Carg14602 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14602
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	D-aminoacyl-tRNA deacylase
Location	Carg_Chr18: 2299483 .. 2301019 (-)
RNA-Seq Expression	Carg14602
Synteny	Carg14602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAGCGTAGCGAACCAGCTATTGTTCGCAGCCGGCGTAGTCGCCAAGCGAACTACACAGTTCAGCAGCACCAGAACGCAGCCGCTCAGATCCATGAGAGCTGTGGTTCAGAGAGTAGCCTCTGCAAGCGTCGAGGTCACCTTTCTCCTCTCTCTGGCTCTCTATCTCTCGTTGATTCTCTAAATCGCCGGTGTGAGATACTGCTTTTCGCAGGTCGATGGGCGCACCGTTTCGGAGATCGGGCCGGGCCTTCTCGTGCTCGTCGGCGTTCATGACTCCGACACCAATTCCGACGCCGAATACATGTACTCTTCTGTGCCTATAATACTCATTCTATGCTCAATTAAAACTTGTTCTTATCACGAACCTACTTCTTTTTTAATTTGGTTTCAGATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGTACCTCCAAGGCTTGGGACTTGAATGTAATCATATATACTCTCTTTTCGTCCATTTCAATCCGATTAATACCGACTAGGAGTGATCTACCACTGTTGTCTCTTTTGATTGTTTGAATCTTTGAAGAACTTGTAAGAATACGGCTTTTGGGATTAGGTTTTACCATTTTCCTTGATAAATTTTTGCAGGTAATGCAGAAGAACTACGAGGTTCTACTAGGTAAGTGCAGGGGAATTCCCCTTGAATTACAGAGAAGTTTAATGGTTTAGTTTTCTACTGAGAAATCGTAGCTAGAAAGTGAATTAGATTCAATCCACTAATGAAATTGCACTTGGTGGATTGAAACCAGTTAGTCAGTTTACACTCTATGGAATATTAAAGGGCAATAAGCCGGACTTTCATGTGGCAATGCCTCCACAAACTGCTAAGCCCTTCTACGCTTCTGTAGTTGAGAGGTTTGGAAAATCCTATAAACCAGATGCCATTAAAGGTAATCTATGCTTCATTCTTTCCCAAATTCCAGCTTTGATTTCTCTTCAGAATTGTAATGGGTTCAATGAATAGAACAATGAGTATACTGAATCTTGTCTTTGTTCCCTTTTCTTGTGGGCAGATGGAGTGTTTGGAGCAAAGATGAAGGTAATCTCAATATGCTCTTTTGAGTCCCAAGTGATTATGATAGTTATTAGATTGATCAGTTCTTATATTTTTGTCACTGATGTTTGAGAAGGTCAATTTGGTGAATGATGGGCCTGTCACAATGCAGATTGACTCCAAACCGTCCAAGTAAGGTAATCAACTAACTTAGGAGCTTGCTTGCCTCATGCAGGGTGTTAGGGAGGTAGTAATATTACAGTGATTTTCATTTACTTTCATTTCTGGAGTACAGTTGAATGAACATTTACTCCAAGTTCCAACCATGTTAAGTATAGCATCAAAAAAAACTTCTATTCCTTTCTTGCCAAATGCTCTTATAAACTTTTTCCATACATGCTTTGTGAGATCCTACATCGATCGAAGAGGGAAACACAACATTCTTTATCAGGGTGTGAAAACCTCTCCGTATTAGGCAAGGGAACAAAGCATTTTTTTTT

