Carg14569 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14569
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF1685 domain-containing protein
LocationCarg_Chr18: 2499573 .. 2500226 (-)
RNA-Seq ExpressionCarg14569
SyntenyCarg14569
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCTTGAGCAACTTCTAAATCTCTTCAATTCCGTCTGGTTTGAGCGTGAAATTTTCAACAACCACCCCTTTTCATCTAACCCCCAAAACCCACAACCAGAAAATCCCTTAAAAAACCCGCCGCCGCCGGAGGAGGAGGAGGAGGAGCCTTTCGTCCGACAGATTCGAACGAGGTCAATAAGCGAATACTTAGCCTCCAAATTGAGCTTTATGTCCAATTCCAACTCACCCAATTCAGTTCTGTTTTCGCCAAAACTTCAAACGATGGCCGGAAACGAGTCGCCGGAGAACAGCCAGAGAGGAAATGAACGGCGGCCGGAAACAGAGTTGAGAATGAAATGGTCGGAAAGTAGGAGCTTGTCGGAGCTGGAATTCGAGGAGCTAAAAGGGTTTATGGATATGGGATTTGTTTTCACGGAGGAGGATAAAGATTCTAGCTTGGCGTGGATTGTTCCGGCATTGAACAGAGGCCGGAAGGAAGGAGAAGAAGAGATGGGTGGGGAAATTTTGAGGCCTTATCTTTCGGAAGCTTGGGAAGCTATGGAGTTGAGGAAGCCATTGATGAAGAAATGGAGGTTTCCTGGTAATGAGACTGATATGAAGGATAATCTCAAATGGTGGGCTCATGCTGTGGCTTCTACCGTTAGATGA

mRNA sequence

ATGGACCTTGAGCAACTTCTAAATCTCTTCAATTCCGTCTGGTTTGAGCGTGAAATTTTCAACAACCACCCCTTTTCATCTAACCCCCAAAACCCACAACCAGAAAATCCCTTAAAAAACCCGCCGCCGCCGGAGGAGGAGGAGGAGGAGCCTTTCGTCCGACAGATTCGAACGAGGTCAATAAGCGAATACTTAGCCTCCAAATTGAGCTTTATGTCCAATTCCAACTCACCCAATTCAGTTCTGTTTTCGCCAAAACTTCAAACGATGGCCGGAAACGAGTCGCCGGAGAACAGCCAGAGAGGAAATGAACGGCGGCCGGAAACAGAGTTGAGAATGAAATGGTCGGAAAGTAGGAGCTTGTCGGAGCTGGAATTCGAGGAGCTAAAAGGGTTTATGGATATGGGATTTGTTTTCACGGAGGAGGATAAAGATTCTAGCTTGGCGTGGATTGTTCCGGCATTGAACAGAGGCCGGAAGGAAGGAGAAGAAGAGATGGGTGGGGAAATTTTGAGGCCTTATCTTTCGGAAGCTTGGGAAGCTATGGAGTTGAGGAAGCCATTGATGAAGAAATGGAGGTTTCCTGGTAATGAGACTGATATGAAGGATAATCTCAAATGGTGGGCTCATGCTGTGGCTTCTACCGTTAGATGA

Coding sequence (CDS)

ATGGACCTTGAGCAACTTCTAAATCTCTTCAATTCCGTCTGGTTTGAGCGTGAAATTTTCAACAACCACCCCTTTTCATCTAACCCCCAAAACCCACAACCAGAAAATCCCTTAAAAAACCCGCCGCCGCCGGAGGAGGAGGAGGAGGAGCCTTTCGTCCGACAGATTCGAACGAGGTCAATAAGCGAATACTTAGCCTCCAAATTGAGCTTTATGTCCAATTCCAACTCACCCAATTCAGTTCTGTTTTCGCCAAAACTTCAAACGATGGCCGGAAACGAGTCGCCGGAGAACAGCCAGAGAGGAAATGAACGGCGGCCGGAAACAGAGTTGAGAATGAAATGGTCGGAAAGTAGGAGCTTGTCGGAGCTGGAATTCGAGGAGCTAAAAGGGTTTATGGATATGGGATTTGTTTTCACGGAGGAGGATAAAGATTCTAGCTTGGCGTGGATTGTTCCGGCATTGAACAGAGGCCGGAAGGAAGGAGAAGAAGAGATGGGTGGGGAAATTTTGAGGCCTTATCTTTCGGAAGCTTGGGAAGCTATGGAGTTGAGGAAGCCATTGATGAAGAAATGGAGGTTTCCTGGTAATGAGACTGATATGAAGGATAATCTCAAATGGTGGGCTCATGCTGTGGCTTCTACCGTTAGATGA

