Carg14622 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14622
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	VQ motif-containing protein 4-like
Location	Carg_Chr18: 2182941 .. 2183570 (+)
RNA-Seq Expression	Carg14622
Synteny	Carg14622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTCTTCAATTCACCAACAAAACCCTTCTCCGCCGCCTCCAAAACCCATAACTCGATCCGAATCTGTAAACCCATATCCCACTACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAACAAGTAGTTCAAATGCTCACCGGATCTCCTCAAACTGCTAAGCAAGCTTCTGCTAAGCCGGTTTCCGGTGGTTCCAACGCTGATTCTGTGTCGAAAACGCACATTCCGCCTATGAAATCGTTGCCCAAAAGGCAGCAATCTGGGTTTAAGCTCTATGAGCGGAGGAACTCCTTGAATAAACTTAAAATTAACCCGTTGATTCCGGGGTTTGGTTCGAGTTGTAACTCTGGGTTTTCTCCGAGAAACCCTGAGATTCTTTCTCCTAGCATTTTGGATTTTCCGGCGCTCGCTCTTAGTCCGGTCACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGCGAATGCGAAATCGGAAGCTGAGGCGGAAGATAAAGCGATTAAAGAAAAGGGGTTTTACTTACATCCATCACCGACCACTACACCTCGAGAATCTGAGCCTCGGCTGTTGCCTCTGTTCCCATTGACATCGCCTAGAGTTCCAGGTTCTTCTTCCACTTCTTGA

mRNA sequence

ATGGAAGCCTCTTCAATTCACCAACAAAACCCTTCTCCGCCGCCTCCAAAACCCATAACTCGATCCGAATCTGTAAACCCATATCCCACTACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAACAAGTAGTTCAAATGCTCACCGGATCTCCTCAAACTGCTAAGCAAGCTTCTGCTAAGCCGGTTTCCGGTGGTTCCAACGCTGATTCTGTGTCGAAAACGCACATTCCGCCTATGAAATCGTTGCCCAAAAGGCAGCAATCTGGGTTTAAGCTCTATGAGCGGAGGAACTCCTTGAATAAACTTAAAATTAACCCGTTGATTCCGGGGTTTGGTTCGAGTTGTAACTCTGGGTTTTCTCCGAGAAACCCTGAGATTCTTTCTCCTAGCATTTTGGATTTTCCGGCGCTCGCTCTTAGTCCGGTCACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGCGAATGCGAAATCGGAAGCTGAGGCGGAAGATAAAGCGATTAAAGAAAAGGGGTTTTACTTACATCCATCACCGACCACTACACCTCGAGAATCTGAGCCTCGGCTGTTGCCTCTGTTCCCATTGACATCGCCTAGAGTTCCAGGTTCTTCTTCCACTTCTTGA

Coding sequence (CDS)

ATGGAAGCCTCTTCAATTCACCAACAAAACCCTTCTCCGCCGCCTCCAAAACCCATAACTCGATCCGAATCTGTAAACCCATATCCCACTACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAACAAGTAGTTCAAATGCTCACCGGATCTCCTCAAACTGCTAAGCAAGCTTCTGCTAAGCCGGTTTCCGGTGGTTCCAACGCTGATTCTGTGTCGAAAACGCACATTCCGCCTATGAAATCGTTGCCCAAAAGGCAGCAATCTGGGTTTAAGCTCTATGAGCGGAGGAACTCCTTGAATAAACTTAAAATTAACCCGTTGATTCCGGGGTTTGGTTCGAGTTGTAACTCTGGGTTTTCTCCGAGAAACCCTGAGATTCTTTCTCCTAGCATTTTGGATTTTCCGGCGCTCGCTCTTAGTCCGGTCACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGCGAATGCGAAATCGGAAGCTGAGGCGGAAGATAAAGCGATTAAAGAAAAGGGGTTTTACTTACATCCATCACCGACCACTACACCTCGAGAATCTGAGCCTCGGCTGTTGCCTCTGTTCCCATTGACATCGCCTAGAGTTCCAGGTTCTTCTTCCACTTCTTGA