mRNA sequence

AAAAAAAAAAAAAGCGTAGCGAACCAGCTATTGTTCGCAGCCGGCGTAGTCGCCAAGCGAACTACACAGTTCAGCAGCACCAGAACGCAGCCGCTCAGATCCATGAGAGCTGTGGTTCAGAGAGTAGCCTCTGCAAGCGTCGAGGTCGATGGGCGCACCGTTTCGGAGATCGGGCCGGGCCTTCTCGTGCTCGTCGGCGTTCATGACTCCGACACCAATTCCGACGCCGAATACATATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGTACCTCCAAGGCTTGGGACTTGAATGTAATCATATATACTCTCTTTTCGTCCATTTCAATCCGATTAATACCGACTAGGAGTGATCTACCACTGTTGTCTCTTTTGATTGTAATGCAGAAGAACTACGAGGTTCTACTAGTTAGTCAGTTTACACTCTATGGAATATTAAAGGGCAATAAGCCGGACTTTCATGTGGCAATGCCTCCACAAACTGCTAAGCCCTTCTACGCTTCTGTAGTTGAGAGGTTTGGAAAATCCTATAAACCAGATGCCATTAAAGATGGAGTGTTTGGAGCAAAGATGAAGGTCAATTTGGTGAATGATGGGCCTGTCACAATGCAGATTGACTCCAAACCGTCCAAGTAAGGTAATCAACTAACTTAGGAGCTTGCTTGCCTCATGCAGGGTGTTAGGGAGGTAGTAATATTACAGTGATTTTCATTTACTTTCATTTCTGGAGTACAGTTGAATGAACATTTACTCCAAGTTCCAACCATGTTAAGTATAGCATCAAAAAAAACTTCTATTCCTTTCTTGCCAAATGCTCTTATAAACTTTTTCCATACATGCTTTGTGAGATCCTACATCGATCGAAGAGGGAAACACAACATTCTTTATCAGGGTGTGAAAACCTCTCCGTATTAGGCAAGGGAACAAAGCATTTTTTTTT

Coding sequence (CDS)

AAAAAAAAAAAAAGCGTAGCGAACCAGCTATTGTTCGCAGCCGGCGTAGTCGCCAAGCGAACTACACAGTTCAGCAGCACCAGAACGCAGCCGCTCAGATCCATGAGAGCTGTGGTTCAGAGAGTAGCCTCTGCAAGCGTCGAGGTCGATGGGCGCACCGTTTCGGAGATCGGGCCGGGCCTTCTCGTGCTCGTCGGCGTTCATGACTCCGACACCAATTCCGACGCCGAATACATATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGTACCTCCAAGGCTTGGGACTTGAATGTAATCATATATACTCTCTTTTCGTCCATTTCAATCCGATTAATACCGACTAGGAGTGATCTACCACTGTTGTCTCTTTTGATTGTAATGCAGAAGAACTACGAGGTTCTACTAGTTAGTCAGTTTACACTCTATGGAATATTAAAGGGCAATAAGCCGGACTTTCATGTGGCAATGCCTCCACAAACTGCTAAGCCCTTCTACGCTTCTGTAGTTGAGAGGTTTGGAAAATCCTATAAACCAGATGCCATTAAAGATGGAGTGTTTGGAGCAAAGATGAAGGTCAATTTGGTGAATGATGGGCCTGTCACAATGCAGATTGACTCCAAACCGTCCAAGTAA

Protein sequence

KKKKSVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK

Homology

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BLAST of Carg14602 vs. NCBI nr
Match: KAG7012459.1 (D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   KKKKSVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPG 60
           KKKKSVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPG
Sbjct: 1   KKKKSVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPG 60

Query: 61  LLVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRS 120
           LLVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRS
Sbjct: 61  LLVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRS 120

Query: 121 DLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSY 180
           DLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSY
Sbjct: 121 DLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSY 180

Query: 181 KPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           KPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK
Sbjct: 181 KPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 214

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BLAST of Carg14602 vs. NCBI nr
Match: XP_011653368.2 (D-aminoacyl-tRNA deacylase [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 7.1e-78
Identity = 160/216 (74.07%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 1   KKKKSVANQLLFAAGVVAKRTT--QFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIG 60
           K+  SVAN  LFAA V  KRTT  +FS+ + +P+RSMRAVVQRVASASV+VDGRTVSEIG
Sbjct: 45  KRMNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIG 104

Query: 61  PGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPT 120
           PGLLVLVG+HDSD+++DAEYICRKVLNMRLFPNEST KAWDLN                 
Sbjct: 105 PGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLN----------------- 164

Query: 121 RSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGK 180
                      VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGK
Sbjct: 165 -----------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGK 224

Query: 181 SYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           SY PDAIKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 225 SYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 232

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BLAST of Carg14602 vs. NCBI nr
Match: KGN64710.1 (hypothetical protein Csa_014221 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-77
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTT--QFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLL 64
           SVAN  LFAA V  KRTT  +FS+ + +P+RSMRAVVQRVASASV+VDGRTVSEIGPGLL
Sbjct: 3   SVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPGLL 62

