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Carg14556 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGTGCCGTTCTTCTTCCCTTCGGTTTCCTTCCATTAATTCCATTTCTCTGATTCGCCCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGGTAGAGTTTCTTTTGATGTGTTTTATCTCTTGCTTTCGGTTCTTATGTTTTTGGTGTTTCTTGGTTCGTTTTTTTTTTTTTCCCCTTTTTGTGGGAAATTTTAGGAGACTTCAGGTGAAAACCGTTCGATATAGCTTTAAGAAATTGAAATTTCTTCCATGTTTTGTAGTGGTTTAGTTACCTTGGTCTTGTTCTATTTAATTCGAAGAGCACTGAGACAAAGAAGGGATTGGGATTGCGAGGGCTGCAGAGAAGGGGCTTATTGATGGAGAAAATGTGAAAGAAAAATATTCTTTTCGCGTGTAATGAAGGAATCGAGTTTATGGGCTAATGTTCTTGATATTTGCTTGCAATTAAAGGTCTAAAATCTATGCTGCGATGTTTCTGCTATCTGCGTTGTCCTGTTCTTGTGTGTACTTCCAAACCCTCTTAGGGTTTTATTTGGGAGTTCTGTTGAACACTTCACTTTTTACGTTCATATACATAGTCTTTGTGAATTTTCTCAGATTTAGTCTGAAATACTTTGACTATATCCTGGTGTGTAGACCTAAGAATCAGACAGGAGTAAGACATACTTGCAATTTTACCAACTATGGTGTTAGAAAATTGCTTTGAATTTATATAAACAGCCGCTTCTGCCAATTCATCTGGACTTTATTATCCTTCGGCGATTTATTTCAGCAACTTAAATTTCGATGAGTTTGGATGTTCATTTGATGTAGCGATTTTCATGTTGTTTTCCTTTCTTGTTTTGCAGCTATGGTTACTTTTTTAGCTTACCATCTTTGCCTCCTTCCTTCTTGTTCGTTCTATTTTGTGGTGTTCACTGATTACCAGAGTTTTTGACATCGTAAATTATACTTTTTGAATAAAGTACCATGGGTTAAATTAGGACCCATGTTATGAGTGATCACTCACTTGGATTCGATGTCCTACTATTGTCTCGTGAGAATAGTCGAAGATGCATATAAGCCGACCCGTAAACTTAGTGATTTCCATAAAAAGGAGAATCTTTTTAACATAATAGAAAGTTGGTGAAGCATTTGCGTACGTGGTATGCTTCTGAAACGTTCCTGTCTAGATGCTTATTCCGTTTGCTTTTATATTGTTGACAATCCTTCTTTTGTTTGTGAATGTAATGTTTAGTTTCCGGGTCCGTTCGTTACTTATAATTATAAATGGTTACTTCACTAAGACATTGACAAAAGTTTCTACTTGCAAGTACTACATCTTTTGTATTTAATAGGTTGTTAACTTATGTCTCTATTGTCTTTTTGTTTTCACTTTCCCTCAGATTGGTTGACCCATTTGTTCGTGTTTGTTTCCCTCATTTTTTTAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGGTACTATGAACTGCACATACAATTTGACACGAGCAAAATATTTGAGACACTAGTCTTTTATCTCTAACAATCAGTTACTTCCATCCAGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGTAATAGCCACTAAACCAATAGTTACTAGATTTTCATCAATACAATACTCTGTTCTTGCACACGCAATGAACTTCATTTGTGAACAATAATCTTACTCATGTTCAATGGTGGAAATTGTTTGCTGTTCGGATTCTGTTCGTTCATCAGTTAATGTCTCTGCATCCCGTTCTCTTTTTTCTGGTTAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGTATGTACGCTGCCACATAGGTTTCATTTGCATTTCTTGTGGTTAGAACTCGAATCTTTTGTTTCGTGTTTCTGATATCATGTTGTTTCTTGTTCAGGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGATCAGTATGGCAGGAGGATACTCGTCCGTCCTAAATGTGCAAAGCATGCTCTGCATCAGCATGTTAATCTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCTTGAGATATGGGACAGGATGATGCTCCTCTACAATCAAATGATGTTTTAGCTTGATCCGAATATTAAAATTTGATCTGGGTGATAAATTATACGAAATAACATAACATTCAAGTCGATCTTTAAACTAAAATCTCTT GCGGTGCCGTTCTTCTTCCCTTCGGTTTCCTTCCATTAATTCCATTTCTCTGATTCGCCCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGATCAGTATGGCAGGAGGATACTCGTCCGTCCTAAATGTGCAAAGCATGCTCTGCATCAGCATGTTAATCTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCTTGAGATATGGGACAGGATGATGCTCCTCTACAATCAAATGATGTTTTAGCTTGATCCGAATATTAAAATTTGATCTGGGTGATAAATTATACGAAATAACATAACATTCAAGTCGATCTTTAAACTAAAATCTCTT ATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGA MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV Homology
BLAST of Carg14556 vs. NCBI nr
Match: XP_022994876.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita maxima] >XP_023541524.1 eukaryotic translation initiation factor 4E-1-like [Cucurbita pepo subsp. pepo] >KAG6573340.1 hypothetical protein SDJN03_27227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012504.1 hypothetical protein SDJN02_25256 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 497.7 bits (1280), Expect = 5.6e-137 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Carg14556 vs. NCBI nr
Match: XP_022954765.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata]) HSP 1 Score: 496.1 bits (1276), Expect = 1.6e-136 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of Carg14556 vs. NCBI nr
Match: KAG6583931.1 (hypothetical protein SDJN03_19863, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-130 Identity = 224/235 (95.32%), Postives = 227/235 (96.60%), Query Frame = 0
BLAST of Carg14556 vs. NCBI nr