Protein sequence

MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSPTTTPRESEPRLLPLFPLTSPRVPGSSSTS

Homology

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BLAST of Carg14622 vs. NCBI nr
Match: KAG7012439.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           TTTPRESEPRLLPLFPLTSPRVPGSSSTS
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPGSSSTS 209

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BLAST of Carg14622 vs. NCBI nr
Match: XP_022954873.1 (VQ motif-containing protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           TTTPRESEPRLLPLFPLTSPRVPG+ S S
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPGNVSVS 209

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BLAST of Carg14622 vs. NCBI nr
Match: XP_022954874.1 (VQ motif-containing protein 4-like isoform X2 [Cucurbita moschata] >KAG6573274.1 VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.9 bits (1021), Expect = 5.4e-107
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPG 205
           TTTPRESEPRLLPLFPLTSPRVPG
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPG 204

[Close]

BLAST of Carg14622 vs. NCBI nr
Match: XP_023542744.1 (VQ motif-containing protein 4-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023542745.1 VQ motif-containing protein 4-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           ME SSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 41  METSSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 100

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPP+KSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 101 PVSGGSNADSVSKTHIPPIKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 160

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 161 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 220

Query: 181 TTTPRESEPRLLPLFPLTSPRVPG 205
           TTTPRESEPRLLPLFPLTSPRVPG
Sbjct: 221 TTTPRESEPRLLPLFPLTSPRVPG 244

[Close]

BLAST of Carg14622 vs. NCBI nr
Match: XP_023542743.1 (VQ motif-containing protein 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-105
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           ME SSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 41  METSSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 100

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPP+KSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 101 PVSGGSNADSVSKTHIPPIKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 160

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 161 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 220

Query: 181 TTTPRESEPRLLPLFPLTSPRVP 204
           TTTPRESEPRLLPLFPLTSPRVP
Sbjct: 221 TTTPRESEPRLLPLFPLTSPRVP 243

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BLAST of Carg14622 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-60
Identity = 137/219 (62.56%), Postives = 161/219 (73.52%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASA- 60
           M +SS   + P+ P     TRSES NPYPTTFVQAD+SSFKQVVQMLTGS +  K  S+ 
Sbjct: 28  MSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSL 87

Query: 61  KPVSGGSNAD---SVSKTHIPPMKSLPKRQQ-----SGFKLYERRNSLNKLKINPLIPGF 120
           KP       D   + S   IPP+K++P ++Q     SGF+LYERRNS+  LKINPL P F
Sbjct: 88  KPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVF 147

Query: 121 GSSCNSGFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLAN-AKSEAEAEDKAIK 180
            +  NS FSPR PEILSPSILDFP+L LSPVTPLIPDPFDRSG +N + +E  AE+KA+K
Sbjct: 148 -NPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMK 207

Query: 181 EKGFYLHPSPTTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           E+GFYLHPSP TTP + EPRLLPLFP+TSPRV GSSS S
Sbjct: 208 ERGFYLHPSPATTPMDPEPRLLPLFPVTSPRVSGSSSAS 245

[Close]

BLAST of Carg14622 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37
Identity = 104/199 (52.26%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 19  ITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPP 78
           ITRS+    YPTTFVQADSSSFKQVVQMLTGS       S +P +  S   +     IPP
Sbjct: 29  ITRSDH---YPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFV---IPP 88

Query: 79  MKSLPKRQQSGFKLYERR-------NSLNKLKINPLIPGFGSSCNSGFSPRNPEILSPSI 138
           +K+   ++ SG KLYERR       N  N L IN L+ G G + +  FSPRN EILSPS 
Sbjct: 89  IKTAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSC 148

Query: 139 LDFPALAL-SPVTPLIP-------DPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSPTTT 198
           LDFP LAL SPVTPL         DPFD+       S    E++ I +KG+YLH SP +T
Sbjct: 149 LDFPKLALNSPVTPLKQGTNGNEGDPFDK------MSPLSEEERGIADKGYYLHRSPIST 208

Query: 199 PRESEPRLLPLFPLTSPRV 203
           PR+SEP+LLPLFP+TSPR+
Sbjct: 209 PRDSEPQLLPLFPVTSPRL 215

[Close]