Query: 65  VLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDL 124
           VLVG+HDSD+++DAEYICRKVLNMRLFPNEST KAWDLN                     
Sbjct: 63  VLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLN--------------------- 122

Query: 125 PLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKP 184
                  VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY P
Sbjct: 123 -------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 182

Query: 185 DAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           DAIKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 186

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BLAST of Carg14602 vs. NCBI nr
Match: XP_038894530.1 (D-aminoacyl-tRNA deacylase [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 157/210 (74.76%), Postives = 168/210 (80.00%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLVL 64
           SVAN  LFAA V  KRTT F + + QP+RSMRAVVQRVASASVEVDGRTVSEIGPGLLVL
Sbjct: 3   SVANLPLFAASVSTKRTTLFGNNKLQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVL 62

Query: 65  VGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDLPL 124
           VG+HDSD+++DAEYICRKVLNMRLFPNEST++AWDLN                       
Sbjct: 63  VGLHDSDSDADAEYICRKVLNMRLFPNESTARAWDLN----------------------- 122

Query: 125 LSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPDA 184
                VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPP  AKPFYASVVERFGKSY PD 
Sbjct: 123 -----VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPLRAKPFYASVVERFGKSYNPDL 182

Query: 185 IKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           IKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 IKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 184

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BLAST of Carg14602 vs. NCBI nr
Match: XP_022140203.1 (D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 1.3e-76
Identity = 156/210 (74.29%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLVL 64
           SVAN  L+AA V  KRT   S+ +TQP RSMRAVVQRV SASV+VDGRTVSEIGPGLLVL
Sbjct: 3   SVANLPLYAASVGTKRTRLLSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPGLLVL 62

Query: 65  VGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDLPL 124
           VG+H+SD+++DAEYICRKVLNMRLFPNEST KAWDLN                       
Sbjct: 63  VGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLN----------------------- 122

Query: 125 LSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPDA 184
                VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY PDA
Sbjct: 123 -----VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDA 182

Query: 185 IKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           IKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 IKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 184

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BLAST of Carg14602 vs. ExPASy Swiss-Prot
Match: Q54EY1 (D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39
Identity = 84/177 (47.46%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           M+A++QRV S+SV V+G  +SEI  GL+ L+G+   DT  DAEYI RK+LN+RL+ NE  
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
           +K WD +                            V Q +YE+L VSQFTL+  LKGNK 
Sbjct: 61  TKNWDRS----------------------------VQQMDYEILFVSQFTLFAQLKGNKQ 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSK 212
            +H+AM P+ +K FY   +E   KSYKP+ IKDG FGA M V L+NDGPVT+Q+DSK
Sbjct: 121 SYHLAMAPELSKQFYLDFLENAKKSYKPEKIKDGRFGAMMDVQLINDGPVTIQLDSK 149

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BLAST of Carg14602 vs. ExPASy Swiss-Prot
Match: F1QGC8 (D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 81/179 (45.25%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           M+A++QRV  ASV V    +S IG GL VL+G+   DT  D +Y+ RK+LN+R+F +E+ 
Sbjct: 1   MKAIIQRVTRASVTVGEEQISSIGRGLCVLLGISVEDTQKDVDYMVRKILNLRVFEDEN- 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
            +AW                   +RS         VM    EVL VSQFTL  +LKGNKP
Sbjct: 61  GRAW-------------------SRS---------VMDGELEVLCVSQFTLQCLLKGNKP 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPS 214
           D+H AMP + A+PFY +++E+  ++YKP+ IKDG FGAKM+V + NDGPVT+Q++S P+
Sbjct: 121 DYHAAMPAELAQPFYNNMLEQLRETYKPELIKDGQFGAKMQVLIQNDGPVTIQLESPPA 150