Match: XP_022927466.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata] >KAG7019546.1 hypothetical protein SDJN02_18507 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-130 Identity = 224/235 (95.32%), Postives = 227/235 (96.60%), Query Frame = 0
BLAST of Carg14556 vs. NCBI nr
Match: ACN51299.1 (eukaryotic translation inititation factor 4E [Citrullus lanatus] >ACN51301.1 eukaryotic translation inititation factor 4E [Citrullus lanatus] >AJA90795.1 eukaryotic translation inititation factor 4E [Citrullus lanatus]) HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129 Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy Swiss-Prot
Match: O23252 (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana OX=3702 GN=EIF4E1 PE=1 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 4.4e-92 Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy Swiss-Prot
Match: P48599 (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.3e-88 Identity = 159/236 (67.37%), Postives = 182/236 (77.12%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy Swiss-Prot
Match: O81481 (Eukaryotic translation initiation factor 4E-1 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 7.3e-87 Identity = 152/224 (67.86%), Postives = 176/224 (78.57%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy Swiss-Prot
Match: P29557 (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum OX=4565 PE=1 SV=3) HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83 Identity = 144/212 (67.92%), Postives = 172/212 (81.13%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy Swiss-Prot
Match: Q9C7P2 (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana OX=3702 GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 281.6 bits (719), Expect = 8.3e-75 Identity = 122/188 (64.89%), Postives = 149/188 (79.26%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy TrEMBL
Match: A0A6J1K0I1 (mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111490469 PE=3 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 2.7e-137 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy TrEMBL
Match: A0A6J1GTC0 (mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111456920 PE=3 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 7.9e-137 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy TrEMBL
Match: A0A6J1EHS1 (mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111434284 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130 Identity = 224/235 (95.32%), Postives = 227/235 (96.60%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy TrEMBL
Match: C7SG33 (mRNA cap-binding protein OS=Citrullus lanatus OX=3654 GN=eIF4E PE=2 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 7.2e-130 Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 0
BLAST of Carg14556 vs. ExPASy TrEMBL
Match: A0A6J1KIP4 (mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111495592 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129 Identity = 222/235 (94.47%), Postives = 226/235 (96.17%), Query Frame = 0
BLAST of Carg14556 vs. TAIR 10
Match: AT4G18040.1 (eukaryotic translation initiation factor 4E ) HSP 1 Score: 339.0 bits (868), Expect = 3.1e-93 Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 0
BLAST of Carg14556 vs. TAIR 10
Match: AT1G29590.1 (Eukaryotic initiation factor 4E protein ) HSP 1 Score: 281.6 bits (719), Expect = 5.9e-76 Identity = 122/188 (64.89%), Postives = 149/188 (79.26%), Query Frame = 0
BLAST of Carg14556 vs. TAIR 10
Match: AT1G29590.2 (Eukaryotic initiation factor 4E protein ) HSP 1 Score: 281.2 bits (718), Expect = 7.7e-76 Identity = 121/188 (64.36%), Postives = 149/188 (79.26%), Query Frame = 0
BLAST of Carg14556 vs. TAIR 10
Match: AT1G29550.1 (Eukaryotic initiation factor 4E protein ) HSP 1 Score: 279.3 bits (713), Expect = 2.9e-75 Identity = 121/188 (64.36%), Postives = 148/188 (78.72%), Query Frame = 0
BLAST of Carg14556 vs. TAIR 10
Match: AT5G35620.1 (Eukaryotic initiation factor 4E protein ) HSP 1 Score: 205.7 bits (522), Expect = 4.1e-53 Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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