BLAST of Carg14622 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-30
Identity = 108/241 (44.81%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESV------------NPYPTTFVQADSSSFKQVVQMLT 60
           M +     QNP P    P  + + +            NPYPTTFVQAD+S+FKQVVQMLT
Sbjct: 8   MSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVVQMLT 67

Query: 61  GS---PQTAKQASA-KPVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRN------S 120
           GS     T K   A  PV+  +   S S   IPP+K     + + FKLYERR       +
Sbjct: 68  GSSTDTTTGKHHEAPSPVNNNNKGSSFS---IPPIK-----KTNSFKLYERRQNNNNMFA 127

Query: 121 LNKLKINPL---------IPGFGSSCNSG--FSPRNPE-----ILSPSILDFPALAL-SP 180
            N L IN L           G  SS +    FSPRN       +LSPS+LDFP L L SP
Sbjct: 128 KNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNSP 187

Query: 181 VTPL--IPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSPTTTPRESEPRLLPLFPLTS 201
           VTPL    DPF++S   +  + +E EDKAI +KGFYLHPSP +TPR+S+P LLPLFP+ S
Sbjct: 188 VTPLRSNDDPFNKSSPLSLGNSSE-EDKAIADKGFYLHPSPVSTPRDSQPLLLPLFPVAS 239

[Close]

BLAST of Carg14622 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-28
Identity = 90/195 (46.15%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 20  TRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPPM 79
           TR    + Y TTF++ D SSFKQVVQ+LTG P   K  + +P        S     IPP+
Sbjct: 26  TRYVKDDMYETTFIRTDPSSFKQVVQLLTGIP---KNPTHQPDPRFPPFHS-----IPPI 85

Query: 80  KSLP-KRQQSGFKLYERRNSL-NKLKINPLIPGFGSSCNSGFSPRNPEILSPSILDFPAL 139
           K++  K+Q S F+L ERRNS+ + L INP   G             PEIL+P+IL+FPAL
Sbjct: 86  KAVTNKKQSSSFRLSERRNSMKHYLNINPTHSG------------PPEILTPTILNFPAL 145

Query: 140 ALSPVTPLIPDPFDRSG-LANAKSEA-----EAEDKAIKEKGFYLHPSPTTTPRESEPRL 199
            LSP TPL+ DPF R G  + + S++     + ++++IKEKGFYL PSP+TTPR++EPRL
Sbjct: 146 DLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRL 200

Query: 200 LPLFPLTSPRVPGSS 207
           L LFP+T    P  S
Sbjct: 206 LSLFPMTPIHSPAPS 200

[Close]

BLAST of Carg14622 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.9e-11
Identity = 70/179 (39.11%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 30  TTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPPMKSLPKRQQSG 89
           T FVQAD S+F+ +VQ LTG+P         P    S+  +VS  H   +   PK+    
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAP---------PDISSSSFSAVSAAH-QKLPLTPKK--PA 74

Query: 90  FKLYERRNSLNK--LKINPLIPGFGSSCNSGFSPRNPEILSPSILDFPALALSPVTPLIP 149
           FKL+ERR S  K  LK+N +     ++ N  FS  +   L           +SPV+ L  
Sbjct: 75  FKLHERRQSSKKMELKVNNI-----TNPNDAFSHFHRGFL-----------VSPVSHL-- 134

Query: 150 DPF-DRSGLANAKSEAEA-----EDKAIKEKGFYLHPSPTTTPRESEPRLLPLFPLTSP 201
           DPF  R    +A+ E  A     E KAI EKGFY  PSP  +  E  P LLPLFPL SP
Sbjct: 135 DPFWARVSPHSAREEHHAQPDKEEQKAIAEKGFYFLPSP-RSGSEPAPELLPLFPLRSP 162

[Close]

BLAST of Carg14622 vs. ExPASy TrEMBL
Match: A0A6J1GSB1 (VQ motif-containing protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457003 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.9e-108
Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           TTTPRESEPRLLPLFPLTSPRVPG+ S S
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPGNVSVS 209

[Close]