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BLAST of Carg14602 vs. ExPASy Swiss-Prot
Match: Q8TEA8 (D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 80/176 (45.45%), Postives = 110/176 (62.50%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
            K W  +                            VM K YE+L VSQFTL  +LKGNKP
Sbjct: 61  GKHWSKS----------------------------VMDKQYEILCVSQFTLQCVLKGNKP 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDS 211
           DFH+AMP + A+ FY S +E+  K+Y+P+ IKDG FGA M+V++ NDGPVT++++S
Sbjct: 121 DFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Carg14602 vs. ExPASy Swiss-Prot
Match: Q9DD18 (D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-35
Identity = 80/176 (45.45%), Postives = 110/176 (62.50%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES- 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
            K W  +                            VM K YEVL VSQFTL  +LKGNKP
Sbjct: 61  GKHWSKS----------------------------VMDKEYEVLCVSQFTLQCVLKGNKP 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDS 211
           DFH+AMP + A+ FY S +E+  KSY+P+ I+DG FGA M+V++ NDGPVT++++S
Sbjct: 121 DFHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Carg14602 vs. ExPASy Swiss-Prot
Match: Q2T9V8 (D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-35
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
            K W  +                            VM K YEVL VSQFTL  +LKGNKP
Sbjct: 61  GKHWSKS----------------------------VMDKQYEVLCVSQFTLQCVLKGNKP 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDS 211
           DFH+AMP + A+ FY   +E+  K+Y+P+ +KDG FGA M+V++ NDGPVT++++S
Sbjct: 121 DFHLAMPAEQAESFYKGFLEQLRKAYRPELVKDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Carg14602 vs. ExPASy TrEMBL
Match: A0A0A0LS01 (D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.6e-78
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTT--QFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLL 64
           SVAN  LFAA V  KRTT  +FS+ + +P+RSMRAVVQRVASASV+VDGRTVSEIGPGLL
Sbjct: 3   SVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPGLL 62

Query: 65  VLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDL 124
           VLVG+HDSD+++DAEYICRKVLNMRLFPNEST KAWDLN                     
Sbjct: 63  VLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLN--------------------- 122

Query: 125 PLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKP 184
                  VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY P
Sbjct: 123 -------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 182

Query: 185 DAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           DAIKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 186

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BLAST of Carg14602 vs. ExPASy TrEMBL
Match: A0A6J1CHG7 (D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.4e-77
Identity = 156/210 (74.29%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLVL 64
           SVAN  L+AA V  KRT   S+ +TQP RSMRAVVQRV SASV+VDGRTVSEIGPGLLVL
Sbjct: 3   SVANLPLYAASVGTKRTRLLSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPGLLVL 62

Query: 65  VGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDLPL 124
           VG+H+SD+++DAEYICRKVLNMRLFPNEST KAWDLN                       
Sbjct: 63  VGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLN----------------------- 122

Query: 125 LSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPDA 184
                VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY PDA
Sbjct: 123 -----VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDA 182

Query: 185 IKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           IKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 IKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 184

[Close]

BLAST of Carg14602 vs. ExPASy TrEMBL
Match: A0A5A7UU37 (D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002050 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-76
Identity = 157/213 (73.71%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQF---SSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGL 64
           SVAN  LFAA V  KRTT F   ++ +  P+RSMRAVVQRVASASV+VDGRTVSEIGPGL
Sbjct: 3   SVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGPGL 62

Query: 65  LVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSD 124
           LVLVG+H+SD+++DAEYICRKVLNMRLFPNEST KAWDLN                    
Sbjct: 63  LVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLN-------------------- 122

Query: 125 LPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYK 184
                   VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY 
Sbjct: 123 --------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYN 182

Query: 185 PDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           PDAIKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 PDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 187

[Close]

BLAST of Carg14602 vs. ExPASy TrEMBL
Match: A0A1S3B6T2 (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-76
Identity = 157/213 (73.71%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQF---SSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGL 64
           SVAN  LFAA V  KRTT F   ++ +  P+RSMRAVVQRVASASV+VDGRTVSEIGPGL
Sbjct: 3   SVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGPGL 62

Query: 65  LVLVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSD 124
           LVLVG+H+SD+++DAEYICRKVLNMRLFPNEST KAWDLN                    
Sbjct: 63  LVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLN-------------------- 122

Query: 125 LPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYK 184
                   VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGKSY 
Sbjct: 123 --------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYN 182

Query: 185 PDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           PDAIKDGVFGA MKVNLVNDGPVTMQIDS+PSK
Sbjct: 183 PDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 187

[Close]

BLAST of Carg14602 vs. ExPASy TrEMBL
Match: A0A6J1EH34 (D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.2e-76
Identity = 159/211 (75.36%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 5   SVANQLLFAAGVVAKRTTQFSSTR-TQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLV 64
           SVA   LFAA V  KRTT FS+ R  QP+RSMRAVVQRVASASVEVDGRTVSEIGPGLLV
Sbjct: 3   SVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLV 62