Protein sequence

MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRSISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR
Homology
BLAST of Carg14569 vs. NCBI nr
Match: KAG7012491.1 (hypothetical protein SDJN02_25243, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 432.2 bits (1110), Expect = 2.7e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60
           MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS
Sbjct: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60

Query: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRS 120
           ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRS
Sbjct: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRS 120

Query: 121 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 180
           LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE
Sbjct: 121 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 180

Query: 181 AMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           AMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR
Sbjct: 181 AMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 217

BLAST of Carg14569 vs. NCBI nr
Match: XP_022954447.1 (uncharacterized protein LOC111456711 [Cucurbita moschata])

HSP 1 Score: 428.7 bits (1101), Expect = 3.0e-116
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60
           MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS
Sbjct: 34  MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 93

Query: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRS 120
           ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSES+S
Sbjct: 94  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESKS 153

Query: 121 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 180
           LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE
Sbjct: 154 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 213

Query: 181 AMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           AMELR PLMKKWRFPGNETDMKDNLKWWAHAVASTVR
Sbjct: 214 AMELRMPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 250

BLAST of Carg14569 vs. NCBI nr
Match: KAG6573322.1 (hypothetical protein SDJN03_27209, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPP---EEEEEEPFVRQIR 60
           MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPP   EEEEEEPFVRQIR
Sbjct: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEEEEPFVRQIR 60

Query: 61  TRSISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSE 120
           TRSISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNE RPETELRMKWSE
Sbjct: 61  TRSISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNEPRPETELRMKWSE 120

Query: 121 SRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSE 180
           S+SLSELEFEELKGFMDMGFVFT EDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSE
Sbjct: 121 SKSLSELEFEELKGFMDMGFVFT-EDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSE 180

Query: 181 AWEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           AWEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR
Sbjct: 181 AWEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 219

BLAST of Carg14569 vs. NCBI nr
Match: XP_023542166.1 (uncharacterized protein LOC111802131 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.0 bits (1055), Expect = 6.4e-111
Identity = 209/219 (95.43%), Postives = 212/219 (96.80%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNP--PPPEEEEEEPFVRQIRT 60
           MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLK P  PPPEEEEEEPFVRQIRT
Sbjct: 34  MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKTPPSPPPEEEEEEPFVRQIRT 93

Query: 61  RSISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSES 120
           RSISEYL SKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERR +TELRM+WSES
Sbjct: 94  RSISEYLTSKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRRKTELRMEWSES 153

Query: 121 RSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEA 180
           +SLSELEFEELKGFMDMGFVF EEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEA
Sbjct: 154 KSLSELEFEELKGFMDMGFVFMEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEA 213

Query: 181 WEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           WEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVAS VR
Sbjct: 214 WEAMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASIVR 252

BLAST of Carg14569 vs. NCBI nr
Match: XP_038895996.1 (uncharacterized protein LOC120084174 [Benincasa hispida])

HSP 1 Score: 275.8 bits (704), Expect = 3.2e-70
Identity = 164/245 (66.94%), Postives = 183/245 (74.69%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPF-VRQIRTR 60
           MD EQLLNLF+S WFE EIFN HPF SNPQNPQPEN   + P      +EPF V ++RTR
Sbjct: 1   MDFEQLLNLFDSFWFEHEIFNKHPFPSNPQNPQPENQDNSLP------KEPFIVPRLRTR 60