BLAST of Carg14622 vs. ExPASy TrEMBL
Match: A0A6J1GUB1 (VQ motif-containing protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457003 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.6e-107
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK
Sbjct: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPG 205
           TTTPRESEPRLLPLFPLTSPRVPG
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPG 204

[Close]

BLAST of Carg14622 vs. ExPASy TrEMBL
Match: A0A6J1JVX7 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490182 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.6e-104
Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAK 60
           ME SSIHQQNPSPP PKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQAS K
Sbjct: 1   METSSIHQQNPSPPLPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASVK 60

Query: 61  PVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNSGFS 120
           PVSGGSNADSVSKTHIPP+KSLPKRQQSGFKLYERRNSLNKLKINP IPGFGSSCNSGFS
Sbjct: 61  PVSGGSNADSVSKTHIPPIKSLPKRQQSGFKLYERRNSLNKLKINPSIPGFGSSCNSGFS 120

Query: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180
           PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP
Sbjct: 121 PRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSP 180

Query: 181 TTTPRESEPRLLPLFPLTSPRVPG 205
           TTTPRESEPRLLPLFPLTSPRVPG
Sbjct: 181 TTTPRESEPRLLPLFPLTSPRVPG 204

[Close]

BLAST of Carg14622 vs. ExPASy TrEMBL
Match: A0A6J1KRE6 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495788 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.7e-86
Identity = 175/220 (79.55%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 3   ASSIHQQNPSPPP-----PKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQA 62
           ++S   Q   PPP     PKPITRSESVNPYPTTFVQAD+SSFKQVVQMLTGSP+TAKQA
Sbjct: 38  STSYGLQQLMPPPHHLHSPKPITRSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQA 97

Query: 63  SAKPVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNS 122
           S  P +  SN+DSVSKTHIPP+KSLPKRQQSGFKLYERRNS+NKLKINP+ P FGS+ +S
Sbjct: 98  SVNPAAAPSNSDSVSKTHIPPIKSLPKRQQSGFKLYERRNSMNKLKINPVFPVFGSTTHS 157

Query: 123 GFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLA--------NAKSEAEAEDKAI 182
           GFSPR PEILSPSILDFPALALSPVTPLIPDPFDRSGLA        NAK +AEAE+KAI
Sbjct: 158 GFSPRKPEILSPSILDFPALALSPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAI 217

Query: 183 KEKGFYLHPSPTTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           KEKGFYLHPSPTTTPR+SEPRLLPLFP+TSPRVPGSSS S
Sbjct: 218 KEKGFYLHPSPTTTPRDSEPRLLPLFPMTSPRVPGSSSIS 257

[Close]

BLAST of Carg14622 vs. ExPASy TrEMBL
Match: A0A6J1EII3 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434386 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85
Identity = 174/220 (79.09%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 3   ASSIHQQNPSPPP-----PKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQA 62
           ++S   Q   PPP     PKPITRSESVNPYPTTFVQAD+SSFKQVVQMLTGSP+TAKQA
Sbjct: 35  STSYGLQQLMPPPHHLHSPKPITRSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQA 94

Query: 63  SAKPVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRNSLNKLKINPLIPGFGSSCNS 122
           S  P +  SN+DSVSKTHIPP+KSLPKRQQSGFKLYERRNS+NKLKINP+ P FGS+ +S
Sbjct: 95  SVNPAAAPSNSDSVSKTHIPPIKSLPKRQQSGFKLYERRNSMNKLKINPVFPVFGSTTHS 154

Query: 123 GFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLA--------NAKSEAEAEDKAI 182
           GFSPR PEILSPSILDFPALALSPVTPLIPDPFDRSGLA        NAK +AEAE+KAI
Sbjct: 155 GFSPRKPEILSPSILDFPALALSPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAI 214

Query: 183 KEKGFYLHPSPTTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           KEKGFYLHPSPTTTPR+ EPRLLPLFP+TSPRVPGSSS S
Sbjct: 215 KEKGFYLHPSPTTTPRDYEPRLLPLFPMTSPRVPGSSSIS 254

[Close]

BLAST of Carg14622 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 137/219 (62.56%), Postives = 161/219 (73.52%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASA- 60
           M +SS   + P+ P     TRSES NPYPTTFVQAD+SSFKQVVQMLTGS +  K  S+ 
Sbjct: 28  MSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSL 87