Query: 65  LVGVHDSDTNSDAEYICRKVLNMRLFPNESTSKAWDLNVIIYTLFSSISIRLIPTRSDLP 124
           LVG+HDSD+ SDAEYICRKVLNMRLFPN+ST KAWDLN                      
Sbjct: 63  LVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN---------------------- 122

Query: 125 LLSLLIVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPD 184
                 VMQKNYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYASVVERFGK Y PD
Sbjct: 123 ------VMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPD 182

Query: 185 AIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 215
           AIKDGVFGA MKVNLVNDGPVTMQI+S+PSK
Sbjct: 183 AIKDGVFGAMMKVNLVNDGPVTMQIESQPSK 185

[Close]

BLAST of Carg14602 vs. TAIR 10
Match: AT4G18460.1 (D-Tyr-tRNA(Tyr) deacylase family protein )

HSP 1 Score: 238.4 bits (607), Expect = 5.2e-63
Identity = 120/179 (67.04%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 35  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTNSDAEYICRKVLNMRLFPNEST 94
           MRAV+QRV+S+SV VDGR VSEIGPGLLVL+G+H+SDT SDA+YICRKVLNMRLF NE+T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 95  SKAWDLNVIIYTLFSSISIRLIPTRSDLPLLSLLIVMQKNYEVLLVSQFTLYGILKGNKP 154
            K WD N                            VMQ+NY VLLVSQFTLYG LKGNKP
Sbjct: 61  GKGWDQN----------------------------VMQRNYGVLLVSQFTLYGFLKGNKP 120

Query: 155 DFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPS 214
           DFHVAMPP  AKPFYAS+VE+F K+Y PDA+KDGVFGA M+VNLVNDGPVTMQ+DS  S
Sbjct: 121 DFHVAMPPDKAKPFYASLVEKFQKAYNPDAVKDGVFGAMMQVNLVNDGPVTMQLDSPQS 151

The following BLAST results are available for this feature:

BLAST of Carg14602 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012459.1	2.2e-111	100.00	D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_011653368.2	7.1e-78	74.07	D-aminoacyl-tRNA deacylase [Cucumis sativus]	[more]
KGN64710.1	1.6e-77	75.00	hypothetical protein Csa_014221 [Cucumis sativus]	[more]
XP_038894530.1	2.1e-77	74.76	D-aminoacyl-tRNA deacylase [Benincasa hispida]	[more]
XP_022140203.1	1.3e-76	74.29	D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia]	[more]

BLAST of Carg14602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54EY1	1.4e-39	47.46	D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1	[more]
F1QGC8	1.2e-35	45.25	D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1	[more]
Q8TEA8	2.0e-35	45.45	D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2	[more]
Q9DD18	2.6e-35	45.45	D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2	[more]
Q2T9V8	3.4e-35	44.89	D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1	[more]

BLAST of Carg14602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS01	7.6e-78	75.00	D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1	[more]
A0A6J1CHG7	6.4e-77	74.29	D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 S...	[more]
A0A5A7UU37	2.4e-76	73.71	D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B6T2	2.4e-76	73.71	D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1	[more]
A0A6J1EH34	3.2e-76	75.36	D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV...	[more]

BLAST of Carg14602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18460.1	5.2e-63	67.04	D-Tyr-tRNA(Tyr) deacylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	GENE3D	3.50.80.10		coord: 35..213 e-value: 2.2E-57 score: 195.5
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	SUPERFAMILY	69500	DTD-like	coord: 34..210
IPR003732	D-aminoacyl-tRNA deacylase DTD	PFAM	PF02580	Tyr_Deacylase	coord: 36..209 e-value: 3.0E-46 score: 157.5
IPR003732	D-aminoacyl-tRNA deacylase DTD	PANTHER	PTHR10472	D-TYROSYL-TRNA TYR DEACYLASE	coord: 35..213
IPR003732	D-aminoacyl-tRNA deacylase DTD	HAMAP	MF_00518	Deacylase_Dtd	coord: 35..210 score: 26.97043
None	No IPR available	PANTHER	PTHR10472:SF5	D-AMINOACYL-TRNA DEACYLASE 1	coord: 35..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14602-RA	Carg14602-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0051499	D-aminoacyl-tRNA deacylase activity