Query: 61  SISEYLASKLSFMSNSNSPNSVLFSPKLQT------MAGNESPENSQR-GNERRPETE-- 120
           SISE L+SKLSFMSNSNSP+SVLFSPKLQT      +AG ESPENS++ G ERRP+TE  
Sbjct: 61  SISEDLSSKLSFMSNSNSPDSVLFSPKLQTIFSSKDIAGAESPENSRKVGIERRPKTESR 120

Query: 121 -----LRMKWSESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRK----- 180
                 RM+ SESRSLSELEFEELKGFMD+GFVF+EEDK SSLA IVP LNR  K     
Sbjct: 121 RKLRGRRMRRSESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKTEEED 180

Query: 181 ---EGEEEMGGEILRPYLSEAWEAM-----ELRKPLMKKWRFPGNETDMKDNLKWWAHAV 218
              E E ++GGEI RPYLSEAWEAM     EL+ PL  KW+FP N+ DMKDNLKWWAHAV
Sbjct: 181 IEEEEERKLGGEISRPYLSEAWEAMEEEEEELKNPLTMKWKFPSNQIDMKDNLKWWAHAV 239

BLAST of Carg14569 vs. ExPASy TrEMBL
Match: A0A6J1GR10 (uncharacterized protein LOC111456711 OS=Cucurbita moschata OX=3662 GN=LOC111456711 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60
           MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS
Sbjct: 34  MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 93

Query: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESRS 120
           ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSES+S
Sbjct: 94  ISEYLASKLSFMSNSNSPNSVLFSPKLQTMAGNESPENSQRGNERRPETELRMKWSESKS 153

Query: 121 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 180
           LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE
Sbjct: 154 LSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNRGRKEGEEEMGGEILRPYLSEAWE 213

Query: 181 AMELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           AMELR PLMKKWRFPGNETDMKDNLKWWAHAVASTVR
Sbjct: 214 AMELRMPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 250

BLAST of Carg14569 vs. ExPASy TrEMBL
Match: A0A6J1EH41 (uncharacterized protein LOC111434058 OS=Cucurbita moschata OX=3662 GN=LOC111434058 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.5e-68
Identity = 155/239 (64.85%), Postives = 180/239 (75.31%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPEN----PLKNPPPPEEEEEEPFVRQI 60
           MD+EQ+L+LF+S+WFEREIFN HPF +NPQNP+PEN    PLKN PP     EEPFV +I
Sbjct: 1   MDVEQVLDLFDSLWFEREIFNKHPFPTNPQNPRPENQDRDPLKNSPP-----EEPFVPRI 60

Query: 61  RTRSISEYLASKLSFMSNSNSPNSVLFSPKLQT------MAGNESPENSQRGNERRPETE 120
             RSISE L+SKL+FMS+S+SP+SVLFSPKLQT      +AG E PE S+R   R+   +
Sbjct: 61  CPRSISEDLSSKLTFMSDSSSPDSVLFSPKLQTILSSKEIAGEEPPEKSRRVVIRQKRKQ 120

Query: 121 LR------MKWSESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNR--GRKEG 180
            R      ++ SESRSLSELEFEE+KGFMD+GFVF+E DK SSLAWIVP LNR   R E 
Sbjct: 121 RRRIGGRSIRGSESRSLSELEFEEVKGFMDLGFVFSEGDKSSSLAWIVPGLNRLGKRDEE 180

Query: 181 EEEMGGEILRPYLSEAWEAM----ELRKPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 218
           EEE+GG I RPYLSEAW AM    EL+K L+ KWR P NE DMKDNLKWWAHAVASTVR
Sbjct: 181 EEELGGGISRPYLSEAWAAMEEEEELKKALVMKWRLPANEIDMKDNLKWWAHAVASTVR 234

BLAST of Carg14569 vs. ExPASy TrEMBL
Match: A0A6J1KR35 (uncharacterized protein LOC111495710 OS=Cucurbita maxima OX=3661 GN=LOC111495710 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.6e-67
Identity = 155/246 (63.01%), Postives = 179/246 (72.76%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPEN----PLKNPPPPEEEEEEPFVRQI 60
           MD+EQ+LNLF+S WFEREIFN HPF +NPQNP+PEN    PLKN PP     EEPFV +I
Sbjct: 1   MDVEQVLNLFDSFWFEREIFNKHPFPTNPQNPRPENQDRDPLKNSPP-----EEPFVPRI 60