Query: 61  KPVSGGSNAD---SVSKTHIPPMKSLPKRQQ-----SGFKLYERRNSLNKLKINPLIPGF 120
           KP       D   + S   IPP+K++P ++Q     SGF+LYERRNS+  LKINPL P F
Sbjct: 88  KPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVF 147

Query: 121 GSSCNSGFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLAN-AKSEAEAEDKAIK 180
            +  NS FSPR PEILSPSILDFP+L LSPVTPLIPDPFDRSG +N + +E  AE+KA+K
Sbjct: 148 -NPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMK 207

Query: 181 EKGFYLHPSPTTTPRESEPRLLPLFPLTSPRVPGSSSTS 210
           E+GFYLHPSP TTP + EPRLLPLFP+TSPRV GSSS S
Sbjct: 208 ERGFYLHPSPATTPMDPEPRLLPLFPVTSPRVSGSSSAS 245

[Close]

BLAST of Carg14622 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.4e-59
Identity = 132/212 (62.26%), Postives = 156/212 (73.58%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASA- 60
           M +SS   + P+ P     TRSES NPYPTTFVQAD+SSFKQVVQMLTGS +  K  S+ 
Sbjct: 28  MSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSL 87

Query: 61  KPVSGGSNAD---SVSKTHIPPMKSLPKRQQ-----SGFKLYERRNSLNKLKINPLIPGF 120
           KP       D   + S   IPP+K++P ++Q     SGF+LYERRNS+  LKINPL P F
Sbjct: 88  KPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVF 147

Query: 121 GSSCNSGFSPRNPEILSPSILDFPALALSPVTPLIPDPFDRSGLAN-AKSEAEAEDKAIK 180
            +  NS FSPR PEILSPSILDFP+L LSPVTPLIPDPFDRSG +N + +E  AE+KA+K
Sbjct: 148 -NPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMK 207

Query: 181 EKGFYLHPSPTTTPRESEPRLLPLFPLTSPRV 203
           E+GFYLHPSP TTP + EPRLLPLFP+TSPRV
Sbjct: 208 ERGFYLHPSPATTPMDPEPRLLPLFPVTSPRV 238

[Close]

BLAST of Carg14622 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-38
Identity = 104/199 (52.26%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 19  ITRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPP 78
           ITRS+    YPTTFVQADSSSFKQVVQMLTGS       S +P +  S   +     IPP
Sbjct: 29  ITRSDH---YPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFV---IPP 88

Query: 79  MKSLPKRQQSGFKLYERR-------NSLNKLKINPLIPGFGSSCNSGFSPRNPEILSPSI 138
           +K+   ++ SG KLYERR       N  N L IN L+ G G + +  FSPRN EILSPS 
Sbjct: 89  IKTAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSC 148

Query: 139 LDFPALAL-SPVTPLIP-------DPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSPTTT 198
           LDFP LAL SPVTPL         DPFD+       S    E++ I +KG+YLH SP +T
Sbjct: 149 LDFPKLALNSPVTPLKQGTNGNEGDPFDK------MSPLSEEERGIADKGYYLHRSPIST 208

Query: 199 PRESEPRLLPLFPLTSPRV 203
           PR+SEP+LLPLFP+TSPR+
Sbjct: 209 PRDSEPQLLPLFPVTSPRL 215

[Close]

BLAST of Carg14622 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31
Identity = 108/241 (44.81%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 1   MEASSIHQQNPSPPPPKPITRSESV------------NPYPTTFVQADSSSFKQVVQMLT 60
           M +     QNP P    P  + + +            NPYPTTFVQAD+S+FKQVVQMLT
Sbjct: 8   MSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVVQMLT 67

Query: 61  GS---PQTAKQASA-KPVSGGSNADSVSKTHIPPMKSLPKRQQSGFKLYERRN------S 120
           GS     T K   A  PV+  +   S S   IPP+K     + + FKLYERR       +
Sbjct: 68  GSSTDTTTGKHHEAPSPVNNNNKGSSFS---IPPIK-----KTNSFKLYERRQNNNNMFA 127

