e-84 Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Carg14625 vs. NCBI nr
Match: KAG6573268.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 322.4 bits (825), Expect = 4.7e-84 Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Carg14625 vs. NCBI nr
Match: XP_023542777.1 (uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 316.6 bits (810), Expect = 2.6e-82 Identity = 170/176 (96.59%), Postives = 173/176 (98.30%), Query Frame = 0
BLAST of Carg14625 vs. NCBI nr
Match: KAG6573270.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 314.7 bits (805), Expect = 9.9e-82 Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-16 Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.3e-07 Identity = 49/157 (31.21%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05 Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy Swiss-Prot
Match: Q9XIJ1 (Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy TrEMBL
Match: A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84 Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy TrEMBL
Match: A0A6J1JZ96 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490190 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 7.4e-75 Identity = 150/170 (88.24%), Postives = 162/170 (95.29%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy TrEMBL
Match: A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73 Identity = 156/176 (88.64%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy TrEMBL
Match: A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 3.2e-62 Identity = 134/175 (76.57%), Postives = 152/175 (86.86%), Query Frame = 0
BLAST of Carg14625 vs. ExPASy TrEMBL
Match: A0A6J1GVE3 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111457231 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.3e-55 Identity = 127/172 (73.84%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of Carg14625 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17 Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 0
BLAST of Carg14625 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 5.9e-08 Identity = 49/157 (31.21%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Carg14625 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06 Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of Carg14625 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-05 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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