Query: 61  RTRSISEYLASKLSFMSNSNSPNSVLFSPKLQT------MAGNESPENSQRGNERRPETE 120
             RSISE L+SKL+FMS+S+SP+SVLFSPKLQT      +AG E PE S+R   R+   +
Sbjct: 61  CPRSISEDLSSKLTFMSDSSSPDSVLFSPKLQTILSSKDIAGEEPPEKSRRVVIRQKRKQ 120

Query: 121 LR------MKWSESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNR------- 180
            R      ++ SESRSLSELEFEELKGFMD+GFVF+E DK SSLAWIVP LNR       
Sbjct: 121 RRRIGGRSIRGSESRSLSELEFEELKGFMDLGFVFSEGDKSSSLAWIVPGLNRLGKRDEE 180

Query: 181 --GRKEGEEEMGGEILRPYLSEAWEAM----ELRKPLMKKWRFPGNETDMKDNLKWWAHA 218
               +E EEE+GG I RPYLSEAW AM    E++K L+ KWR P NE DMKDNLKWWAHA
Sbjct: 181 EEEEEEEEEELGGGISRPYLSEAWAAMEQEEEVKKALVMKWRLPANEIDMKDNLKWWAHA 240

BLAST of Carg14569 vs. ExPASy TrEMBL
Match: A0A0A0LV26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.3e-64
Identity = 154/255 (60.39%), Postives = 178/255 (69.80%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60
           MD + LLNLF+S WF+R++ NNHPF SNPQ  QP+    +P P    +E   + ++RTRS
Sbjct: 1   MDFDHLLNLFDSFWFQRQVLNNHPFPSNPQILQPQIQDPDPLP----KESFLIPRLRTRS 60

Query: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQT------MAGNESPENSQRGN-ERRPETELRM 120
           ISE L+SKLSFMSNSNSP+SVL SPKLQT      +AG ESPE S +   ERRP+TE R 
Sbjct: 61  ISEDLSSKLSFMSNSNSPDSVLLSPKLQTIFSSKDIAGAESPETSHKVEIERRPKTEYRR 120

Query: 121 KW-------SESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNR-------GR 180
           +        SESRSLSELEFEELKGFMD+GFVF+EEDK SSLA IVP LNR       G 
Sbjct: 121 RLRGRRTRRSESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKREEKGN 180

Query: 181 KEGEEE---------MGGEILRPYLSEAWEAME--------LRKPLMKKWRFPGNETDMK 218
           KEGEEE         +GGEI RPYLSEAWEA+         L++PLM KWRFP N+ DMK
Sbjct: 181 KEGEEEEEEKEEERKLGGEISRPYLSEAWEAIAEEEEKEELLKRPLMMKWRFPSNQIDMK 240

BLAST of Carg14569 vs. ExPASy TrEMBL
Match: A0A5A7UPL7 (DUF1685 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002460 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.0e-62
Identity = 154/253 (60.87%), Postives = 179/253 (70.75%), Query Frame = 0

Query: 1   MDLEQLLNLFNSVWFEREIFNNHPFSSNPQNPQPENPLKNPPPPEEEEEEPFVRQIRTRS 60
           MD EQLLNLF+S WFER +FN HPF SN Q PQ ++P   P      +E   + ++ TRS
Sbjct: 1   MDFEQLLNLFDSFWFERGVFNKHPFLSNLQ-PQIQDPDSLP------KESFIIPRLPTRS 60

Query: 61  ISEYLASKLSFMSNSNSPNSVLFSPKLQT------MAGNESPENSQRGN-ERRPETELRM 120
           ISE L+SKLSFMS+SNSP+SVLFSPKLQT      +AG ESPE S++   ERRP+TE R 
Sbjct: 61  ISEDLSSKLSFMSSSNSPDSVLFSPKLQTIFSSKDIAGAESPETSRKLEIERRPKTEYRR 120

Query: 121 KW-------SESRSLSELEFEELKGFMDMGFVFTEEDKDSSLAWIVPALNR-GRKEGEE- 180
           ++       SESRSLSELEFEELKGFMD+GFVF+EEDK SSLA IVP LNR G+KE +E 
Sbjct: 121 RFRGRRTRRSESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKKEEKES 180

Query: 181 ------------EMGGEILRPYLSEAWEAME--------LRKPLMKKWRFPGNETDMKDN 218
                       ++GGEI RPYLSEAWEAME         +KPLM KWRFP N+ DMKDN
Sbjct: 181 KEEEEEEEEEERKLGGEISRPYLSEAWEAMEEEEEKEELAKKPLMMKWRFPSNQIDMKDN 240

BLAST of Carg14569 vs. TAIR 10
Match: AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 95/265 (35.85%), Postives = 137/265 (51.70%), Query Frame = 0

Query: 4   EQLLNLFNSVWFEREIFNNHPFSSNPQNPQP--ENPLKNPPPPEEEEEEPFVRQIRTRSI 63
           E+LL LF   W ER IF     + N ++ +   E  +      EE  +   V  +  R++
Sbjct: 4   EELLKLFEQNWSERPIFKKDKENLNGKSREKRGEKEILEERREEEALKNFPVSFLVERAM 63

Query: 64  SE----YLASKLSFMSNSN-----SPNSVL----FSPKLQT-MAGNE------------S 123
           S+      +SK S  S+S+     SP SVL       KLQT ++G E             
Sbjct: 64  SDETMMTTSSKTSLFSSSSDDLFLSPRSVLPVKPTPMKLQTILSGKEVNAFTIAERERLL 123

Query: 124 PENSQRGNERRPETELRMKWSESRSLSELEFEELKGFMDMGFVFTEED-KDSSLAWIVPA 183
            E  ++  +++ ++ +R +  + +S+S+LE+EELKGFMD+GFVF+E+D KDS L  I+P 
Sbjct: 124 SEKEEQRKKKKKKSNVRTR--KGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPG 183

Query: 184 LNR--------GRKEGEEEM-----GGEILRPYLSEAWEAMELRKPLMK-----KWRFP- 218
           L R         ++E EEE      G    RPYLSEAW+    RK   +     KWR P 
Sbjct: 184 LQRLVKKDDGVTKEEEEEEEEDKIGGNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPA 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7012491.12.7e-117100.00hypothetical protein SDJN02_25243, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022954447.13.0e-11699.08uncharacterized protein LOC111456711 [Cucurbita moschata][more]
KAG6573322.11.2e-11297.27hypothetical protein SDJN03_27209, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023542166.16.4e-11195.43uncharacterized protein LOC111802131 [Cucurbita pepo subsp. pepo][more]
XP_038895996.13.2e-7066.94uncharacterized protein LOC120084174 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GR101.4e-11699.08uncharacterized protein LOC111456711 OS=Cucurbita moschata OX=3662 GN=LOC1114567... [more]
A0A6J1EH415.5e-6864.85uncharacterized protein LOC111434058 OS=Cucurbita moschata OX=3662 GN=LOC1114340... [more]
A0A6J1KR353.6e-6763.01uncharacterized protein LOC111495710 OS=Cucurbita maxima OX=3661 GN=LOC111495710... [more]
A0A0A0LV266.3e-6460.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1[more]
A0A5A7UPL72.0e-6260.87DUF1685 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
AT2G42760.11.5e-2035.85unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012881Protein of unknown function DUF1685PFAMPF07939DUF1685coord: 126..156
e-value: 1.0E-4
score: 22.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..114
NoneNo IPR availablePANTHERPTHR31865OSJNBA0071G03.3 PROTEINcoord: 6..217
NoneNo IPR availablePANTHERPTHR31865:SF29BNAA04G24650D PROTEINcoord: 6..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14569-RACarg14569-RAmRNA