Query: 121 LNKLKINPL---------IPGFGSSCNSG--FSPRNPE-----ILSPSILDFPALAL-SP 180
            N L IN L           G  SS +    FSPRN       +LSPS+LDFP L L SP
Sbjct: 128 KNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNSP 187

Query: 181 VTPL--IPDPFDRSGLANAKSEAEAEDKAIKEKGFYLHPSPTTTPRESEPRLLPLFPLTS 201
           VTPL    DPF++S   +  + +E EDKAI +KGFYLHPSP +TPR+S+P LLPLFP+ S
Sbjct: 188 VTPLRSNDDPFNKSSPLSLGNSSE-EDKAIADKGFYLHPSPVSTPRDSQPLLLPLFPVAS 239

[Close]

BLAST of Carg14622 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 127.9 bits (320), Expect = 9.7e-30
Identity = 90/195 (46.15%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 20  TRSESVNPYPTTFVQADSSSFKQVVQMLTGSPQTAKQASAKPVSGGSNADSVSKTHIPPM 79
           TR    + Y TTF++ D SSFKQVVQ+LTG P   K  + +P        S     IPP+
Sbjct: 26  TRYVKDDMYETTFIRTDPSSFKQVVQLLTGIP---KNPTHQPDPRFPPFHS-----IPPI 85

Query: 80  KSLP-KRQQSGFKLYERRNSL-NKLKINPLIPGFGSSCNSGFSPRNPEILSPSILDFPAL 139
           K++  K+Q S F+L ERRNS+ + L INP   G             PEIL+P+IL+FPAL
Sbjct: 86  KAVTNKKQSSSFRLSERRNSMKHYLNINPTHSG------------PPEILTPTILNFPAL 145

Query: 140 ALSPVTPLIPDPFDRSG-LANAKSEA-----EAEDKAIKEKGFYLHPSPTTTPRESEPRL 199
            LSP TPL+ DPF R G  + + S++     + ++++IKEKGFYL PSP+TTPR++EPRL
Sbjct: 146 DLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRL 200

Query: 200 LPLFPLTSPRVPGSS 207
           L LFP+T    P  S
Sbjct: 206 LSLFPMTPIHSPAPS 200

The following BLAST results are available for this feature:

BLAST of Carg14622 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012439.1	3.4e-109	100.00	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022954873.1	1.4e-107	98.56	VQ motif-containing protein 4-like isoform X1 [Cucurbita moschata]	[more]
XP_022954874.1	5.4e-107	100.00	VQ motif-containing protein 4-like isoform X2 [Cucurbita moschata] >KAG6573274.1...	[more]
XP_023542744.1	4.6e-106	99.02	VQ motif-containing protein 4-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_023542743.1	3.0e-105	99.01	VQ motif-containing protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg14622 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	3.0e-60	62.56	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9LDZ1	3.6e-37	52.26	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FHZ3	2.5e-30	44.81	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
O23660	1.4e-28	46.15	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9M8L3	9.9e-11	39.11	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]

BLAST of Carg14622 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSB1	6.9e-108	98.56	VQ motif-containing protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GUB1	2.6e-107	100.00	VQ motif-containing protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JVX7	4.6e-104	97.55	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490182 P...	[more]
A0A6J1KRE6	5.7e-86	79.55	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495788 P...	[more]
A0A6J1EII3	2.8e-85	79.09	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434386...	[more]

BLAST of Carg14622 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	2.1e-61	62.56	VQ motif-containing protein	[more]
AT1G28280.2	3.4e-59	62.26	VQ motif-containing protein	[more]
AT3G15300.1	2.6e-38	52.26	VQ motif-containing protein	[more]
AT5G53830.1	1.8e-31	44.81	VQ motif-containing protein	[more]
AT2G33780.1	9.7e-30	46.15	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 27..53 e-value: 1.4E-10 score: 40.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..89
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 5..206
IPR039827	VQ motif-containing protein 4/13	PANTHER	PTHR33402:SF16	VQ MOTIF-CONTAINING PROTEIN 13-RELATED	coord: 5..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14622-RA	Carg14622-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus